List of works - Teresa Carlomagno

13C-Detection in RNA Bases: Revealing Structure−Chemical Shift Relationships

scientific article published on 04 December 2007

1H, 13C and 15N resonance assignments of the Calmodulin-Munc13-1 peptide complex

scientific article published on 15 December 2009

1H, 13C, 15N chemical shift assignments of SHP2 SH2 domains in complex with PD-1 immune-tyrosine motifs

scientific article published on 01 April 2020

1H, 13C, and 15N backbone chemical-shift assignments of SARS-CoV-2 non-structural protein 1 (leader protein)

scientific article published in 2021

A Distinct, Sequence-Induced Conformation Is Required for Recognition of the Constitutive Decay Element RNA by Roquin

scientific article

A Thorough Dynamic Interpretation of Residual Dipolar Couplings in Ubiquitin

scientific article published on 01 February 2006

A bromodomain-DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT.

scientific article

A new method for the simultaneous measurement of magnitude and sign of 1DCH and 1DHH dipolar couplings in methylene groups

scientific article published on 01 June 2000

A novel PH-cT-COSY methodology for measuring JPH coupling constants in unlabeled nucleic acids. application to HIV-2 TAR RNA.

scientific article published in January 2002

A reducing milieu renders cofilin insensitive to phosphatidylinositol 4,5-bisphosphate (PIP2) inhibition.

scientific article published on 03 September 2013

A role for central carbon metabolism in mammalian embryonic development?

scientific article published on 28 May 2014

A suite of solid-state NMR experiments for RNA intranucleotide resonance assignment in a 21 kDa protein-RNA complex

scientific article published on 26 July 2013

Accounting for conformational variability in protein-ligand docking with NMR-guided rescoring

scientific article

An NMR-based scoring function improves the accuracy of binding pose predictions by docking by two orders of magnitude

scientific article published on 14 December 2011

An efficient strategy for the determination of the three-dimensional architecture of ribonucleoprotein complexes by the combination of a few easily accessible NMR and biochemical data: intermolecular recognition in a U4 spliceosomal complex

scientific article

An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum

scientific article published on 14 November 2014

Archaea box C/D enzymes methylate two distinct substrate rRNA sequences with different efficiency

scientific article

Argyrin a reveals a critical role for the tumor suppressor protein p27(kip1) in mediating antitumor activities in response to proteasome inhibition

scientific article

Assignment and NOE analysis of 2'-hydroxyl protons in RNA: implications for stabilization of RNA A-form duplexes

scientific article

Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP

scientific article

Bio-Nuclear Magnetic Resonance

Calculation of the Dependence of Homo- and Heteronuclear3J and2J Scalar Couplings for the Determination of the 2′-Hydroxy Conformation in RNA

scientific article published on 01 October 2006

Chemical Analysis of a "Miller-Type" Complex Prebiotic Broth : Part II: Gas, Oil, Water and the Oil/Water-Interface

scientific article

Chemical Analysis of a "Miller-Type" Complex Prebiotic Broth: Part I: Chemical Diversity, Oxygen and Nitrogen Based Polymers

scientific article

Computational techniques are valuable tools for the discovery of protein-protein interaction inhibitors: the 14-3-3σ case

scientific article

Conformational analysis of dolastatin 10: an NMR and theoretical approach

scientific article published on October 1995

Conformational preferences of natural and C3-modified epothilones in aqueous solution

scientific article

Cross-correlated relaxation for measurement of angles between tensorial interactions.

scientific article

Crystallography-independent determination of ligand binding modes

scientific article

Derivation of Dihedral Angles from CH–CH Dipolar–Dipolar Cross-Correlated Relaxation Rates: A C–C Torsion Involving a Quaternary Carbon Atom in Epothilone A Bound to Tubulin

scientific article published on 01 June 2003

Determination of aliphatic side-chain conformation using cross-correlated relaxation: application to an extraordinarily stable 2'-aminoethoxy-modified oligonucleotide triplex

scientific article published in August 2001

Drug design for G-protein-coupled receptors by a ligand-based NMR method

scientific article

Elucidation of the Structure and Intermolecular Interactions of a Reversible Cyclic-Peptide Inhibitor of the Proteasome by NMR Spectroscopy and Molecular Modeling

scientific article published on 01 May 2010

Errors in the measurement of cross-correlated relaxation rates and how to avoid them

scientific article

Field dependent dynamic nuclear polarization with radicals in aqueous solution

scientific article

Guiding protein-ligand docking with different experimental NMR-data.

