List of works - Vasily Ogryzko

3'-5' phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo

scientific article

A histone deacetylase inhibitor potentiates retinoid receptor action in embryonal carcinoma cells

scientific article published on October 1997

A lesson in excellence; advancedin situ hybridization and immunocytochemistry, Cold Spring Harbor 1995

scientific article published in March 1996

A p300/CBP-associated factor that competes with the adenoviral oncoprotein E1A

scientific article

A quantum-theoretical approach to the phenomenon of directed mutations in bacteria (hypothesis)

scientific article published in July 1997

A vector design that allows fast and convenient production of differently tagged proteins

scientific article

A viral mechanism for inhibition of p300 and PCAF acetyltransferase activity

scientific article published on February 1999

Analysis of human histone H2AZ deposition in vivo argues against its direct role in epigenetic templating mechanisms

scientific article

Analysis of interaction partners of H4 histone by a new proteomics approach

scientific article

Antisense Inhibition of CAS, the Human Homologue of the Yeast Chromosome Segregation Gene CSE1, Interferes with Mitosis in HeLa Cells

scientific article published in August 1997

Biologically inspired path to quantum computer

scientific article published on 18 December 2014

Coactivators p300 and PCAF physically and functionally interact with the foamy viral trans-activator

scientific article

Codon optimization of the BirA enzyme gene leads to higher expression and an improved efficiency of biotinylation of target proteins in mammalian cells.

scientific article published on 17 January 2005

Comment on Masanari Asano et al.: A model of epigenetic evolution based on theory of open quantum systems

scientific article published on 24 October 2013

Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis

scientific article

Distinct distribution of ectopically expressed histone variants H2A.Bbd and MacroH2A in open and closed chromatin domains

scientific article

Erwin Schroedinger, Francis Crick and epigenetic stability

scientific article

Exploring the use of dimethylsulfate for in vivo proteome footprinting

scientific article published on 15 December 2010

High resolution characterization of formamidopyrimidine-DNA glycosylase interaction with its substrate by chemical cross-linking and mass spectrometry using substrate analogs.

scientific article published on 22 August 2006

Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells

scientific article

Histone-like TAFs within the PCAF histone acetylase complex

scientific article

Hsp90 Binds and Regulates Gcn2, the Ligand-Inducible Kinase of the α Subunit of Eukaryotic Translation Initiation Factor 2.

scientific article published in March 2000

Immunoaffinity purification of mammalian protein complexes

scientific article (publication date: 2003)

In vivo Biotinylation Based Method for the Study of Protein-Protein Proximity in Eukaryotic Cells.

scientific article

Inhibition of p300 histone acetyltransferase by viral interferon regulatory factor

scientific article

Mammalian expression vectors for metabolic biotinylation tandem affinity tagging by co-expression in cis of a mammalian codon-optimized BirA biotin ligase.

scientific article

Metastable macromolecular complexes containing high mobility group nucleosome-binding chromosomal proteins in HeLa nuclei

scientific article

Molecular turnover, the H3.3 dilemma and organismal aging (hypothesis)

scientific article

Multiple displacement amplification for complex mixtures of DNA fragments

scientific article

New Interactors of the Truncated EBNA-LP Protein Identified by Mass Spectrometry in P3HR1 Burkitt's Lymphoma Cells

scientific article published on 5 January 2018

Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells

scientific article published on 8 May 2006

PUB-MS: a mass spectrometry-based method to monitor protein-protein proximity in vivo

scientific article

PUB-NChIP--"in vivo biotinylation" approach to study chromatin in proximity to a protein of interest

scientific article

Properties of the glucocorticoid modulatory element binding proteins GMEB-1 and -2: potential new modifiers of glucocorticoid receptor transactivation and members of the family of KDWK proteins

scientific article (publication date: July 2000)

Proximity Utilizing Biotinylation of Nuclear Proteins in vivo.

scientific article

Quantum biology at the cellular level—Elements of the research program

scholarly article by Michael Bordonaro & Vasily Ogryzko published April 2013 in BioSystems

Regulation of activity of the transcription factor GATA-1 by acetylation

scientific article published on December 1998

Regulation of an inducible promoter by an HP1beta-HP1gamma switch

scientific article published on February 2008

Regulation of histone acetyltransferases p300 and PCAF by the bHLH protein twist and adenoviral oncoprotein E1A

scientific article (publication date: 5 February 1999)

Restoration of DNA-binding and growth-suppressive activity of mutant forms of p53 via a PCAF-mediated acetylation pathway

scientific article published on November 2010

Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development

scientific article

The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation

scientific article

The p400 complex is an essential E1A transformation target

scientific article (publication date: 10 August 2001)

The retinoblastoma protein binds the promoter of the survival gene bcl-2 and regulates its transcription in epithelial cells through transcription factor AP-2.

scientific article published on November 2002

The transcriptional coactivators p300 and CBP are histone acetyltransferases

scientific article (publication date: 29 November 1996)

