List of works - Angus Silver

25th Annual Computational Neuroscience Meeting: CNS-2016

scientific article

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3.

scientific article

A Commitment to Open Source in Neuroscience.

scientific article published in December 2017

A compact Acousto-Optic Lens for 2D and 3D femtosecond based 2-photon microscopy.

scientific article

A declarative model specification system allowing NeuroML to be extended with user-defined component types.

scientific article published on 16 July 2012

Advanced 3D visualisation of detailed neuronal models using the Open Source Brain repository and interaction with other neuroinformatics resources.

scientific article published on 8 July 2013

Artifacts in calcium measurement: recognition and remedies

scientific article published on 01 August 1991

Assessing the Role of Inhibition in Stabilizing Neocortical Networks Requires Large-Scale Perturbation of the Inhibitory Population

scientific article published on 26 October 2017

Assessing the role of inhibition in stabilizing neocortical networks requires large-scale perturbation of the inhibitory population

Automated code generation from LEMS, the general purpose model specification language underpinning NeuroML2.

scientific article published on 21 July 2014

Bassoon speeds vesicle reloading at a central excitatory synapse.

scientific article

Calcium hotspots caused by L-channel clustering promote morphological changes in neuronal growth cones

scientific article published in Nature

Data-driven modeling of synaptic transmission and integration

scientific article

Deactivation and desensitization of non-NMDA receptors in patches and the time course of EPSCs in rat cerebellar granule cells

scientific article published on 01 May 1996

Desensitization properties of AMPA receptors at the cerebellar mossy fiber granule cell synapse.

scientific article published in August 2007

Elevated cytosolic calcium in the growth cone inhibits neurite elongation in neuroblastoma cells: correlation of behavioral states with cytosolic calcium concentration

scientific article published on November 1989

Errors in the estimation of the variance: implications for multiple-probability fluctuation analysis

scientific article published on 27 December 2005

Estimation of nonuniform quantal parameters with multiple-probability fluctuation analysis: theory, application and limitations.

scientific article published in December 2003

Estimation of quantal parameters with multiple-probability fluctuation analysis

scientific article published on 01 January 2007

Expression of T-type calcium current precedes neurite extension in neuroblastoma cells

scientific article published on January 1, 1991

Extracting quantal properties of transmission at central synapses

scientific article published on 01 January 2016

Fast vesicle reloading and a large pool sustain high bandwidth transmission at a central synapse.

scientific article published in February 2006

Flashy science: controlling neural function with light.

scientific article

Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells

scientific article published on 27 April 2016

GABA spillover from single inhibitory axons suppresses low-frequency excitatory transmission at the cerebellar glomerulus.

scientific article

Gap junctions compensate for sublinear dendritic integration in an inhibitory network.

scientific article published on 8 March 2012

Geppetto: a reusable modular open platform for exploring neuroscience data and models

scientific article published on 10 September 2018

Glutamate spillover suppresses inhibition by activating presynaptic mGluRs

scientific article published in Nature

Glutamate uptake from the synaptic cleft does not shape the decay of the non-NMDA component of the synaptic current ⬇️

scientific article published on September 1, 1993

Glutamate-bound NMDARs arising from in vivo-like network activity extend spatio-temporal integration in a L5 cortical pyramidal cell model

scientific article

Intracellular ion imaging using fluorescent dyes: artefacts and limits to resolution

scientific article published on 01 April 1992

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2.

scientific article

Mitogens induce calcium transients in both dividing and terminally differentiating keratinocytes ⬇️

scientific article published on June 1, 1991

Monitoring synaptic and neuronal activity in 3D with synthetic and genetic indicators using a compact acousto-optic lens two-photon microscope

scientific article

MorphML: level 1 of the NeuroML standards for neuronal morphology data and model specification.

scientific article

NMDA receptors with incomplete Mg²⁺ block enable low-frequency transmission through the cerebellar cortex.

scientific article

Nanoscale distribution of presynaptic Ca(2+) channels and its impact on vesicular release during development.

scientific article

Network structure within the cerebellar input layer enables lossless sparse encoding.

scientific article

NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail

scientific article

NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data.

scientific article published on 4 April 2018

Non-NMDA glutamate receptor occupancy and open probability at a rat cerebellar synapse with single and multiple release sites

scientific article published on 01 July 1996

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

scientific article published on 11 June 2019

Physical determinants of vesicle mobility and supply at a central synapse

scientific article published on 19 August 2016

Random-access scanning microscopy for 3D imaging in awake behaving animals.

scientific article

Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input.

scientific article published on August 2010

Rapid vesicular release, quantal variability, and spillover contribute to the precision and reliability of transmission at a glomerular synapse.

scientific article

Rapid-time-course miniature and evoked excitatory currents at cerebellar synapses in situ.

scientific article

Re-evaluating Circuit Mechanisms Underlying Pattern Separation

scientific article published on 01 February 2019

Reading dendritic activity with gap junctions.

scientific article published in December 2014

Real-time 3D movement correction for two-photon imaging in behaving animals

scientific article published on 01 June 2020

Shunting inhibition modulates neuronal gain during synaptic excitation.

scientific article published in May 2003

Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks

scientific article

Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks

Spillover of glutamate onto synaptic AMPA receptors enhances fast transmission at a cerebellar synapse.

scientific article published in August 2002

Sustaining rapid vesicular release at active zones: potential roles for vesicle tethering

scientific article

Synaptic and cellular properties of the feedforward inhibitory circuit within the input layer of the cerebellar cortex.

scientific article published on September 2008

Synaptic depression enables neuronal gain control

scientific article

The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience.

