Search filters

List of works by Dmitry Pyshny

5'-bis-pyrenylated oligonucleotides displaying excimer fluorescence provide sensitive probes of RNA sequence and structure.

scientific article published on September 2001

A QCM-based rupture event scanning technique as a simple and reliable approach to study the kinetics of DNA duplex dissociation

scientific article published on 27 July 2020

A Versatile Approach to Attachment of Triarylmethyl Labels to DNA for Nanoscale Structural EPR Studies at Physiological Temperatures.

scientific article

A convenient solid phase approach to obtain lipophilic 5'-phosphoramidate derivatives of DNA and RNA oligonucleotides.

scientific article published on 9 February 2018

A new approach to precise thermodynamic characterization of hybridization properties of modified oligonucleotides: Comparative studies of deoxyribo- and glycine morpholine pentaadenines.

scientific article published on 6 January 2018

A simple approach to prepare molecularly imprinted polymers from nylon-6.

scientific article published in August 2013

Allele-Specific PCR for KRAS Mutation Detection Using Phosphoryl Guanidine Modified Primers

scientific article published on 26 October 2020

Apoptosis-mediated endothelial toxicity but not direct calcification or functional changes in anti-calcification proteins defines pathogenic effects of calcium phosphate bions.

scientific article published on 02 June 2016

Aptamers against pathogenic microorganisms

scientific article published on 10 August 2015

CD and melting curves structural studies of the tandem DNA complex formed with oligonucleotides carrying photoactive and sensitizing groups in the nick region.

scientific article published in December 2001

Cell Surface Oligonucleotide-Binding Proteins of Human Squamous Carcinoma A431 Cells ⬇️

scientific article published on May 1, 2003

Changes in the Ultrastructure of <i>Staphylococcus aureus</i> Treated with Cationic Peptides and Chlorhexidine

scientific article published on 14 December 2020

Comparison of behaviour in different liquids and in cells of gold nanorods and spherical nanoparticles modified by linear polyethyleneimine and bovine serum albumin

scientific article published on July 2014

Complementary-addressed site-directed spin labeling of long natural RNAs

scientific article published on 6 June 2016

Covalently attached oligodeoxyribonucleotides induce RNase activity of a short peptide and modulate its base specificity.

scientific article

DNA Binding to Gold Nanoparticles through the Prism of Molecular Selection: Sequence-Affinity Relation

scientific article published on 03 June 2019

Design of a New Fluorescent Oligonucleotide-Based Assay for a Highly Specific Real-Time Detection of Apurinic/Apyrimidinic Site Cleavage by Tyrosyl-DNA Phosphodiesterase 1.

scientific article published on 3 September 2015

Efficiency of Coaxial Stacking Depends on the DNA Duplex Structure ⬇️

scientific article published on December 1, 2003

Efficiency of exonucleolytic action of apurinic/apyrimidinic endonuclease 1 towards matched and mismatched dNMP at the 3' terminus of different oligomeric DNA structures correlates with thermal stability of DNA duplexes

scientific article published on 27 January 2006

Efficient functionalization of oligonucleotides by new achiral nonnucleosidic monomers.

scientific article published on 12 May 2014

Evaluation of the Gibbs Free Energy Changes and Melting Temperatures of DNA/DNA Duplexes Using Hybridization Enthalpy Calculated by Molecular Dynamics Simulation

scientific article published on 25 November 2015

Fast and Strong Adsorption of Native Oligonucleotides on Citrate-Coated Gold Nanoparticles

scientific article

Flow-Seq Evaluation of Translation Driven by a Set of Natural Escherichia coli 5′-UTR of Variable Length

scientific article published in 2022

HIV‐1 Reverse transcriptase is capable of elongating derivatives of sequence specific noncomplementary oligodeoxynucleotides ⬇️

scientific article published on August 1, 1998

Hybridization of the bridged oligonucleotides with DNA: thermodynamic and kinetic studies

scientific article published on 01 April 2006

Immunochemical assay for deoxyribonuclease activity in body fluids.

scientific article

Interaction of oligonucleotides conjugated to substituted chromones and coumarins with HIV-1 reverse transcriptase

scientific article published on 01 October 1999

Interaction of poly(ADP-ribose) polymerase 1 with apurinic/apyrimidinic sites within clustered DNA damage ⬇️

scientific article published on January 1, 2011

Interaction of triarylmethyl radicals with DNA termini revealed by orientation-selective W-band double electron-electron resonance spectroscopy.

scientific article published on 17 October 2016

Long-term stability and scale-up of noncovalently bound gold nanoparticle-siRNA suspensions

scientific article published on 23 December 2019

Molecular Dynamics Simulation of Polarizable Gold Nanoparticles Interacting with Sodium Citrate

scientific article published on 11 January 2019

Nanorings from Concatemeric DNA: Chemical Modification Drives Nanostructure Formation

scientific article published on June 2015

New oligonucleotide derivatives as unreactive substrate analogues and potential inhibitors of human apurinic/apyrimidinic endonuclease APE1.

