List of works - Chris Newbold

Genome sequence of the human malaria parasite Plasmodium falciparum

scientific article

Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes

scientific article (publication date: 14 July 1995)

Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13

scientific article

Rifins: a second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum

scientific article (publication date: 3 August 1999)

Parasite antigens on the infected red cell surface are targets for naturally acquired immunity to malaria.

scientific article published on March 1998

Relation between severe malaria morbidity in children and level of Plasmodium falciparum transmission in Africa

scientific article published on June 1997

P. falciparum rosetting mediated by a parasite-variant erythrocyte membrane protein and complement-receptor 1

scientific article (publication date: 17 July 1997)

Averting a malaria disaster

scientific article published on June 1999

Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia

scientific article published on 28 April 2013

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

scientific article (publication date: 19 July 2012)

ABACAS: algorithm-based automatic contiguation of assembled sequences

scientific article published on 3 June 2009

Exported proteins required for virulence and rigidity of Plasmodium falciparum-infected human erythrocytes

scientific article (publication date: 11 July 2008)

The genome of the simian and human malaria parasite Plasmodium knowlesi

scientific article

REAPR: a universal tool for genome assembly evaluation

scientific article

Immunity to non-cerebral severe malaria is acquired after one or two infections

scientific article (publication date: March 1999)

Antigenic variation at the infected red cell surface in malaria.

scientific article

The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum

scientific article published in August 1999

New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq

scientific article

A simple RNA analysis method shows var and rif multigene family expression patterns in Plasmodium falciparum

scientific article published in February 2000

A comprehensive evaluation of rodent malaria parasite genomes and gene expression

scientific article

Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology

scientific article published on 18 June 2010

The binding site on ICAM-1 for Plasmodium falciparum-infected erythrocytes overlaps, but is distinct from, the LFA-1-binding site

scientific article

Genome variation and evolution of the malaria parasite Plasmodium falciparum

scientific article published on 10 December 2006

High incidence of malaria in alpha-thalassaemic children

scientific article published in October 1996

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

scientific article published on 7 June 2012

Host-mediated regulation of superinfection in malaria

scientific article

Patterns of gene recombination shape var gene repertoires in Plasmodium falciparum: comparisons of geographically diverse isolates

scientific article published on 7 February 2007

Identification of a Plasmodium falciparum intercellular adhesion molecule-1 binding domain: a parasite adhesion trait implicated in cerebral malaria

scientific article

Variant antigens and endothelial receptor adhesion in Plasmodium falciparum

scientific article published on April 1996

Plasmodium falciparum variant surface antigen expression patterns during malaria

scientific article

Plasmodium falciparum-infected erythrocytes: agglutination by diverse Kenyan plasma is associated with severe disease and young host age.

scientific article

A high frequency African coding polymorphism in the N-terminal domain of ICAM-1 predisposing to cerebral malaria in Kenya.

scientific article published on August 1997

Cerebral malaria: the sequestration hypothesis

scientific article published in October 1994

Periodicity and space-time clustering of severe childhood malaria on the coast of Kenya

scientific article published on July 1993

Genome sequencing of chimpanzee malaria parasites reveals possible pathways of adaptation to human hosts.

scientific article

Plasmodium vevax and P. falciparum: Biological interactions and the possibility of cross-species immunity

scientific article published in June 1997

The interaction between Plasmodium falciparum and P. vivax in children on Espiritu Santo island, Vanuatu

scientific article published on November 1996

Characterization of the pathway for transport of the cytoadherence-mediating protein, PfEMP1, to the host cell surface in malaria parasite-infected erythrocytes.

scientific article published in November 2003

A study of var gene transcription in vitro using universal var gene primers

scientific article published in January 2000

Variable var transition rates underlie antigenic variation in malaria

scholarly article

Transient cross-reactive immune responses can orchestrate antigenic variation in malaria

scientific article

Plasmodium falciparum: the human agglutinating antibody response to the infected red cell surface is predominantly variant specific

scientific article

Population genomic scan for candidate signatures of balancing selection to guide antigen characterization in malaria parasites

scientific article

A well-conserved Plasmodium falciparum var gene shows an unusual stage-specific transcript pattern.