scientific article published on 16 July 2012

The contribution of single synapses to sensory representation in vivo.

scientific article

The density of AMPA receptors activated by a transmitter quantum at the climbing fibre-Purkinje cell synapse in immature rats.

scientific article published on 28 March 2003

Tonically active GABA A receptors: modulating gain and maintaining the tone.

scientific article published on May 2004

Toward standard practices for sharing computer code and programs in neuroscience.

scientific article

Towards standard practices for sharing computer code and programs in neuroscience

scholarly article published 24 March 2016

Using NeuroML and neuroConstruct to build neuronal network models for multiple simulators.

scientific article published on 6 July 2007

Visualizing, editing and simulating neuronal models with the Open Source Brain 3D explorer

scientific article

libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience.

scientific article

List of works by Angus Silver

25th Annual Computational Neuroscience Meeting: CNS-2016

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3.

A Commitment to Open Source in Neuroscience.

A compact Acousto-Optic Lens for 2D and 3D femtosecond based 2-photon microscopy.

A declarative model specification system allowing NeuroML to be extended with user-defined component types.

Advanced 3D visualisation of detailed neuronal models using the Open Source Brain repository and interaction with other neuroinformatics resources.

Artifacts in calcium measurement: recognition and remedies

Assessing the Role of Inhibition in Stabilizing Neocortical Networks Requires Large-Scale Perturbation of the Inhibitory Population

Assessing the role of inhibition in stabilizing neocortical networks requires large-scale perturbation of the inhibitory population

Automated code generation from LEMS, the general purpose model specification language underpinning NeuroML2.

Bassoon speeds vesicle reloading at a central excitatory synapse.

Calcium hotspots caused by L-channel clustering promote morphological changes in neuronal growth cones

Data-driven modeling of synaptic transmission and integration

Deactivation and desensitization of non-NMDA receptors in patches and the time course of EPSCs in rat cerebellar granule cells

Desensitization properties of AMPA receptors at the cerebellar mossy fiber granule cell synapse.

Elevated cytosolic calcium in the growth cone inhibits neurite elongation in neuroblastoma cells: correlation of behavioral states with cytosolic calcium concentration

Errors in the estimation of the variance: implications for multiple-probability fluctuation analysis

Estimation of nonuniform quantal parameters with multiple-probability fluctuation analysis: theory, application and limitations.

Estimation of quantal parameters with multiple-probability fluctuation analysis

Expression of T-type calcium current precedes neurite extension in neuroblastoma cells

Extracting quantal properties of transmission at central synapses

Fast vesicle reloading and a large pool sustain high bandwidth transmission at a central synapse.

Flashy science: controlling neural function with light.

Functional Properties of Dendritic Gap Junctions in Cerebellar Golgi Cells

GABA spillover from single inhibitory axons suppresses low-frequency excitatory transmission at the cerebellar glomerulus.

Gap junctions compensate for sublinear dendritic integration in an inhibitory network.

Geppetto: a reusable modular open platform for exploring neuroscience data and models

Glutamate spillover suppresses inhibition by activating presynaptic mGluRs

Glutamate uptake from the synaptic cleft does not shape the decay of the non-NMDA component of the synaptic current ⬇️

Glutamate-bound NMDARs arising from in vivo-like network activity extend spatio-temporal integration in a L5 cortical pyramidal cell model

Intracellular ion imaging using fluorescent dyes: artefacts and limits to resolution

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2.

Mitogens induce calcium transients in both dividing and terminally differentiating keratinocytes ⬇️

Monitoring synaptic and neuronal activity in 3D with synthetic and genetic indicators using a compact acousto-optic lens two-photon microscope

MorphML: level 1 of the NeuroML standards for neuronal morphology data and model specification.

NMDA receptors with incomplete Mg²⁺ block enable low-frequency transmission through the cerebellar cortex.

Nanoscale distribution of presynaptic Ca(2+) channels and its impact on vesicular release during development.

Network structure within the cerebellar input layer enables lossless sparse encoding.

NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail

NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data.

Non-NMDA glutamate receptor occupancy and open probability at a rat cerebellar synapse with single and multiple release sites

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

Physical determinants of vesicle mobility and supply at a central synapse

Random-access scanning microscopy for 3D imaging in awake behaving animals.

Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input.

Rapid vesicular release, quantal variability, and spillover contribute to the precision and reliability of transmission at a glomerular synapse.

Rapid-time-course miniature and evoked excitatory currents at cerebellar synapses in situ.

Re-evaluating Circuit Mechanisms Underlying Pattern Separation

Reading dendritic activity with gap junctions.

Real-time 3D movement correction for two-photon imaging in behaving animals

Shunting inhibition modulates neuronal gain during synaptic excitation.

Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks

Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks

Spillover of glutamate onto synaptic AMPA receptors enhances fast transmission at a cerebellar synapse.

Sustaining rapid vesicular release at active zones: potential roles for vesicle tethering

Synaptic and cellular properties of the feedforward inhibitory circuit within the input layer of the cerebellar cortex.

Synaptic depression enables neuronal gain control

The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience.

The contribution of single synapses to sensory representation in vivo.

The density of AMPA receptors activated by a transmitter quantum at the climbing fibre-Purkinje cell synapse in immature rats.

Tonically active GABA A receptors: modulating gain and maintaining the tone.

Toward standard practices for sharing computer code and programs in neuroscience.

Towards standard practices for sharing computer code and programs in neuroscience

Using NeuroML and neuroConstruct to build neuronal network models for multiple simulators.

Visualizing, editing and simulating neuronal models with the Open Source Brain 3D explorer

libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience.