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List of works by Frédéric Mahé

Assignment of 3 genetic linkage groups to 3 chromosomes of narrow-leafed lupin

scientific article

Browsing repeats in genomes: Pygram and an application to non-coding region analysis

scientific article published on 26 October 2006

Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys

scientific article

Controlled sampling of ribosomally active protistan diversity in sediment-surface layers identifies putative players in the marine carbon sink

scientific article published on 09 January 2020

Diversity, ecology and biogeochemistry of cyst-forming acantharia (radiolaria) in the oceans

scientific article published in 2013

Global Trends in Marine Plankton Diversity across Kingdoms of Life

scientific article published on 01 November 2019

Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding

scientific article published on 3 September 2015

High and specific diversity of protists in the deep-sea basins dominated by diplonemids, kinetoplastids, ciliates and foraminiferans

scientific article published on 23 April 2021

Isolation, phylogeny and evolution of the SymRK gene in the legume genus Lupinus L.

scientific article

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

scientific article published on 28 June 2015

Meiosis gene inventory of four ciliates reveals the prevalence of a synaptonemal complex-independent crossover pathway

scientific article

Molecular diversity and distribution of marine fungi across 130 European environmental samples

scientific article published in November 2015

Molecular phylogeny and morphological evolution of the Acantharia (Radiolaria).

scientific article

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

scientific article published on May 2015

PFR²: a curated database of planktonic foraminifera 18S ribosomal DNA as a resource for studies of plankton ecology, biogeography and evolution.

scientific article published on 31 March 2015

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

article

Patterns of rare and abundant marine microbial eukaryotes

scientific article

Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context

scientific article published on 27 January 2014

Swarm v2: highly-scalable and high-resolution amplicon clustering

scientific article

Swarm: robust and fast clustering method for amplicon-based studies

scientific article published on 25 September 2014

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy

scientific article

Transcriptome divergence between the hexaploid salt-marsh sister species Spartina maritima and Spartina alterniflora (Poaceae).

scientific article

UniEuk: Time to Speak a Common Language in Protistology!

scientific article

VSEARCH: a versatile open source tool for metagenomics

scientific article

Vampires in the oceans: predatory cercozoan amoebae in marine habitats

scientific article

Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean

scientific article published on 08 November 2018

Yeasts dominate soil fungal communities in three lowland Neotropical rainforests

scientific article

pr2‐primers: An 18S rRNA primer database for protists

scientific article published in 2021

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