scientific article

High-Resolution Solid-State NMR Structure of an Anticancer Agent

scientific article published on 01 April 2007

Histone chaperone exploits intrinsic disorder to switch acetylation specificity

scientific article published on 06 August 2019

Hyperpolarized Binding Pocket Nuclear Overhauser Effect for Determination of Competitive Ligand Binding

Identification of a novel pharmacophore for peptide toxins interacting with K+ channels

scientific article published on 30 March 2005

Influence of the 2'-hydroxyl group conformation on the stability of A-form helices in RNA.

scientific article

Interaction of Epothilone B (Patupilone) with Microtubules as Detected by Two-Dimensional Solid-State NMR Spectroscopy

scholarly article by Ashutosh Kumar et al published 31 August 2010 in Angewandte Chemie International Edition

Intermolecular protein-RNA interactions revealed by 2D 31P-15N magic angle spinning solid-state NMR spectroscopy

article

Isotope labeling for studying RNA by solid-state NMR spectroscopy

scientific article published on 12 April 2018

KappaM-conotoxin RIIIK, structural and functional novelty in a K+ channel antagonist

scientific article published in July 2004

Ligand-target interactions: what can we learn from NMR?

scientific article

M3: an integrative framework for structure determination of molecular machines.

scientific article published on 14 August 2017

Measuring the chi 1 torsion angle in protein by CH-CH cross-correlated relaxation: a new resolution-optimised experiment

scientific article published in October 2003

Modular architecture of Munc13/calmodulin complexes: dual regulation by Ca2+ and possible function in short-term synaptic plasticity

scientific article

Molecular Recognition of Epothilones by Microtubules and Tubulin Dimers Revealed by Biochemical and NMR Approaches

scientific article published on 25 February 2014

Molecular mechanism of SHP2 activation by PD-1 stimulation

scientific article published on 31 January 2020

NMR assignments of HIV-2 TAR RNA

article

NMR in natural products: understanding conformation, configuration and receptor interactions ⬇️

scientific article published on March 29, 2012

New Methylene Specific Experiments for the Measurement of Scalar Spin–Spin Coupling Constants between Protons Attached to13C

scientific article published on 01 November 1998

On-the-Fly Integration of Data from a Spin-Diffusion-Based NMR Experiment into Protein-Ligand Docking

scientific article

Optimization of protein samples for NMR using thermal shift assays.

scientific article published on 17 March 2016

PLUSH TACSY: Homonuclear planar TACSY with two-band selective shaped pulses applied to C?,C? transfer and C?,Caromatic correlations

scientific article published on 01 September 1996

Peptide ligands selected with CD4-induced epitopes on native dualtropic HIV-1 envelope proteins mimic extracellular coreceptor domains and bind to HIV-1 gp120 independently of coreceptor usage

scientific article

Phf19 links methylated Lys36 of histone H3 to regulation of Polycomb activity

scientific article

Phosphotyrosine couples peptide binding and SHP2 activation via a dynamic allosteric network

scientific article published on 20 April 2021

Present and future of NMR for RNA-protein complexes: a perspective of integrated structural biology

scientific article published on April 2014

Probing mutation-induced structural perturbations by refinement against residual dipolar couplings: application to the U4 spliceosomal RNP complex

scientific article published in April 2009

Protein-RNA interfaces probed by 1H-detected MAS solid-state NMR spectroscopy

scientific article published on 18 January 2013

RNA structure determination by solid-state NMR spectroscopy

scientific article

Rapid access to RNA resonances by proton-detected solid-state NMR at >100 kHz MAS

scholarly article by Alexander Marchanka et al published 21 August 2018 in Chemical Communications

Recognition of 2'-O-methylated 3'-end of piRNA by the PAZ domain of a Piwi protein

scientific article

Recruitment of phospholipase Cγ1 to the non-structural membrane protein pK15 of Kaposi Sarcoma-associated herpesvirus promotes its Src-dependent phosphorylation

scientific article published on 18 June 2021

Residual dipolar coupling TOCSY for direct through space correlations of base protons and phosphorus nuclei in RNA.