Use of in vivo biotinylation for chromatin immunoprecipitation

scientific article published in June 2011

Use of protein biotinylation in vivo for chromatin immunoprecipitation

scientific article

Use of protein biotinylation in vivo for immunoelectron microscopic localization of a specific protein isoform

scientific article

When an Intramolecular Disulfide Bridge Governs the Interaction of DUOX2 with Its Partner DUOXA2

scientific article

Xenopus NF-Y pre-sets chromatin to potentiate p300 and acetylation-responsive transcription from the Xenopus hsp70 promoter in vivo

scientific article

YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity

scientific article published on 22 June 2007

ZNF555 protein binds to transcriptional activator site of 4qA allele and ANT1: potential implication in Facioscapulohumeral dystrophy

scientific article published on 15 July 2015

p300 and p300/cAMP-response element-binding protein-associated factor acetylate the androgen receptor at sites governing hormone-dependent transactivation

scientific article

List of works by Vasily Ogryzko

3'-5' phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo

A histone deacetylase inhibitor potentiates retinoid receptor action in embryonal carcinoma cells

A lesson in excellence; advancedin situ hybridization and immunocytochemistry, Cold Spring Harbor 1995

A p300/CBP-associated factor that competes with the adenoviral oncoprotein E1A

A quantum-theoretical approach to the phenomenon of directed mutations in bacteria (hypothesis)

A vector design that allows fast and convenient production of differently tagged proteins

A viral mechanism for inhibition of p300 and PCAF acetyltransferase activity

Analysis of human histone H2AZ deposition in vivo argues against its direct role in epigenetic templating mechanisms

Analysis of interaction partners of H4 histone by a new proteomics approach

Antisense Inhibition of CAS, the Human Homologue of the Yeast Chromosome Segregation Gene CSE1, Interferes with Mitosis in HeLa Cells

Biologically inspired path to quantum computer

Coactivators p300 and PCAF physically and functionally interact with the foamy viral trans-activator

Codon optimization of the BirA enzyme gene leads to higher expression and an improved efficiency of biotinylation of target proteins in mammalian cells.

Comment on Masanari Asano et al.: A model of epigenetic evolution based on theory of open quantum systems

Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis

Distinct distribution of ectopically expressed histone variants H2A.Bbd and MacroH2A in open and closed chromatin domains

Erwin Schroedinger, Francis Crick and epigenetic stability

Exploring the use of dimethylsulfate for in vivo proteome footprinting

High resolution characterization of formamidopyrimidine-DNA glycosylase interaction with its substrate by chemical cross-linking and mass spectrometry using substrate analogs.

Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells

Histone-like TAFs within the PCAF histone acetylase complex

Hsp90 Binds and Regulates Gcn2, the Ligand-Inducible Kinase of the α Subunit of Eukaryotic Translation Initiation Factor 2.

Immunoaffinity purification of mammalian protein complexes

In vivo Biotinylation Based Method for the Study of Protein-Protein Proximity in Eukaryotic Cells.

Inhibition of p300 histone acetyltransferase by viral interferon regulatory factor

Mammalian expression vectors for metabolic biotinylation tandem affinity tagging by co-expression in cis of a mammalian codon-optimized BirA biotin ligase.

Metastable macromolecular complexes containing high mobility group nucleosome-binding chromosomal proteins in HeLa nuclei

Molecular turnover, the H3.3 dilemma and organismal aging (hypothesis)

Multiple displacement amplification for complex mixtures of DNA fragments

New Interactors of the Truncated EBNA-LP Protein Identified by Mass Spectrometry in P3HR1 Burkitt's Lymphoma Cells

Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells

PUB-MS: a mass spectrometry-based method to monitor protein-protein proximity in vivo

PUB-NChIP--"in vivo biotinylation" approach to study chromatin in proximity to a protein of interest

Properties of the glucocorticoid modulatory element binding proteins GMEB-1 and -2: potential new modifiers of glucocorticoid receptor transactivation and members of the family of KDWK proteins

Proximity Utilizing Biotinylation of Nuclear Proteins in vivo.

Quantum biology at the cellular level—Elements of the research program

Regulation of activity of the transcription factor GATA-1 by acetylation

Regulation of an inducible promoter by an HP1beta-HP1gamma switch

Regulation of histone acetyltransferases p300 and PCAF by the bHLH protein twist and adenoviral oncoprotein E1A

Restoration of DNA-binding and growth-suppressive activity of mutant forms of p53 via a PCAF-mediated acetylation pathway

Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development

The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation

The p400 complex is an essential E1A transformation target

The retinoblastoma protein binds the promoter of the survival gene bcl-2 and regulates its transcription in epithelial cells through transcription factor AP-2.

The transcriptional coactivators p300 and CBP are histone acetyltransferases

Use of in vivo biotinylation for chromatin immunoprecipitation

Use of protein biotinylation in vivo for chromatin immunoprecipitation

Use of protein biotinylation in vivo for immunoelectron microscopic localization of a specific protein isoform

When an Intramolecular Disulfide Bridge Governs the Interaction of DUOX2 with Its Partner DUOXA2

Xenopus NF-Y pre-sets chromatin to potentiate p300 and acetylation-responsive transcription from the Xenopus hsp70 promoter in vivo

YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity

ZNF555 protein binds to transcriptional activator site of 4qA allele and ANT1: potential implication in Facioscapulohumeral dystrophy

p300 and p300/cAMP-response element-binding protein-associated factor acetylate the androgen receptor at sites governing hormone-dependent transactivation