List of works - Sebastian Maurer-Stroh

A Novel FRET Approach Quantifies the Interaction Strength of Peroxisomal Targeting Signals and Their Receptor in Living Cells

scientific article published on 30 October 2020

A large common-source outbreak of norovirus gastroenteritis in a hotel in Singapore, 2012.

scientific article

A novel method for the capture-based purification of whole viral native RNA genomes

scientific article published on 08 April 2019

ANNIE: integrated de novo protein sequence annotation

scientific article published on 23 April 2009

Addition of glycosylation to influenza A virus hemagglutinin modulates antibody-mediated recognition of H1N1 2009 pandemic viruses

scientific article

All that glitters is not gold--founder effects complicate associations of flu mutations to disease severity

scientific article

AllerCatPro 2.0: a web server for predicting protein allergenicity potential

scientific article published on 11 May 2022

AllerCatPro-prediction of protein allergenicity potential from the protein sequence

scientific article published on 01 September 2019

Antigenic drift of the pandemic 2009 A(H1N1) influenza virus in A ferret model

scientific article

Benchmarking selected computational gene network growing tools in context of virus-host interactions

scientific article

Beware of moving targets: reference proteome content fluctuates substantially over the years

scientific article published on 7 August 2012

Bioinformatics-aided identification, characterization and applications of mushroom linalool synthases

scientific article published on 17 February 2021

Bivalent binding of a fully human IgG to the SARS-CoV-2 spike proteins reveals mechanisms of potent neutralization

scientific article published on 15 July 2020

Conservation of the extended substrate specificity profiles among homologous granzymes across species

scientific article published on 20 June 2013

Cross-reactive dengue human monoclonal antibody prevents severe pathologies and death from Zika virus infections

scientific article published on 20 April 2017

Crystal structure of the p14/MP1 scaffolding complex: how a twin couple attaches mitogen-activated protein kinase signaling to late endosomes

scientific article

Discovering novel SNPs that are correlated with patient outcome in a Singaporean cancer patient cohort treated with gemcitabine-based chemotherapy.

scientific article

Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2

scientific article published on 21 July 2020

Discovery of Influenza A Virus Sequence Pairs and Their Combinations for Simultaneous Heterosubtypic Targeting that Hedge against Antiviral Resistance

scientific article (publication date: 2016)

Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris spelaea)

scientific article published on 12 March 2019

Dynamic Convergent Evolution Drives the Passage Adaptation across 48 Years' History of H3N2 Influenza Evolution

scientific article published on 7 September 2016

Emergence of oseltamivir-resistant pandemic (H1N1) 2009 virus within 48 hours

scientific article

Enzymes and auxiliary factors for GPI lipid anchor biosynthesis and post-translational transfer to proteins

scientific article (publication date: April 2003)

Estimating the fitness advantage conferred by permissive neuraminidase mutations in recent oseltamivir-resistant A(H1N1)pdm09 influenza viruses

scientific article (publication date: April 2014)

Evolutionary trajectories and diagnostic challenges of potentially zoonotic avian influenza viruses H5N1 and H9N2 co-circulating in Egypt.

scientific article

Exome Sequencing and Rare Variant Analysis Reveals Multiple Filaggrin Mutations in Bangladeshi Families with Atopic Eczema and Additional Risk Genes

scientific article published on 30 May 2018

F-BAR domain proteins: Families and function

scientific article

Flavivirus Cross-Reactivity to Dengue Nonstructural Protein 1 Antigen Detection Assays

scientific article published on 24 December 2019

Functional Classification of Super-Large Families of Enzymes Based on Substrate Binding Pocket Residues for Biocatalysis and Enzyme Engineering Applications

scientific article published on 02 August 2021

Genome-Wide Analysis of Protein-Coding Variants in Leprosy

scientific article published on 22 August 2017

Global update on the susceptibility of human influenza viruses to neuraminidase inhibitors, 2014-2015.

scientific article published on 02 June 2016

HIV-1 adaptation to low levels of CCR5 results in V3 and V2 loop changes that increase envelope pathogenicity, CCR5 affinity and decrease susceptibility to Maraviroc

scientific article published on 24 March 2016

HIV-1 subtype CRF01_AE and B differ in utilization of low levels of CCR5, Maraviroc susceptibility and potential N-glycosylation sites

scientific article published on 8 October 2017

HPMV: human protein mutation viewer - relating sequence mutations to protein sequence architecture and function changes

scientific article published on 27 October 2015

How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health

scientific article

Importance of extended protease substrate recognition motifs in steering BNIP-2 cleavage by human and mouse granzymes B.