scientific article published in April 2001

Resonance assignment and secondary structure determination and stability of the recombinant human uteroglobin with heteronuclear multidimensional NMR.

scientific article published in January 1997

RflM mediates target specificity of the RcsCDB phosphorelay system for transcriptional repression of flagellar synthesis in Salmonella enterica

scientific article published on 20 May 2016

SHARP-TACSY: Triple-Band Tailored Correlated Spectroscopy for Base-to-Sugar Transfer in Nucleic Acid Residues with Intermediate Time Scale Motions

scientific article published on 01 August 2006

Side-Chain Orientation and Hydrogen-Bonding Imprint Supra-τc Motion on the Protein Backbone of Ubiquitin

scientific article published on 01 December 2005

Simultaneous determination of the conformation and relative configuration of archazolide a by using nuclear overhauser effects, J couplings, and residual dipolar couplings.

scientific article published in January 2008

Six subgroups and extensive recent duplications characterize the evolution of the eukaryotic tubulin protein family

scientific article

Specific Methyl Group Protonation for the Measurement of Pharmacophore-Specific Interligand NOE Interactions

scientific article published on 01 January 2008

Specificity and regulation of phosphotyrosine signaling through SH2 domains

scientific article published on 27 May 2020

Stereochemical Determination of Archazolid A and B, Highly Potent Vacuolar-Type ATPase Inhibitors from the MyxobacteriumArchangiumgephyra

scientific article published on 01 October 2006

Structural Basis of the Activity of the Microtubule-Stabilizing Agent Epothilone A Studied by NMR Spectroscopy in Solution

scientific article published on 01 January 2007

Structural characterization of the Asf1-Rtt109 interaction and its role in histone acetylation

scientific article published on 29 December 2017

Structural principles of RNA catalysis in a 2'-5' lariat-forming ribozyme

scientific article

Structural studies on a twin-arginine signal sequence

scientific article

Structure of a Protein-RNA Complex by Solid-State NMR Spectroscopy

scientific article published on 05 February 2020

Structure of the K-turn U4 RNA: a combined NMR and SANS study

scientific article

Structure of the NCoA-1/SRC-1 PAS-B domain bound to the LXXLL motif of the STAT6 transactivation domain

scientific article

Structure-Based Design of Scaffolds Targeting PDE10A by INPHARMA-NMR.

scientific article

Synthesis and biological characterization of argyrin F.

scientific article published on June 2010

Synthesis and biological evaluation of a water-soluble derivative of the potent V-ATPase inhibitor archazolid.

scientific article

TAR-RNA recognition by a novel cyclic aminoglycoside analogue.

scientific article published on 19 July 2006

The High-Resolution Solution Structure of Epothilone A Bound to Tubulin: An Understanding of the Structure–Activity Relationships for a Powerful Class of Antitumor Agents

scholarly article by Teresa Carlomagno et al published 6 June 2003 in Angewandte Chemie International Edition

The INPHARMA Method: Protein-Mediated Interligand NOEs for Pharmacophore Mapping

scientific article published on 01 July 2005

The INPHARMA technique for pharmacophore mapping: A theoretical guide to the method

scientific article published on 12 June 2009

The Tubulin-Bound Conformation of Discodermolide Derived by NMR Studies in Solution Supports a Common Pharmacophore Model for Epothilone and Discodermolide

article

The Tubulin-Bound Structure of the Antimitotic Drug Tubulysin

scientific article published on 01 June 2010

The binding mode of side chain- and C3-modified epothilones to tubulin.

scientific article

The description of protein internal motions aids selection of ligand binding poses by the INPHARMA method ⬇️

scientific article published on September 22, 2012

The guide sRNA sequence determines the activity level of box C/D RNPs

scientific article published on 23 March 2020

The histone chaperone sNASP binds a conserved peptide motif within the globular core of histone H3 through its TPR repeats

scientific article (publication date: 20 April 2016)