scientific article

Antigenic variation in Plasmodium falciparum malaria involves a highly structured switching pattern

scientific article

Var gene diversity in Plasmodium falciparum is generated by frequent recombination events

scientific article published in October 2000

Analysis of adhesive domains from the A4VAR Plasmodium falciparum erythrocyte membrane protein-1 identifies a CD36 binding domain

scientific article published in November 1998

A comprehensive evaluation of assembly scaffolding tools

scientific article published on March 3, 2014

Cytoadherence, pathogenesis and the infected red cell surface in Plasmodium falciparum.

scientific article

Plasmodium falciparum antigenic variation. Mapping mosaic var gene sequences onto a network of shared, highly polymorphic sequence blocks

scientific article published on 21 April 2008

List of works by Chris Newbold

Genome sequence of the human malaria parasite Plasmodium falciparum

Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes

Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13

Rifins: a second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum

Parasite antigens on the infected red cell surface are targets for naturally acquired immunity to malaria.

Relation between severe malaria morbidity in children and level of Plasmodium falciparum transmission in Africa

P. falciparum rosetting mediated by a parasite-variant erythrocyte membrane protein and complement-receptor 1

Averting a malaria disaster

Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

ABACAS: algorithm-based automatic contiguation of assembled sequences

Exported proteins required for virulence and rigidity of Plasmodium falciparum-infected human erythrocytes

The genome of the simian and human malaria parasite Plasmodium knowlesi

REAPR: a universal tool for genome assembly evaluation

Immunity to non-cerebral severe malaria is acquired after one or two infections

Antigenic variation at the infected red cell surface in malaria.

The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum

New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq

A simple RNA analysis method shows var and rif multigene family expression patterns in Plasmodium falciparum

A comprehensive evaluation of rodent malaria parasite genomes and gene expression

Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology

The binding site on ICAM-1 for Plasmodium falciparum-infected erythrocytes overlaps, but is distinct from, the LFA-1-binding site

Genome variation and evolution of the malaria parasite Plasmodium falciparum

High incidence of malaria in alpha-thalassaemic children

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

Host-mediated regulation of superinfection in malaria

Patterns of gene recombination shape var gene repertoires in Plasmodium falciparum: comparisons of geographically diverse isolates

Identification of a Plasmodium falciparum intercellular adhesion molecule-1 binding domain: a parasite adhesion trait implicated in cerebral malaria

Variant antigens and endothelial receptor adhesion in Plasmodium falciparum

Plasmodium falciparum variant surface antigen expression patterns during malaria

Plasmodium falciparum-infected erythrocytes: agglutination by diverse Kenyan plasma is associated with severe disease and young host age.

A high frequency African coding polymorphism in the N-terminal domain of ICAM-1 predisposing to cerebral malaria in Kenya.

Cerebral malaria: the sequestration hypothesis

Periodicity and space-time clustering of severe childhood malaria on the coast of Kenya

Genome sequencing of chimpanzee malaria parasites reveals possible pathways of adaptation to human hosts.

Plasmodium vevax and P. falciparum: Biological interactions and the possibility of cross-species immunity

The interaction between Plasmodium falciparum and P. vivax in children on Espiritu Santo island, Vanuatu

Characterization of the pathway for transport of the cytoadherence-mediating protein, PfEMP1, to the host cell surface in malaria parasite-infected erythrocytes.

A study of var gene transcription in vitro using universal var gene primers

Variable var transition rates underlie antigenic variation in malaria

Transient cross-reactive immune responses can orchestrate antigenic variation in malaria

Plasmodium falciparum: the human agglutinating antibody response to the infected red cell surface is predominantly variant specific

Population genomic scan for candidate signatures of balancing selection to guide antigen characterization in malaria parasites

A well-conserved Plasmodium falciparum var gene shows an unusual stage-specific transcript pattern.

Antigenic variation in Plasmodium falciparum malaria involves a highly structured switching pattern

Var gene diversity in Plasmodium falciparum is generated by frequent recombination events

Analysis of adhesive domains from the A4VAR Plasmodium falciparum erythrocyte membrane protein-1 identifies a CD36 binding domain

A comprehensive evaluation of assembly scaffolding tools

Cytoadherence, pathogenesis and the infected red cell surface in Plasmodium falciparum.

Plasmodium falciparum antigenic variation. Mapping mosaic var gene sequences onto a network of shared, highly polymorphic sequence blocks