scientific article

Improving pandemic influenza risk assessment

scientific article

Individual immune selection pressure has limited impact on seasonal influenza virus evolution

scientific article published on 03 December 2018

Inferring putative transmission clusters with Phydelity:

article

Influenza Vaccine-Induced Antibody Responses Are Not Impaired by Frailty in the Community-Dwelling Elderly With Natural Influenza Exposure

article

Integrated Multimodal Evaluation of Genotoxicity in ZFN-Modified Primary Human Cells

scientific article published on 01 January 2018

Integrated tools for biomolecular sequence-based function prediction as exemplified by the ANNOTATOR software environment

scientific article published in January 2010

Inter-Species Host Gene Expression Differences in Response to Human and Avian Influenza A Virus Strains

scientific article published in November 2017

Intra-epidemic evolutionary dynamics of a Dengue virus type 1 population reveal mutant spectra that correlate with disease transmission

scientific article

Investigation of causes of oseltamivir chemoprophylaxis failures during influenza A (H1N1-2009) outbreaks

scientific article

Is LGI2 the candidate gene for partial epilepsy with pericentral spikes?

scientific article

Large-Scale microRNA Expression Profiling Identifies Putative Retinal miRNA-mRNA Signaling Pathways Underlying Form-Deprivation Myopia in Mice

scientific article

MYRbase: analysis of genome-wide glycine myristoylation enlarges the functional spectrum of eukaryotic myristoylated proteins

scientific article

Molecular and biochemical characterization of the NS1 protein of non-cultured influenza B virus strains circulating in Singapore

scientific article published on 25 August 2016

Molecular features of influenza A (H1N1)pdm09 prevalent in Mexico during winter seasons 2012-2014.

scientific article

Motif discovery with data mining in 3D protein structure databases: discovery, validation and prediction of the U-shape zinc binding ("Huf-Zinc") motif

scientific article

Motif refinement of the peroxisomal targeting signal 1 and evaluation of taxon-specific differences

scientific article published in May 2003

Multidimensional Genome-wide Analyses Show Accurate FVIII Integration by ZFN in Primary Human Cells

scientific article published on 22 December 2015

Mutations I117V and I117M and oseltamivir sensitivity of pandemic (H1N1) 2009 viruses

scientific article

Mutations in SCO2 are associated with autosomal-dominant high-grade myopia

scientific article

N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence

scientific article

N-terminal N-myristoylation of proteins: refinement of the sequence motif and its taxon-specific differences

scientific article published in April 2002

Novel SNP improves differential survivability and mortality in non-small cell lung cancer patients

scientific article

On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation

scientific article

Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)

scholarly article published 23 October 2018

Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)

scientific article published in July 2019

Playing hide and seek: how glycosylation of the influenza virus hemagglutinin can modulate the immune response to infection.

scientific article

Prediction of Cancer-Associated Hotspot Mutations that Affect GPCR Oligomerization

Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-Pi, NMT and PTS1

scientific article

Prediction of peroxisomal targeting signal 1 containing proteins from amino acid sequence

scientific article

Prediction of sequence signals for lipid post-translational modifications: insights from case studies

scientific article

Prenylation of viral proteins by enzymes of the host: Virus-driven rationale for therapy with statins and FT/GGT1 inhibitors

scientific article published on 8 September 2017

Protein prenyltransferases

scientific article

Protein sequences encode safeguards against aggregation.

scientific article

Proteomic and Bioinformatic Analyses for the Identification of Proteins With Low Allergenic Potential for Hazard Assessment

scientific article published on 01 July 2019

RNAase-III enzyme Dicer maintains signaling pathways for differentiation and survival in mouse cortical neural stem cells

scientific article

Rare Human Missense Variants can affect the Function of Disease-Relevant Proteins by Loss and Gain of Peroxisomal Targeting Motifs

scientific article published on 17 September 2019

Refinement and prediction of protein prenylation motifs

scientific article

Safety and immunogenicity of a virus-like particle pandemic influenza A (H1N1) 2009 vaccine: results from a double-blinded, randomized Phase I clinical trial in healthy Asian volunteers.

scientific article

Similarity of molecular phenotype between known epilepsy gene LGI1 and disease candidate gene LGI2.

scientific article

Single-residue posttranslational modification sites at the N-terminus, C-terminus or in-between: To be or not to be exposed for enzyme access

scientific article published on July 2015

South-east Asian Zika virus strain linked to cluster of cases in Singapore, August 2016

scientific article (publication date: 22 September 2016)

