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List of works by Stefan Taudien

8p23 beta-defensin copy number determination by single-locus pseudogene-based paralog ratio tests risk bias due to low-frequency sequence variations

scientific article published on 24 January 2014

A Homolog of Blade-On-Petiole 1 and 2 (BOP1/2) Controls Internode Length and Homeotic Changes of the Barley Inflorescence

scientific article published on 14 April 2016

A chromosome conformation capture ordered sequence of the barley genome

scientific article

A highly conserved retinoic acid responsive element controls wt1a expression in the zebrafish pronephros

scientific article published in September 2009

A major invasion of transposable elements accounts for the large size of the Blumeria graminis f.sp. tritici genome

scientific article

A physical, genetic and functional sequence assembly of the barley genome ⬇️

scientific article published on October 17, 2012

A poke into the diversity and associations within human anterior nare microbial communities

scientific article

A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms

scientific article published on 15 November 2013

A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley

scientific article published on 12 May 2009

Association studies of the copy-number variable ß-defensin cluster on 8p23.1 in adenocarcinoma and chronic pancreatitis

scientific article

BSTA: a targeted approach combines bulked segregant analysis with next- generation sequencing and de novo transcriptome assembly for SNP discovery in sunflower.

scientific article

CYP3 phylogenomics: evidence for positive selection of CYP3A4 and CYP3A7

scientific article published on 01 January 2008

Comparative analysis of mitochondrial genomes from closely related Rhynchosporium species reveals extensive intron invasion

scientific article

Comparative evaluation of establishing a human gut microbial community within rodent models

scientific article

Comparative genomics to explore phylogenetic relationship, cryptic sexual potential and host specificity of Rhynchosporium species on grasses

scientific article (publication date: 22 November 2016)

Comprehensive assessment of sequence variation within the copy number variable defensin cluster on 8p23 by target enriched in-depth 454 sequencing

scientific article

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L

scientific article

DNA sequence and analysis of human chromosome 8

scientific article

De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley

scientific article

Different structural organization of the encephalopsin gene in man and mouse

scientific article (publication date: 24 July 2002)

Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome

scientific article published on 12 June 2013

Effect of the lipoxygenase inhibitor baicalein on bone tissue and bone healing in ovariectomized rats

scientific article published on 11 January 2019

Exclusion of mutations in the MTMR1 gene as a frequent cause of X-linked myotubular myopathy

scientific article published in January 2002

Exploiting the mosaic structure of trans-acyltransferase polyketide synthases for natural product discovery and pathway dissection

scientific article published on 27 January 2008

Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives

scientific article published on 27 May 2011

From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.).

scientific article

Gene content and virtual gene order of barley chromosome 1H.

scientific article published on 19 August 2009

Genetic Factors of the Disease Course After Sepsis: Rare Deleterious Variants Are Predictive

scientific article published on 14 September 2016

Genetic Factors of the Disease Course after Sepsis: A Genome-Wide Study for 28Day Mortality

scientific article published on 14 September 2016

Genetic variants of the copy number polymorphic beta-defensin locus are associated with sporadic prostate cancer

scientific article

Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae

scientific article

Genomics-based high-resolution mapping of the BaMMV/BaYMV resistance gene rym11 in barley (Hordeum vulgare L.).

scientific article published on 2 March 2013

Haplotyping and copy number estimation of the highly polymorphic human beta-defensin locus on 8p23 by 454 amplicon sequencing

scientific article

High tandem repeat content in the genome of the short-lived annual fish Nothobranchius furzeri: a new vertebrate model for aging research

scientific article published on 11 February 2009

High-resolution mapping of the 8p23.1 beta-defensin cluster reveals strictly concordant copy number variation of all genes.

scientific article published in October 2008

Highly parallel gene-to-BAC addressing using microarrays

scientific article published in March 2011

Impaired Planar Germ Cell Division in the Testis, Caused by Dissociation of RHAMM from the Spindle, Results in Hypofertility and Seminoma

scientific article published on 19 August 2016

Initial sequencing and analysis of the human genome

scientific article published on 15 February 2001

Insights into Sex Chromosome Evolution and Aging from the Genome of a Short-Lived Fish

scientific article

Linking chemical and microbial diversity in marine sponges: possible role for poribacteria as producers of methyl-branched fatty acids

scientific article published in December 2010

Method for preparing single-stranded DNA templates for Pyrosequencing using vector ligation and universal biotinylated primers.

scientific article

Molecular, phylogenetic and comparative genomic analysis of the cytokinin oxidase/dehydrogenase gene family in the Poaceae

scientific article published on 15 August 2011

Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes.

scientific article

Narrowing down the distal border of the copy number variable beta-defensin gene cluster on human 8p23.

scientific article

Polyketide assembly lines of uncultivated sponge symbionts from structure-based gene targeting

scientific article

Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence

scientific article

SNP and haplotype mapping for genetic analysis in the rat.

scientific article

Sequence composition and gene content of the short arm of rye (Secale cereale) chromosome 1.

scientific article

Sequencing of 21 varicella-zoster virus genomes reveals two novel genotypes and evidence of recombination

scientific article (publication date: February 2012)

Sequencing of BAC pools by different next generation sequencing platforms and strategies

scientific article

Should the draft chimpanzee sequence be finished?

scientific article

The DNA sequence of the human X chromosome

scientific article published on 17 March 2005

The ITS1-5.8S-ITS2 sequence region in the Musaceae: structure, diversity and use in molecular phylogeny

scientific article published in 2011

The distribution of α-kleisin during meiosis in the holocentromeric plant Luzula elegans.

scientific article published on 13 June 2016

The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization.

scientific article published on 12 December 2012

The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels ⬇️

scientific article published on March 16, 2013

The unique complexity of the CYP3A4 upstream region suggests a nongenetic explanation of its expression variability

scientific article

Unlocking the barley genome by chromosomal and comparative genomics

scientific article published on 5 April 2011

Validation of mRNA/EST-based gene predictions in human Xp11.4 revealed differences to the organization of the orthologous mouse locus

scientific article published on 8 December 2005

Violating the splicing rules: TG dinucleotides function as alternative 3' splice sites in U2-dependent introns

scientific article

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