scientific article

Non-Covalent Associates of siRNAs and AuNPs Enveloped with Lipid Layer and Doped with Amphiphilic Peptide for Efficient siRNA Delivery.

scientific article published on 19 July 2018

Non-covalent binding of nucleic acids with gold nanoparticles provides their stability and effective desorption in environment mimicking biological media

scientific article published on 31 May 2018

Nuclease resistance and RNase H sensitivity of oligonucleotides bridged by oligomethylenediol and oligoethylene glycol linkers.

scientific article

Oligonucleotide functionalization by a novel alkyne-modified nonnucleosidic reagent obtained by versatile building block chemistry.

scientific article

Oligonucleotide-minor groove binder conjugates and their complexes with complementary DNA: effect of conjugate structural factors on the thermal stability of duplexes.

scholarly article

Oligoribonucleotides with Functionalized Nucleobases as New Modifiers of Biopolymers

scientific article published on 01 May 2003

PAcM-AN: poly (N-acryloylmorpholine)-conjugated antisense oligonucleotides

scientific article published on 01 August 2000

Peptide-oligonucleotide conjugates exhibiting pyrimidine-X cleavage specificity efficiently silence miRNA target acting synergistically with RNase H

scientific article published in Scientific Reports

Phage display antibodies against ectromelia virus that neutralize variola virus: Selection and implementation for p35 neutralizing epitope mapping

scientific article published on 7 February 2018

Physiological-Temperature Distance Measurement in Nucleic Acid using Triarylmethyl-Based Spin Labels and Pulsed Dipolar EPR Spectroscopy

scientific article published on 01 July 2014

Pre-steady state kinetics of DNA binding and abasic site hydrolysis by tyrosyl-DNA phosphodiesterase 1.

scientific article

QCM-based measurement of bond rupture forces in DNA double helices for complementarity sensing

scientific article published on 26 March 2014

QCM-based rupture force measurement as a tool to study DNA dehybridization and duplex stability

scientific article published on 12 November 2016

RNase T1 mimicking artificial ribonuclease.

scientific article published on 27 March 2007

Ribonuclease activity of the peptides with alternating arginine and leucine residues conjugated to tetrathymidilate.

scientific article published in October 2004

Room-temperature electron spin relaxation of nitroxides immobilized in trehalose: Effect of substituents adjacent to NO-group

scientific article published on 4 March 2016

SDS-PAGE procedure: Application for characterization of new entirely uncharged nucleic acids analogs

scientific article published on 7 November 2017

Saccharides as Prospective Immobilizers of Nucleic Acids for Room-Temperature Structural EPR Studies

scientific article published on 19 June 2016

Short oligonucleotide tandem ligation assay for genotyping of single-nucleotide polymorphisms in Y chromosome.

scientific article

Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)

scientific article

Structure and Hybridization Properties of Glycine Morpholine Oligomers in Complexes with DNA and RNA: Experimental and Molecular Dynamics Studies

scientific article published on 02 December 2019

Study of a DNA Duplex by Nuclear Magnetic Resonance and Molecular Dynamics Simulations. Validation of Pulsed Dipolar Electron Paramagnetic Resonance Distance Measurements Using Triarylmethyl-Based Spin Labels

scientific article

Surface modification of SOI-FET sensors for label-free and specific detection of short RNA analyte.

scientific article published on 27 July 2016

Synthesis and hybridization properties of the conjugates of oligonucleotides and stabilization agents--II

scientific article published on 01 October 1997

Synthesis and hybridization properties of the conjugates of oligonucleotides and stabilization agents. Part 3.

scientific article published in March 2005

The NMR Structure of Estrone (Es)-tethered Tandem DNA Duplex: [d(5′pCAGCp3′)-Es] + [Es-d(5′pTCCA3′)]: d(5′pTGGAGCTG3′) ⬇️

scientific article published on December 1, 1997

The influence of nearest neighbours on the efficiency of coaxial stacking at contiguous stacking hybridization of oligodeoxyribonucleotides

scientific article published on 01 October 2004

The influence of the non-nucleotide insert on the hybridization properties of oligonucleotides

scientific article published on 01 October 2004

Thermodynamic Analysis of Stacking Hybridization of Oligonucleotides with DNA Template ⬇️

scientific article published on December 1, 2001

Thermodynamic and spectral properties of DNA miniduplexes with the terminal G x A mispairs and 3' or 5' dangling bases

scientific article published on 01 December 1997

Thermodynamics of interaction of phthalocyanine-oligonucleotide conjugates with single- and double-stranded DNA.

scientific article published in October 2004

Triarylmethyl Labels: Toward Improving the Accuracy of EPR Nanoscale Distance Measurements in DNAs

scientific article published on 26 May 2015

[Interaction of short nucleotide derivatives with nucleic acids. IV. Modification of DNA by an alkylating tetranucleotide reagents in the presence of effectors in perfect and imperfect complexes]

scientific article published on 01 November 1997

[Nucleic acids interactions with short oligonucleotide derivatives. II. Tandem of short oligonucleotides as highly sensitive system for identification of single base substitutions in target DNA]

scientific article published on 01 July 1997

Paulina is supported by:

About Paulina

Help