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List of works by Joanna Sułkowska

Complex lasso: new entangled motifs in proteins.

scientific article

DCA-MOL: A PyMOL Plugin To Analyze Direct Evolutionary Couplings

scientific article published on 28 January 2019

Defining and detecting links in chromosomes

scientific article published on 13 August 2019

GapRepairer: a server to model a structural gap and validate it using topological analysis

scientific article published on 01 October 2018

Genus trace reveals the topological complexity and domain structure of biomolecules

scientific article published in Scientific Reports

In Search of Functional Advantages of Knots in Proteins.

scientific article

Knot localization in proteins.

scientific article published on April 2013

Knot or not? <scp>Identifying</scp> unknotted proteins in knotted families with sequence‐based <scp>Machine Learning</scp> model

scientific article published in 2024

KnotGenome: a server to analyze entanglements of chromosomes.

scientific article published in July 2018

KnotProt 2.0: a database of proteins with knots and other entangled structures

scientific article published on 01 January 2019

KnotProt: a database of proteins with knots and slipknots

scientific article

Knot_pull-python package for biopolymer smoothing and knot detection

scientific article published on 01 February 2020

Knotting and unknotting proteins in the chaperonin cage: Effects of the excluded volume

scientific article

Knotting pathways in proteins.

scientific article published on April 2013

LinkProt: a database collecting information about biological links

scientific article

Methyl transfer by substrate signaling from a knotted protein fold

scientific article

PconsFam: An Interactive Database of Structure Predictions of Pfam Families

scientific article published on 21 February 2019

Perception of patriotic entrepreneurship in Poland and Ukraine

scientific article published in January 2022

Prediction of the optimal set of contacts to fold the smallest knotted protein.

scientific article published on 20 August 2015

Protein Knotting by Active Threading of Nascent Polypeptide Chain Exiting from the Ribosome Exit Channel

scientific article published on 12 October 2018

Proteins' Knotty Problems

scientific article published on 01 November 2018

PyLasso: a PyMOL plugin to identify lassos

scientific article

PyLink: a PyMOL plugin to identify links

scientific article published on 01 September 2019

Slipknotted and unknotted monovalent cation-proton antiporters evolved from a common ancestor

scientific article published on 14 October 2021

Statistical Properties of Lasso-Shape Polymers and Their Implications for Complex Lasso Proteins Function

scientific article published on 17 April 2019

Supercoiling in a Protein Increases its Stability

scientific article published on 01 September 2019

The exclusive effects of chaperonin on the behavior of proteins with 52 knot.

scientific article published on 16 March 2018

To Tie or Not to Tie? That Is the Question

scientific article published on 16 September 2017

Topological knots and links in proteins.

scientific article

TrmD: A Methyl Transferase for tRNA Methylation With m1G37.

scientific article published on 12 April 2017