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List of works by Marco Galardini

Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes

article

COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses

scientific article published on 19 November 2015

CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes

scientific article

Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis

scientific article

Draft Genome Sequence of Chromate-Resistant and Biofilm-Producing Strain Pseudomonas alcaliphila 34.

scientific article

Draft Genome Sequence of a Highly Virulent Strain of the Plant Pathogen Dickeya solani, IFB0099.

scientific article published on 19 March 2015

DuctApe: a suite for the analysis and correlation of genomic and OmniLog™ Phenotype Microarray data

scientific article

Enly: Improving Draft Genomes through Reads Recycling.

scientific article published on 5 April 2014

Evaluation of the Performances of Ribosomal Database Project (RDP) Classifier for Taxonomic Assignment of 16S rRNA Metabarcoding Sequences Generated from Illumina-Solexa NGS.

scientific article published on February 2015

Evolution of Intra-specific Regulatory Networks in a Multipartite Bacterial Genome

scientific article published on 4 September 2015

Exploring the dynamics of bacterial community composition in soil: the pan-bacteriome approach

scientific article published on 7 January 2015

Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti ⬇️

scientific article

From pangenome to panphenome and back

scientific article published in January 2015

High-throughput phenomics

scientific article published on 01 January 2015

Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions

scientific article published on 07 July 2020

Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study

scientific article published on 28 October 2020

Mapping contigs using CONTIGuator

scientific article

MeDuSa: a multi-draft based scaffolder.

scientific article published on 25 March 2015

Metabolic modelling reveals the specialization of secondary replicons for niche adaptation in Sinorhizobium meliloti.

scientific article published on 22 July 2016

Mixed Nodule Infection in Sinorhizobium meliloti-Medicago sativa Symbiosis Suggest the Presence of Cheating Behavior

scientific article published on 13 June 2016

Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies

scientific article published on 19 March 2018

Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58

scientific article

Phenotype inference in an Escherichia coli strain panel.

scientific article published on 27 December 2017

Phenotype prediction in an Escherichia coli strain panel

scholarly article published 24 May 2017

Plant-bacteria association and symbiosis: are there common genomic traits in alphaproteobacteria?

scientific article published on 29 November 2011

Preface. Bacterial pangenomics

scientific article published in January 2015

Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti

scientific article published in January 2013

The DivJ, CbrA and PleC system controls DivK phosphorylation and symbiosis in Sinorhizobium meliloti

scientific article published on 19 August 2013

The impact of the genetic background on gene deletion phenotypes in Saccharomyces cerevisiae

scientific article published on 01 December 2019

The success of acinetobacter species; genetic, metabolic and virulence attributes

scientific article

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