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List of works by Jussi Tohka

A versatile software package for inter-subject correlation based analyses of fMRI.

scientific article published on 31 January 2014

Acute Hippocampal Damage as a Prognostic Biomarker for Cognitive Decline but Not for Epileptogenesis after Experimental Traumatic Brain Injury

scientific article published on 27 October 2022

Adaptive edge detection based on 3D kernel functions for biomedical image analysis

An automatic framework for quantitative validation of voxel based morphometry measures of anatomical brain asymmetry

scientific article published on 18 June 2014

Automated diagnosis of brain tumours astrocytomas using probabilistic neural network clustering and support vector machines

scientific article published in February 2005

Automatic Quantification of Fluorescence from Clustered Targets in Microscope Images

Automatic cerebral and cerebellar hemisphere segmentation in 3D MRI: adaptive disconnection algorithm.

scientific article published on 10 February 2010

Automatic compartmental decomposition for 3D MR images of human brain.

scientific article published in January 2008

Automatic extraction of brain surface and mid-sagittal plane from PET images applying deformable models.

scientific article published in July 2005

Automatic independent component labeling for artifact removal in fMRI.

scientific article published on 25 October 2007

Automatic statistical shape analysis of cerebral asymmetry in 3D T1-weighted magnetic resonance images at vertex-level: application to neuroleptic-naïve schizophrenia

scientific article published on 20 January 2013

Bayesian error estimation and model selection in sparse logistic regression

Brain MRI tissue classification based on local Markov random fields

scientific article

Brain hemodynamic activity during viewing and re-viewing of comedy movies explained by experienced humor

scientific article

Clustering inter-subject correlation matrices in functional magnetic resonance imaging

scholarly article published November 2010

Comparing fMRI inter-subject correlations between groups

scholarly article published 16 July 2018

Comparison of Feature Selection Techniques in Machine Learning for Anatomical Brain MRI in Dementia

scientific article

Comparison of feature representations in MRI-based MCI-to-AD conversion prediction

scientific article published on 9 March 2018

Comparison of manual and automatic techniques for substriatal segmentation in 11C-raclopride high-resolution PET studies

scientific article published on 9 June 2016

Deconvolution-based partial volume correction in Raclopride-PET and Monte Carlo comparison to MR-based method.

scientific article published on 7 November 2007

DeepACSON automated segmentation of white matter in 3D electron microscopy

scientific article published on 10 February 2021

Delineation of brain structures from positron emission tomography images with deformable models.

scientific article published in January 2003

Difference of Gaussians revolved along elliptical paths for ultrasound fetal head segmentation

scientific article published on 30 September 2014

Differences in fMRI intersubject correlation while viewing unedited and edited videos of dance performance

scientific article published on 16 July 2015

Effects of spatial smoothing on inter-subject correlation based analysis of FMRI.

scientific article

Elevated Acute Plasma miR-124-3p Level Relates to Evolution of Larger Cortical Lesion Area after Traumatic Brain Injury

scientific article published on 04 March 2020

Evaluation and comparison of current fetal ultrasound image segmentation methods for biometric measurements: a grand challenge

scientific article published on 6 August 2013

Evaluation of the automatic three-dimensional delineation of caudate and putamen for PET receptor occupancy studies.

scientific article published in January 2008

FAST-PVE: Extremely Fast Markov Random Field Based Brain MRI Tissue Classification

Face Prediction from fMRI Data during Movie Stimulus: Strategies for Feature Selection

Fast and robust parameter estimation for statistical partial volume models in brain MRI.

scientific article published on September 2004

Functional brain segmentation using inter-subject correlation in fMRI.

scientific article

Genetic algorithms for finite mixture model based voxel classification in neuroimaging

scientific article

Harmonization of the pipeline for seizure detection to phenotype post-traumatic epilepsy in a preclinical multicenter study on post-traumatic epileptogenesis

scientific article published on 27 April 2019

Hippocampal position and orientation as prognostic biomarkers for posttraumatic epileptogenesis: An experimental study in a rat lateral fluid percussion model

scientific article published on 12 May 2022

How Many Is Enough? Effect of Sample Size in Inter-Subject Correlation Analysis of fMRI.

