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Authors whose works are in public domain in at least one jurisdiction

List of works by Nils Blüthgen

1-50 of 70 results

Spatial partitioning of the regulatory landscape of the X-inactivation centre

scientific article (publication date: 11 April 2012)

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

scientific article

Measuring specialization in species interaction networks

scientific article

Specialization, constraints, and conflicting interests in mutualistic networks

scientific article published in February 2007

Gene expression. MicroRNA control of protein expression noise

scientific article

Efficient translation initiation dictates codon usage at gene start

scientific article published on 18 June 2013

Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability

scientific article

Strong negative feedback from Erk to Raf confers robustness to MAPK signalling.

scientific article published on May 2011

RORγt⁺ innate lymphoid cells acquire a proinflammatory program upon engagement of the activating receptor NKp44.

scientific article published on 20 June 2013

Effects of sequestration on signal transduction cascades

scientific article published in March 2006

Network quantification of EGFR signaling unveils potential for targeted combination therapy.

scientific article published on January 2013

Recurrent design patterns in the feedback regulation of the mammalian signalling network

scientific article published on 6 May 2008

The two active X chromosomes in female ESCs block exit from the pluripotent state by modulating the ESC signaling network

scientific article

Identification of Y-box binding protein 1 as a core regulator of MEK/ERK pathway-dependent gene signatures in colorectal cancer cells

scientific article

How robust are switches in intracellular signaling cascades?

scientific article published in December 2003

RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-κB pathway

scientific article published on 14 July 2015

Competing docking interactions can bring about bistability in the MAPK cascade

scientific article published on 25 May 2007

Perturbation-response genes reveal signaling footprints in cancer gene expression

scientific article published on 2 January 2018

A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors

scientific article

A systems biological approach suggests that transcriptional feedback regulation by dual-specificity phosphatase 6 shapes extracellular signal-related kinase activity in RAS-transformed fibroblasts

scientific article published on 12 January 2009

Noise management by molecular networks

scientific article

Discovering causal signaling pathways through gene-expression patterns

scientific article

Inferring combinatorial regulation of transcription in silico

scientific article

Reverse engineering a hierarchical regulatory network downstream of oncogenic KRAS.

scientific article

TransFind--predicting transcriptional regulators for gene sets

scientific article

Quantitative analysis of ultrasensitive responses

scientific article published on August 2005

Genome-wide profiling of the activity-dependent hippocampal transcriptome

scientific article

Hypoxia-induced gene expression results from selective mRNA partitioning to the endoplasmic reticulum.

scientific article

Systems biologists seek fuller integration of systems biology approaches in new cancer research programs

scientific article

Transcriptional profiling of Saccharomyces cerevisiae cells under adhesion-inducing conditions

scientific article

Ultrasensitization: switch-like regulation of cellular signaling by transcriptional induction

scientific article

Targetfinder.org: a resource for systematic discovery of transcription factor target genes

scientific article published on 11 May 2010

Tracking in vivo dynamics of NK cells transferred in patients undergoing stem cell transplantation

scientific article published on 30 June 2014

Grouping of histone deacetylase inhibitors and other toxicants disturbing neural crest migration by transcriptional profiling

scientific article published on 31 July 2015

Global analysis of host tissue gene expression in the invasive front of colorectal liver metastases

scientific article published on January 2006

Analysis of impedance-based cellular growth assays

scientific article published on 21 April 2015

Robustness of signal transduction pathways

scientific article published on September 25, 2012

Transcriptional feedbacks in mammalian signal transduction pathways facilitate rapid and reliable protein induction

scientific article published on 7 May 2010

Dissecting the action of an evolutionary conserved non-coding region on renin promoter activity

scientific article

Cell type-dependent differential activation of ERK by oncogenic KRAS in colon cancer and intestinal epithelium

scientific article published on 02 July 2019

Effects of RAF inhibitors on PI3K/AKT signalling depend on mutational status of the RAS/RAF signalling axis

scientific article

SysBioMed report: advancing systems biology for medical applications.

scientific article published on May 2009

Stem Cell-Derived Immature Human Dorsal Root Ganglia Neurons to Identify Peripheral Neurotoxicants

scientific article published on March 2016

Oncogenic β-catenin and PIK3CA instruct network states and cancer phenotypes in intestinal organoids.

scientific article

Seed-based systematic discovery of specific transcription factor target genes.

scientific article

Annexin A1 sustains tumor metabolism and cellular proliferation upon stable loss of HIF1A.

scientific article published on 29 December 2015

Signal integration by the CYP1A1 promoter--a quantitative study

scientific article published on May 2015

Multilevel regulation of HIF-1 signaling by TTP.

scientific article published on 23 August 2012

Computer-assisted curation of a human regulatory core network from the biological literature

scientific article published on 29 November 2014

Natural Cubic Spline Regression Modeling Followed by Dynamic Network Reconstruction for the Identification of Radiation-Sensitivity Gene Association Networks from Time-Course Transcriptome Data

scientific article