The structure of the SOLE element of oskar mRNA

scientific article published on 18 June 2015

The structure of the box C/D enzyme reveals regulation of RNA methylation

scientific article

Towards improved quality of GPCR models by usage of multiple templates and profile-profile comparison

scientific article

Understanding the inhibitory effect of highly potent and selective archazolides binding to the vacuolar ATPase

scientific article

“Kin” HEHAHA Sequences, Heteronuclear Hartmann–Hahn Transfer with Different Bandwidths for Spins I and S

scientific article published on 01 May 1997

List of works by Teresa Carlomagno

13C-Detection in RNA Bases: Revealing Structure−Chemical Shift Relationships

1H, 13C and 15N resonance assignments of the Calmodulin-Munc13-1 peptide complex

1H, 13C, 15N chemical shift assignments of SHP2 SH2 domains in complex with PD-1 immune-tyrosine motifs

1H, 13C, and 15N backbone chemical-shift assignments of SARS-CoV-2 non-structural protein 1 (leader protein)

A Distinct, Sequence-Induced Conformation Is Required for Recognition of the Constitutive Decay Element RNA by Roquin

A Thorough Dynamic Interpretation of Residual Dipolar Couplings in Ubiquitin

A bromodomain-DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT.

A new method for the simultaneous measurement of magnitude and sign of 1DCH and 1DHH dipolar couplings in methylene groups

A novel PH-cT-COSY methodology for measuring JPH coupling constants in unlabeled nucleic acids. application to HIV-2 TAR RNA.

A reducing milieu renders cofilin insensitive to phosphatidylinositol 4,5-bisphosphate (PIP2) inhibition.

A role for central carbon metabolism in mammalian embryonic development?

A suite of solid-state NMR experiments for RNA intranucleotide resonance assignment in a 21 kDa protein-RNA complex

Accounting for conformational variability in protein-ligand docking with NMR-guided rescoring

An NMR-based scoring function improves the accuracy of binding pose predictions by docking by two orders of magnitude

An efficient strategy for the determination of the three-dimensional architecture of ribonucleoprotein complexes by the combination of a few easily accessible NMR and biochemical data: intermolecular recognition in a U4 spliceosomal complex

An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum

Archaea box C/D enzymes methylate two distinct substrate rRNA sequences with different efficiency

Argyrin a reveals a critical role for the tumor suppressor protein p27(kip1) in mediating antitumor activities in response to proteasome inhibition

Assignment and NOE analysis of 2'-hydroxyl protons in RNA: implications for stabilization of RNA A-form duplexes

Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP

Bio-Nuclear Magnetic Resonance

Calculation of the Dependence of Homo- and Heteronuclear3J and2J Scalar Couplings for the Determination of the 2′-Hydroxy Conformation in RNA

Chemical Analysis of a "Miller-Type" Complex Prebiotic Broth : Part II: Gas, Oil, Water and the Oil/Water-Interface

Chemical Analysis of a "Miller-Type" Complex Prebiotic Broth: Part I: Chemical Diversity, Oxygen and Nitrogen Based Polymers

Computational techniques are valuable tools for the discovery of protein-protein interaction inhibitors: the 14-3-3σ case

Conformational analysis of dolastatin 10: an NMR and theoretical approach

Conformational preferences of natural and C3-modified epothilones in aqueous solution

Cross-correlated relaxation for measurement of angles between tensorial interactions.

Crystallography-independent determination of ligand binding modes

Derivation of Dihedral Angles from CH–CH Dipolar–Dipolar Cross-Correlated Relaxation Rates: A C–C Torsion Involving a Quaternary Carbon Atom in Epothilone A Bound to Tubulin

Determination of aliphatic side-chain conformation using cross-correlated relaxation: application to an extraordinarily stable 2'-aminoethoxy-modified oligonucleotide triplex

Drug design for G-protein-coupled receptors by a ligand-based NMR method

Elucidation of the Structure and Intermolecular Interactions of a Reversible Cyclic-Peptide Inhibitor of the Proteasome by NMR Spectroscopy and Molecular Modeling

Errors in the measurement of cross-correlated relaxation rates and how to avoid them

Field dependent dynamic nuclear polarization with radicals in aqueous solution

Guiding protein-ligand docking with different experimental NMR-data.

High-Resolution Solid-State NMR Structure of an Anticancer Agent

Histone chaperone exploits intrinsic disorder to switch acetylation specificity

Hyperpolarized Binding Pocket Nuclear Overhauser Effect for Determination of Competitive Ligand Binding

Identification of a novel pharmacophore for peptide toxins interacting with K+ channels

Influence of the 2'-hydroxyl group conformation on the stability of A-form helices in RNA.