scientific article published on 13 January 2016

Imaging brain change across different time scales

scientific article

Improved estimates of partial volume coefficients from noisy brain MRI using spatial context

scientific article

In Vitro and In Vivo Pipeline for Validation of Disease-Modifying Effects of Systems Biology-Derived Network Treatments for Traumatic Brain Injury-Lessons Learned ⬇️

scientific article published on 29 October 2019

Individualized prediction of future cognition based on developmental changes in cortical anatomy

scientific article published in December 2022

Inter-subject correlation in fMRI: method validation against stimulus-model based analysis.

scientific article

Inter-subject correlation of brain hemodynamic responses during watching a movie: localization in space and frequency

scientific article

Long-term antipsychotic and benzodiazepine use and brain volume changes in schizophrenia: The Northern Finland Birth Cohort 1966 study

scientific article published on 20 May 2017

M89. Long-Term Antipsychotic and Benzodiazepine Use and Brain Volume Changes in Schizophrenia: The Northern Finland Birth Cohort 1966 Study.

scientific article

Machine learning framework for early MRI-based Alzheimer's conversion prediction in MCI subjects.

scientific article published on 12 October 2014

Mind reading with regularized multinomial logistic regression

Model selection for linear classifiers using Bayesian error estimation

scholarly article by Heikki Huttunen & Jussi Tohka published November 2015 in Pattern Recognition

NABS: non-local automatic brain hemisphere segmentation

scientific article published on 7 February 2015

Object-oriented implementation for the dual surface minimisation algorithm.

scientific article published in January 2005

Partial volume effect modeling for segmentation and tissue classification of brain magnetic resonance images: A review

scientific article

Predicting symptom severity in autism spectrum disorder based on cortical thickness measures in agglomerative data

scientific article

Prediction of brain maturity based on cortical thickness at different spatial resolutions

scientific article

Rey's Auditory Verbal Learning Test scores can be predicted from whole brain MRI in Alzheimer's disease

scientific article published on 18 December 2016

Robust MRI brain tissue parameter estimation by multistage outlier rejection.

scientific article

Robust estimation of bioaffinity assay fluorescence signals.

scientific article published in October 2006

STATISTICAL MODELING OF ATTENUATION-CORRECTED PET DATA WITH APPLICATION TO RECONSTRUCTION OF REGIONAL TIME ACTIVITY CURVES

Searching for Predictors of Migraine Chronification: a Pilot Study of 1911A>G Polymorphism of TRPV1 Gene in Episodic Versus Chronic Migraine

scientific article published on 22 August 2020

Segmentation of striatal brain structures from high resolution PET images.

scientific article published on 4 November 2009

Semi-supervised learning in MCI-to-ad conversion prediction — When is unlabeled data useful?

scientific article published in June 2014

Sex-specific transcriptional and proteomic signatures in schizophrenia

scientific article published on 02 September 2019

Shape Analysis of Human Brain Interhemispheric Fissure Bending in MRI

Sign-Consistency Based Variable Importance For Machine Learning In Brain Imaging:

scholarly article published 5 April 2017

Sign-Consistency Based Variable Importance for Machine Learning in Brain Imaging

scientific article published on 01 October 2019

Simplified Reeb Graph as Effective Shape Descriptor for the Striatum

Simulation and Validation in Brain Image Analysis.

scientific article published on 28 June 2016

Spectators’ aesthetic experience of sound and movement in dance performance: A transdisciplinary investigation

Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: the CADDementia challenge

scientific article published on 31 January 2015

Structural Brain Imaging Phenotypes of Mild Cognitive Impairment (MCI) and Alzheimer's Disease (AD) Found by Hierarchical Clustering

scientific article published on 13 November 2020

T1 white/gray contrast as a predictor of chronological age, and an index of cognitive performance

scientific article published in March 2018

The impact of sampling density upon cortical network analysis: regions or points

scientific article

Unsupervised segmentation of cardiac PET transmission images for automatic heart volume extraction.

scientific article published in January 2006

Voxel importance in classifier ensembles based on sign consistency patterns: application to sMRI

gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy

scientific article published on 06 April 2022

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