Sterol regulatory element binding protein 1 couples mechanical cues and lipid metabolism

scientific article published on 22 March 2019

Structural insight into the glycosylphosphatidylinositol transamidase subunits PIG-K and PIG-S from yeast.

scientific article published on 4 December 2010

Supervised Segmentation of Un-Annotated Retinal Fundus Images by Synthesis

scientific article published on 24 July 2018

Synthesizing non-natural parts from natural genomic template

scientific article

Synthesizing retinal and neuronal images with generative adversarial nets

scientific article published on 4 July 2018

Systematic analysis of protein identity between Zika virus and other arthropod-borne viruses

scientific article

Systems-based approach to examine the cytokine responses in primary mouse lung macrophages infected with low pathogenic avian Influenza virus circulating in South East Asia

scientific article

TPR subunits of the anaphase-promoting complex mediate binding to the activator protein CDH1

scientific article (publication date: 2 September 2003)

The Geographic Variation of Surveillance and Zoonotic Spillover Potential of Influenza Viruses in Domestic Poultry and Swine

scientific article published on 27 November 2018

The WD40 propeller domain of Cdh1 functions as a destruction box receptor for APC/C substrates

scientific article

Transmembrane helix: simple or complex

scientific article

Understanding Dengue Virus Capsid Protein Interaction with Key Biological Targets

scientific article published on 10 July 2015

Utilising animal models to evaluate oseltamivir efficacy against influenza A and B viruses with reduced in vitro susceptibility

scientific article published on 18 June 2020

Whole exome sequencing identifies a mutation for a novel form of corneal intraepithelial dyskeratosis

scientific article

ZO-1 regulates Erk, Smad1/5/8, Smad2, and RhoA activities to modulate self-renewal and differentiation of mouse embryonic stem cells

scientific article

List of works by Sebastian Maurer-Stroh

A Novel FRET Approach Quantifies the Interaction Strength of Peroxisomal Targeting Signals and Their Receptor in Living Cells

A large common-source outbreak of norovirus gastroenteritis in a hotel in Singapore, 2012.

A novel method for the capture-based purification of whole viral native RNA genomes

ANNIE: integrated de novo protein sequence annotation

Addition of glycosylation to influenza A virus hemagglutinin modulates antibody-mediated recognition of H1N1 2009 pandemic viruses

All that glitters is not gold--founder effects complicate associations of flu mutations to disease severity

AllerCatPro 2.0: a web server for predicting protein allergenicity potential

AllerCatPro-prediction of protein allergenicity potential from the protein sequence

Antigenic drift of the pandemic 2009 A(H1N1) influenza virus in A ferret model

Benchmarking selected computational gene network growing tools in context of virus-host interactions

Beware of moving targets: reference proteome content fluctuates substantially over the years

Bioinformatics-aided identification, characterization and applications of mushroom linalool synthases

Bivalent binding of a fully human IgG to the SARS-CoV-2 spike proteins reveals mechanisms of potent neutralization

Conservation of the extended substrate specificity profiles among homologous granzymes across species

Cross-reactive dengue human monoclonal antibody prevents severe pathologies and death from Zika virus infections

Crystal structure of the p14/MP1 scaffolding complex: how a twin couple attaches mitogen-activated protein kinase signaling to late endosomes

Discovering novel SNPs that are correlated with patient outcome in a Singaporean cancer patient cohort treated with gemcitabine-based chemotherapy.

Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2

Discovery of Influenza A Virus Sequence Pairs and Their Combinations for Simultaneous Heterosubtypic Targeting that Hedge against Antiviral Resistance

Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris spelaea)

Dynamic Convergent Evolution Drives the Passage Adaptation across 48 Years' History of H3N2 Influenza Evolution

Emergence of oseltamivir-resistant pandemic (H1N1) 2009 virus within 48 hours

Enzymes and auxiliary factors for GPI lipid anchor biosynthesis and post-translational transfer to proteins

Estimating the fitness advantage conferred by permissive neuraminidase mutations in recent oseltamivir-resistant A(H1N1)pdm09 influenza viruses

Evolutionary trajectories and diagnostic challenges of potentially zoonotic avian influenza viruses H5N1 and H9N2 co-circulating in Egypt.

Exome Sequencing and Rare Variant Analysis Reveals Multiple Filaggrin Mutations in Bangladeshi Families with Atopic Eczema and Additional Risk Genes

F-BAR domain proteins: Families and function

Flavivirus Cross-Reactivity to Dengue Nonstructural Protein 1 Antigen Detection Assays

Functional Classification of Super-Large Families of Enzymes Based on Substrate Binding Pocket Residues for Biocatalysis and Enzyme Engineering Applications

Genome-Wide Analysis of Protein-Coding Variants in Leprosy

Global update on the susceptibility of human influenza viruses to neuraminidase inhibitors, 2014-2015.

