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List of works by Matthieu Foll

A Novel Risk Locus at 6p21.3 for Epstein-Barr Virus-Positive Hodgkin Lymphoma

scientific article published on 24 September 2015

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

scientific article published on 09 September 2008

Abstract 3137: NGS-based detection of KRAS hotspot mutations in plasma cell-free DNA of pancreatic cancer cases

Adaptive, convergent origins of the pygmy phenotype in African rainforest hunter-gatherers.

scientific article

An approximate Bayesian computation approach to overcome biases that arise when using amplified fragment length polymorphism markers to study population structure

scientific article published on 27 May 2008

An experimental evaluation of drug-induced mutational meltdown as an antiviral treatment strategy

scientific article

Approximate Bayesian computation

scientific article published in 2013

BAP1 Is Altered by Copy Number Loss, Mutation, and/or Loss of Protein Expression in More Than 70% of Malignant Peritoneal Mesotheliomas

scientific article published on 27 December 2016

Continental-scale footprint of balancing and positive selection in a small rodent (Microtus arvalis).

scientific article

Correcting for ascertainment bias in the inference of population structure

scientific article published on 9 January 2009

Corrigendum re “Genetic Variants Related to Longer Telomere Length are Associated with Increased Risk of Renal Cell Carcinoma” [Eur Urol 2017;72:747–54]

scholarly article published in European Urology

DISENTANGLING THE EFFECTS OF EVOLUTIONARY, DEMOGRAPHIC, AND ENVIRONMENTAL FACTORS INFLUENCING GENETIC STRUCTURE OF NATURAL POPULATIONS: ATLANTIC HERRING AS A CASE STUDY

Detecting and Quantifying Changing Selection Intensities from Time-Sampled Polymorphism Data

scientific article

Detecting loci under selection in a hierarchically structured population

scientific article published on 22 July 2009

Detection of convergent genome-wide signals of adaptation to tropical forests in humans

scientific article

Development of Sensitive Droplet Digital PCR Assays for Detecting Urinary <i>TERT</i> Promoter Mutations as Non-Invasive Biomarkers for Detection of Urothelial Cancer

scientific article published on 27 November 2020

EURACAN/IASLC Proposals for Updating the Histologic Classification of Pleural Mesothelioma: Towards a More Multidisciplinary Approach

scientific article published on 20 September 2019

Enhanced AFLP genome scans detect local adaptation in high‐altitude populations of a small rodent (Microtus arvalis) ⬇️

scientific article published on February 24, 2011

Estimating population structure from AFLP amplification intensity ⬇️

scientific article published on September 27, 2010

Evolutionary forces shaping genomic islands of population differentiation in humans

scientific article

Exome sequencing identifies germline variants in DIS3 in familial multiple myeloma.

scientific article

Genetic Variants Related to Longer Telomere Length are Associated with Increased Risk of Renal Cell Carcinoma ⬇️

scientific article published on 7 August 2017

Genome-wide association study identifies multiple risk loci for renal cell carcinoma ⬇️

scientific article

Genomic analysis of head and neck cancer cases from two high incidence regions.

scientific article

Genomic data reveal a complex making of humans

scientific article

Identification of Circulating Tumor DNA for the Early Detection of Small-cell Lung Cancer

scientific article

Identifying the environmental factors that determine the genetic structure of populations

scientific article

In defence of model-based inference in phylogeography.

scientific article

Inferring the age of a fixed beneficial allele

scientific article published on 17 November 2015

Influenza virus drug resistance: a time-sampled population genetics perspective

scientific article (publication date: February 2014)

Integrative and comparative genomic analyses identify clinically relevant pulmonary carcinoid groups and unveil the supra-carcinoids

scientific article published on 20 August 2019

Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors.

scientific article published on 13 March 2018

KRAS mutations in blood circulating cell-free DNA: a pancreatic cancer case-control

scientific article published on October 2016

Likelihood-Free Inference in High-Dimensional Models

scientific article

Linking a mutation to survival in wild mice

scientific article published on 31 January 2019

Long-distance dispersal suppresses introgression of local alleles during range expansions

scientific article published on 31 August 2016

Molecular Subtypes of Pulmonary Large-cell Neuroendocrine Carcinoma Predict Chemotherapy Treatment Outcome

scientific article

Needlestack: an ultra-sensitive variant caller for multi-sample next generation sequencing data

scientific article published on 20 April 2020

Neutral and adaptive drivers of microgeographic genetic divergence within continuous populations: the case of the neotropical tree Eperua falcata (Aubl.).

scientific article

Positive Selection Drives Preferred Segment Combinations during Influenza Virus Reassortment.

scientific article published on 23 February 2015

Quantifying polymorphism and divergence from epigenetic data: a framework for inferring the action of selection.

scientific article

Quantifying population structure using the F-model

scientific article published on 13 May 2010

Rare Circulating Cells in Familial Waldenström Macroglobulinemia Displaying the MYD88 L265P Mutation Are Enriched by Epstein-Barr Virus Immortalization.

scientific article published on 9 September 2015

Redefining malignant pleural mesothelioma types as a continuum uncovers immune-vascular interactions

scientific article published on 21 October 2019

Redefining mesothelioma types as a continuum uncovers the immune and vascular systems as key players in the diagnosis and prognosis of this disease

Robust demographic inference from genomic and SNP data

scientific article (publication date: October 2013)

SPLATCHE2: a spatially explicit simulation framework for complex demography, genetic admixture and recombination ⬇️

scientific article published on October 17, 2010

Sex specific associations in genome wide association analysis of renal cell carcinoma

scientific article published on 23 June 2019

The Evolutionary History of Nebraska Deer Mice: Local Adaptation in the Face of Strong Gene Flow.

scientific article published on 15 January 2018

The fitness consequences of genetic variation in wild populations of mice

The influence of obesity-related factors in the etiology of renal cell carcinoma-A mendelian randomization study ⬇️

scientific article published on 03 January 2019

The past, present and future of genomic scans for selection

scientific article

Thinking too positive? Revisiting current methods of population genetic selection inference

scientific article

Urinary TERT promoter mutations as non-invasive biomarkers for the comprehensive detection of urothelial cancer

scientific article published on 20 May 2019

WFABC: a Wright-Fisher ABC-based approach for inferring effective population sizes and selection coefficients from time-sampled data

scientific article

Widespread signals of convergent adaptation to high altitude in Asia and america

scientific article

Worldwide Population Structure, Long-Term Demography, and Local Adaptation of Helicobacter pylori.

scientific article published on 20 May 2015

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

scientific article

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