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List of works by Tobias Doerks

A 15q24 microdeletion in transient myeloproliferative disease (TMD) and acute megakaryoblastic leukaemia (AMKL) implicates PML and SUMO3 in the leukaemogenesis of TMD/AMKL

A computational screen for type I polyketide synthases in metagenomics shotgun data

scientific article

A nitrile hydratase in the eukaryote Monosiga brevicollis

scientific article published in 2008

A phylogeny-based benchmarking test for orthology inference reveals the limitations of function-based validation

scientific article

Annotation of the M. tuberculosis hypothetical orfeome: adding functional information to more than half of the uncharacterized proteins

scientific article

BSD: a novel domain in transcription factors and synapse-associated proteins

scientific article

CASH--a beta-helix domain widespread among carbohydrate-binding proteins

scientific article published in February 2002

Computational characterization of multiple Gag-like human proteins

scientific article published on 18 September 2006

DCD - a novel plant specific domain in proteins involved in development and programmed cell death

scientific article

Discovering functional novelty in metagenomes: examples from light-mediated processes

scientific article published on 10 October 2008

Do human lipoxygenases have a PDZ regulatory domain?

scientific article published on December 2008

Experimental characterization of the human non-sequence-specific nucleic acid interactome

scientific article

Functional clues for hypothetical proteins based on genomic context analysis in prokaryotes

scientific article published on December 2004

Global analysis of bacterial transcription factors to predict cellular target processes

scientific article published on March 2004

Identifying single copy orthologs in Metazoa

scientific article published on December 2011

Initial sequencing and analysis of the human genome

scientific article published on 15 February 2001

Lipid Cooperativity as a General Membrane-Recruitment Principle for PH Domains

scientific article published on 19 August 2015

Orthology prediction methods: a quality assessment using curated protein families

scientific article

Prokaryotic ancestry and gene fusion of a dual localized peroxiredoxin in malaria parasites

scientific article (publication date: 5 January 2015)

Protein domain analysis in the era of complete genomes

scientific article

SMART 6: recent updates and new developments

scientific article

SMART 7: recent updates to the protein domain annotation resource

scientific article

SMART: recent updates, new developments and status in 2015.

scientific article published on 9 October 2014

STRING 7--recent developments in the integration and prediction of protein interactions

scientific article

STRING 8--a global view on proteins and their functional interactions in 630 organisms

scientific article

Systematic association of genes to phenotypes by genome and literature mining

scientific article

Systematic identification of novel protein domain families associated with nuclear functions

scientific article

Target-specific requirements for enhancers of decapping in miRNA-mediated gene silencing

scientific article

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

scientific article

Toward Automatic Reconstruction of a Highly Resolved Tree of Life

scientific article

Universally distributed single-copy genes indicate a constant rate of horizontal transfer

scientific article

eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges

scientific article

eggNOG: automated construction and annotation of orthologous groups of genes

scientific article (publication date: 23 December 2007)

mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes

scientific article

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