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List of works by Kenny Helsens

A la carte proteomics with an emphasis on gel-free techniques

scientific article published on August 2007

A stringent approach to improve the quality of nitrotyrosine peptide identifications

scientific article published on 7 February 2011

Analysis of the resolution limitations of peptide identification algorithms

scientific article published on 26 October 2011

Assessing a novel microfluidic interface for shotgun proteome analyses

scientific article published in July 2007

Bioinformatics analysis of a Saccharomyces cerevisiae N-terminal proteome provides evidence of alternative translation initiation and post-translational N-terminal acetylation

scientific article

Complementary positional proteomics for screening substrates of endo- and exoproteases

scientific article

Erratum: MS-driven protease substrate degradomics

scholarly article published in Proteomics

Erratum: ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics

scholarly article published in Proteomics

Getting a grip on proteomics data - Proteomics Data Collection (ProDaC).

scientific article

Human Proteinpedia enables sharing of human protein data

scientific article

Implementation and application of a versatile clustering tool for tandem mass spectrometry data

scientific article

Improved recovery of proteome-informative, protein N-terminal peptides by combined fractional diagonal chromatography (COFRADIC).

scientific article published in April 2008

Improved visualization of protein consensus sequences by iceLogo

scholarly article by Niklaas Colaert et al published November 2009 in Nature Methods

LNCipedia: a database for annotated human lncRNA transcript sequences and structures

scientific article (publication date: 2013)

MS-driven protease substrate degradomics

scientific article published on March 2010

MascotDatfile: an open-source library to fully parse and analyse MASCOT MS/MS search results

scientific article published in February 2007

NatF contributes to an evolutionary shift in protein N-terminal acetylation and is important for normal chromosome segregation

scientific article

Proteome-wide substrate analysis indicates substrate exclusion as a mechanism to generate caspase-7 versus caspase-3 specificity

scientific journal article

Rover: a tool to visualize and validate quantitative proteomics data from different sources

scientific article

Sigpep: calculating unique peptide signature transition sets in a complete proteome background

scientific article

The Online Protein Processing Resource (TOPPR): a database and analysis platform for protein processing events

scientific article (publication date: 2013)

compomics-utilities: an open-source Java library for computational proteomics

scientific article

jTraML: an open source Java API for TraML, the PSI standard for sharing SRM transitions

scientific article published on 13 October 2011

ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics.

scientific article

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