Interaction of Epothilone B (Patupilone) with Microtubules as Detected by Two-Dimensional Solid-State NMR Spectroscopy

Intermolecular protein-RNA interactions revealed by 2D 31P-15N magic angle spinning solid-state NMR spectroscopy

Isotope labeling for studying RNA by solid-state NMR spectroscopy

KappaM-conotoxin RIIIK, structural and functional novelty in a K+ channel antagonist

Ligand-target interactions: what can we learn from NMR?

M3: an integrative framework for structure determination of molecular machines.

Measuring the chi 1 torsion angle in protein by CH-CH cross-correlated relaxation: a new resolution-optimised experiment

Modular architecture of Munc13/calmodulin complexes: dual regulation by Ca2+ and possible function in short-term synaptic plasticity

Molecular Recognition of Epothilones by Microtubules and Tubulin Dimers Revealed by Biochemical and NMR Approaches

Molecular mechanism of SHP2 activation by PD-1 stimulation

NMR assignments of HIV-2 TAR RNA

NMR in natural products: understanding conformation, configuration and receptor interactions ⬇️

New Methylene Specific Experiments for the Measurement of Scalar Spin–Spin Coupling Constants between Protons Attached to13C

On-the-Fly Integration of Data from a Spin-Diffusion-Based NMR Experiment into Protein-Ligand Docking

Optimization of protein samples for NMR using thermal shift assays.

PLUSH TACSY: Homonuclear planar TACSY with two-band selective shaped pulses applied to C?,C? transfer and C?,Caromatic correlations

Peptide ligands selected with CD4-induced epitopes on native dualtropic HIV-1 envelope proteins mimic extracellular coreceptor domains and bind to HIV-1 gp120 independently of coreceptor usage

Phf19 links methylated Lys36 of histone H3 to regulation of Polycomb activity

Phosphotyrosine couples peptide binding and SHP2 activation via a dynamic allosteric network

Present and future of NMR for RNA-protein complexes: a perspective of integrated structural biology

Probing mutation-induced structural perturbations by refinement against residual dipolar couplings: application to the U4 spliceosomal RNP complex

Protein-RNA interfaces probed by 1H-detected MAS solid-state NMR spectroscopy

RNA structure determination by solid-state NMR spectroscopy

Rapid access to RNA resonances by proton-detected solid-state NMR at >100 kHz MAS

Recognition of 2'-O-methylated 3'-end of piRNA by the PAZ domain of a Piwi protein

Recruitment of phospholipase Cγ1 to the non-structural membrane protein pK15 of Kaposi Sarcoma-associated herpesvirus promotes its Src-dependent phosphorylation

Residual dipolar coupling TOCSY for direct through space correlations of base protons and phosphorus nuclei in RNA.

Resonance assignment and secondary structure determination and stability of the recombinant human uteroglobin with heteronuclear multidimensional NMR.

RflM mediates target specificity of the RcsCDB phosphorelay system for transcriptional repression of flagellar synthesis in Salmonella enterica

SHARP-TACSY: Triple-Band Tailored Correlated Spectroscopy for Base-to-Sugar Transfer in Nucleic Acid Residues with Intermediate Time Scale Motions

Side-Chain Orientation and Hydrogen-Bonding Imprint Supra-τc Motion on the Protein Backbone of Ubiquitin

Simultaneous determination of the conformation and relative configuration of archazolide a by using nuclear overhauser effects, J couplings, and residual dipolar couplings.

Six subgroups and extensive recent duplications characterize the evolution of the eukaryotic tubulin protein family

Specific Methyl Group Protonation for the Measurement of Pharmacophore-Specific Interligand NOE Interactions

Specificity and regulation of phosphotyrosine signaling through SH2 domains

Stereochemical Determination of Archazolid A and B, Highly Potent Vacuolar-Type ATPase Inhibitors from the MyxobacteriumArchangiumgephyra

Structural Basis of the Activity of the Microtubule-Stabilizing Agent Epothilone A Studied by NMR Spectroscopy in Solution

Structural characterization of the Asf1-Rtt109 interaction and its role in histone acetylation