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List of works by Carmela Gissi

ANISEED 2015: a digital framework for the comparative developmental biology of ascidians

scientific article (publication date: 4 January 2016)

An integrative taxonomic framework for the study of the genus Ciona (Ascidiacea) and description of a new species, Ciona intermedia ⬇️

scientific article published in 2020

An unprecedented taxonomic revision of a model organism: the paradigmatic case of Ciona robusta and Ciona intestinalis

scientific article published in 2017

Analysis of oligonucleotide AUG start codon context in eukariotic mRNAs.

scientific article published on December 2000

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

scientific article (publication date: 5 December 2002)

Ascidian Mitogenomics: Comparison of Evolutionary Rates in Closely Related Taxa Provides Evidence of Ongoing Speciation Events

scientific article published on 21 April 2014

Ascidian mitogenomics: comparison of evolutionary rates in closely related taxa provides evidence of ongoing speciation events

scientific article published on March 2014

Assessment of orthologous splicing isoforms in human and mouse orthologous genes

scientific article

Back to solitude: Solving the phylogenetic position of the Diazonidae using molecular and developmental characters

scientific article

Bioinformatics in Italy: BITS 2012, the ninth annual meeting of the Italian Society of Bioinformatics

scientific article

Comparative genomics suggests limited variability and similar evolutionary patterns between major clades of SARS-CoV-2

scientific article published on 02 April 2020

Complete mtDNA of Ciona intestinalis reveals extensive gene rearrangement and the presence of an atp8 and an extra trnM gene in ascidians

scientific article

Congruent Mammalian Trees from Mitochondrial and Nuclear Genes Using Bayesian Methods

article

Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes

scientific article (publication date: 2013)

Evolution of the mitochondrial genetic system: an overview

scientific article

Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species

scientific article published on 09 July 2008

Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system

scientific article

Expression and phylogenetic analyses of the Gel/Gas proteins of Tuber melanosporum provide insights into the function and evolution of glucan remodeling enzymes in fungi

scientific article

Extensive mitochondrial gene rearrangements in Ctenophora: insights from benthic Platyctenida.

scientific article published on 27 April 2018

Fixation, description and DNA barcode of a neotype for <i>Botryllus schlosseri </i>(Pallas, 1766) (Tunicata, Ascidiacea).

scientific article published on 22 November 2017

Functional annotation of a full-length mouse cDNA collection

scientific article (publication date: 8 February 2001)

GeneSyn: a tool for detecting conserved gene order across genomes

scientific article published on 19 February 2004

Hitch-hikers of the sea: concurrent morphological and molecular identification of Symplegma brakenhielmi (Tunicata: Ascidiacea) in the western Mediterranean Sea

scientific article published on 01 March 2019

Huntingtin gene evolution in Chordata and its peculiar features in the ascidian Ciona genus

scientific article published on 8 November 2006

Hypervariability of Ascidian Mitochondrial Gene Order: Exposing the Myth of Deuterostome Organelle Genome Stability

article

LC-HRMS-Database Screening Metrics for Rapid Prioritization of Samples to Accelerate the Discovery of Structurally New Natural Products

scientific article published on 08 February 2019

MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa

scientific article

MitoZoa: A curated mitochondrial genome database of metazoans for comparative genomics studies

scholarly article by Renato Lupi et al published March 2010 in Mitochondrion

Mitochondrial DNA in metazoa: degree of freedom in a frozen event

scientific article

Mitochondrial DNA sequence variations in some Italian wild boar populations.

scientific article published in April 2009

Mitochondrial phylogeny of Anura (Amphibia): a case study of congruent phylogenetic reconstruction using amino acid and nucleotide characters

scientific article

Mitogenomics reveals two cryptic species in Ciona intestinalis

scientific article

Molecular classification of living organisms

scientific article published on 01 March 1995

Morphological Differences between Larvae of the Ciona intestinalis Species Complex: Hints for a Valid Taxonomic Definition of Distinct Species

scientific article

Morphological evidence that the molecularly determinedCiona intestinalistype A and type B are different species:Ciona robustaandCiona intestinalis

article

Phylogenetic analyses of complete mitochondrial genome sequences suggest a basal divergence of the enigmatic rodent Anomalurus

scientific article published in 2007

Phylogenetic comparison of huntingtin homologues reveals the appearance of a primitive polyQ in sea urchin

scientific article published on 28 November 2007

Polyclinum constellatum (Tunicata, Ascidiacea), an emerging non-indigenous species of the Mediterranean Sea: integrated taxonomy and the importance of reliable DNA barcode data

scientific article published on 27 January 2022

Spread of the non-indigenous ascidian Aplidium accarense (Millar, 1953) in the Eastern Mediterranean Sea: morphological and molecular tools for an accurate identification

scientific article published on 01 April 2021

Structural and functional features of eukaryotic mRNA untranslated regions

scientific article

The Gas family of proteins of Saccharomyces cerevisiae: characterization and evolutionary analysis

scientific article

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

scientific article

The complete mitochondrial DNA sequence of the rabbit, Oryctolagus cuniculus

scientific article published in June 1998

The genome sequence of the colonial chordate, Botryllus schlosseri

scientific article published in 2013

The influence of invasive jellyfish blooms on the aquatic microbiome in a coastal lagoon (Varano, SE Italy) detected by an Illumina-based deep sequencing strategy

article

The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): high genome plasticity at intra-genus level

scientific article (publication date: 31 August 2007)

The power of combined molecular and morphological analyses for the genus Botrylloides: identification of a potentially global invasive ascidian and description of a new species

scientific article published on 4 July 2019

Tick-box for 3'-end formation of mitochondrial transcripts in Ixodida, basal chelicerates and Drosophila

scientific article (publication date: 2012)

Tissue-specific mtDNA abundance from exome data and its correlation with mitochondrial transcription, mass and respiratory activity

scientific article

Toward a resolution of the cosmopolitan Botryllus schlosseri species complex (Ascidiacea, Styelidae): mitogenomics and morphology of clade E (Botryllus gaiae) ⬇️

scientific article published in 2020

Transcript mapping and genome annotation of ascidian mtDNA using EST data

scientific article

Untranslated regions of mRNAs

scientific article

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