HIV-1 adaptation to low levels of CCR5 results in V3 and V2 loop changes that increase envelope pathogenicity, CCR5 affinity and decrease susceptibility to Maraviroc

HIV-1 subtype CRF01_AE and B differ in utilization of low levels of CCR5, Maraviroc susceptibility and potential N-glycosylation sites

HPMV: human protein mutation viewer - relating sequence mutations to protein sequence architecture and function changes

How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health

Importance of extended protease substrate recognition motifs in steering BNIP-2 cleavage by human and mouse granzymes B.

Improving pandemic influenza risk assessment

Individual immune selection pressure has limited impact on seasonal influenza virus evolution

Inferring putative transmission clusters with Phydelity:

Influenza Vaccine-Induced Antibody Responses Are Not Impaired by Frailty in the Community-Dwelling Elderly With Natural Influenza Exposure

Integrated Multimodal Evaluation of Genotoxicity in ZFN-Modified Primary Human Cells

Integrated tools for biomolecular sequence-based function prediction as exemplified by the ANNOTATOR software environment

Inter-Species Host Gene Expression Differences in Response to Human and Avian Influenza A Virus Strains

Intra-epidemic evolutionary dynamics of a Dengue virus type 1 population reveal mutant spectra that correlate with disease transmission

Investigation of causes of oseltamivir chemoprophylaxis failures during influenza A (H1N1-2009) outbreaks

Is LGI2 the candidate gene for partial epilepsy with pericentral spikes?

Large-Scale microRNA Expression Profiling Identifies Putative Retinal miRNA-mRNA Signaling Pathways Underlying Form-Deprivation Myopia in Mice

MYRbase: analysis of genome-wide glycine myristoylation enlarges the functional spectrum of eukaryotic myristoylated proteins

Molecular and biochemical characterization of the NS1 protein of non-cultured influenza B virus strains circulating in Singapore

Molecular features of influenza A (H1N1)pdm09 prevalent in Mexico during winter seasons 2012-2014.

Motif discovery with data mining in 3D protein structure databases: discovery, validation and prediction of the U-shape zinc binding ("Huf-Zinc") motif

Motif refinement of the peroxisomal targeting signal 1 and evaluation of taxon-specific differences

Multidimensional Genome-wide Analyses Show Accurate FVIII Integration by ZFN in Primary Human Cells

Mutations I117V and I117M and oseltamivir sensitivity of pandemic (H1N1) 2009 viruses

Mutations in SCO2 are associated with autosomal-dominant high-grade myopia

N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence

N-terminal N-myristoylation of proteins: refinement of the sequence motif and its taxon-specific differences

Novel SNP improves differential survivability and mortality in non-small cell lung cancer patients

On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation

Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)

Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)

Playing hide and seek: how glycosylation of the influenza virus hemagglutinin can modulate the immune response to infection.

Prediction of Cancer-Associated Hotspot Mutations that Affect GPCR Oligomerization

Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-Pi, NMT and PTS1

Prediction of peroxisomal targeting signal 1 containing proteins from amino acid sequence

Prediction of sequence signals for lipid post-translational modifications: insights from case studies

Prenylation of viral proteins by enzymes of the host: Virus-driven rationale for therapy with statins and FT/GGT1 inhibitors

Protein prenyltransferases

Protein sequences encode safeguards against aggregation.

Proteomic and Bioinformatic Analyses for the Identification of Proteins With Low Allergenic Potential for Hazard Assessment

RNAase-III enzyme Dicer maintains signaling pathways for differentiation and survival in mouse cortical neural stem cells

Rare Human Missense Variants can affect the Function of Disease-Relevant Proteins by Loss and Gain of Peroxisomal Targeting Motifs

Refinement and prediction of protein prenylation motifs

Safety and immunogenicity of a virus-like particle pandemic influenza A (H1N1) 2009 vaccine: results from a double-blinded, randomized Phase I clinical trial in healthy Asian volunteers.

Similarity of molecular phenotype between known epilepsy gene LGI1 and disease candidate gene LGI2.

Single-residue posttranslational modification sites at the N-terminus, C-terminus or in-between: To be or not to be exposed for enzyme access

South-east Asian Zika virus strain linked to cluster of cases in Singapore, August 2016

Sterol regulatory element binding protein 1 couples mechanical cues and lipid metabolism

Structural insight into the glycosylphosphatidylinositol transamidase subunits PIG-K and PIG-S from yeast.