Search filters

List of works by Gerton Lunter

8.2% of the Human genome is constrained: variation in rates of turnover across functional element classes in the human lineage

scientific article

A "Long Indel" model for evolutionary sequence alignment

scientific article published on 23 December 2003

A Phylogenetic Codon Substitution Model for Antibody Lineages

scientific article published on 17 March 2017

A fine-scale chimpanzee genetic map from population sequencing

scientific article

A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species

scientific article (publication date: 2012)

A nucleotide substitution model with nearest-neighbour interactions

scientific article published in August 2004

A unified haplotype-based method for accurate and comprehensive variant calling

A unified haplotype-based method for accurate and comprehensive variant calling

scientific article published on 29 March 2021

Accelerated evolution of the Prdm9 speciation gene across diverse metazoan taxa

scientific article (publication date: December 2009)

Accurate reconstruction of insertion-deletion histories by statistical phylogenetics

scientific article

An efficient algorithm for statistical multiple alignment on arbitrary phylogenetic trees

scientific article published in January 2003

An equivariant Bayesian convolutional network predicts recombination hotspots and accurately resolves binding motifs

scientific article published on 01 July 2019

Analysis of B Cell Repertoire Dynamics Following Hepatitis B Vaccination in Humans, and Enrichment of Vaccine-specific Antibody Sequences

scientific article

B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.

scientific article published on 16 June 2016

BCR repertoire sequencing: different patterns of B-cell activation after two Meningococcal vaccines

scientific article

Bayesian coestimation of phylogeny and sequence alignment

scientific article

Benchmarking small-variant genotyping in polyploids

scientific article published on 29 December 2021

CSN and CAVA: variant annotation tools for rapid, robust next-generation sequencing analysis in the clinical setting

scientific article published on 28 July 2015

Comparative and demographic analysis of orang-utan genomes

scientific article

Demographic inference from multiple whole genomes using a particle filter for continuous Markov jump processes

scientific article published on 02 March 2021

Dindel: accurate indel calls from short-read data

scientific article

Dog as an outgroup to human and mouse

scientific article published on April 2007

Efficient inference in state-space models through adaptive learning in online Monte Carlo expectation maximization

scientific article published on 03 December 2019

Erratum to: B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.

scientific article published on 3 August 2016

Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model ⬇️

scientific article published on March 3, 2011

Evolution of primate gene expression: drift and corrective sweeps?

scientific article published on 14 September 2008

Evolutionary biology: human brain gene wins genome race

scientific article published on 16 August 2006

Factors influencing success of clinical genome sequencing across a broad spectrum of disorders

scientific article

Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

scientific article

GAT: a simulation framework for testing the association of genomic intervals

scientific article published on 18 June 2013

Genome assembly quality: assessment and improvement using the neutral indel model

scientific article

Genome-wide functional element detection using pairwise statistical alignment outperforms multiple genome footprinting techniques

scientific article

Genome-wide identification of human functional DNA using a neutral indel model

scientific article

Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain

scientific article

HMMoC--a compiler for hidden Markov models

scientific article published on 10 July 2007

Haplotype matching in large cohorts using the Li and Stephens model.

scientific article published in March 2019

Identification of antigen-specific B cell receptor sequences using public repertoire analysis

scientific article

Improved workflows for high throughput library preparation using the transposome-based Nextera system

scientific article

In-Depth Assessment of Within-Individual and Inter-Individual Variation in the B Cell Receptor Repertoire

scientific article

Insights into hominid evolution from the gorilla genome sequence

scientific article

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

scientific article published on 13 July 2014

Investigating selection on viruses: a statistical alignment approach

scientific article

Massive turnover of functional sequence in human and other mammalian genomes

scientific article (publication date: October 2010)

New Proofs and a Generalization of Inequalities of Fan, Taussky, and Todd

Novel type IV secretion system involved in propagation of genomic islands

scientific article published on 22 November 2006

OpEx - a validated, automated pipeline optimised for clinical exome sequence analysis.

scientific article published on 3 August 2016

Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes

scientific article published in July 2007

Recessive mutations in SPTBN2 implicate β-III spectrin in both cognitive and motor development

scientific article (publication date: 2012)

Sequencing of human genomes with nanopore technology

scientific article published on 23 April 2019

Signatures of adaptive evolution within human non-coding sequence

scientific article published on October 2006

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

scientific article

The Diversity and Molecular Evolution of B-Cell Receptors during Infection

scientific article

The bonobo genome compared with the chimpanzee and human genomes

scientific article

The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines

scientific article

The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes

scientific article published on 11 March 2013

Uncertainty in homology inferences: assessing and improving genomic sequence alignment

scientific article published on 11 December 2007

Unlocking the bottleneck in forward genetics using whole-genome sequencing and identity by descent to isolate causative mutations

scientific article

scrm: efficiently simulating long sequences using the approximated coalescent with recombination

scientific article published on 8 January 2015

Paulina is supported by:

About Paulina

Help