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List of works by Emmanuel Gaquerel

An integrative statistical method to explore herbivory-specific responses in plants

scientific article published on October 2013

Annotation of Specialized Metabolites from High-Throughput and High-Resolution Mass Spectrometry Metabolomics

scientific article published on 01 January 2020

Beyond the Canon: Within-Plant and Population-Level Heterogeneity in Jasmonate Signaling Engaged by Plant-Insect Interactions

scientific article

Challenges in the Investigation of the Metabolic Changes in Nicotiana Attenuata during Insect Herbivory Using an Improved HPLC-TOF-MS Method

scientific article published in September 2010

Computational annotation of plant metabolomics profiles via a novel network-assisted approach

article

Current Challenges in Plant Eco-Metabolomics.

scientific article published on 6 May 2018

Deciphering herbivory-induced gene-to-metabolite dynamics in Nicotiana attenuata tissues using a multifactorial approach

scientific article

Development and validation of a liquid chromatography-electrospray ionization-time-of-flight mass spectrometry method for induced changes in Nicotiana attenuata leaves during simulated herbivory

scientific article published on September 2010

Different lepidopteran elicitors account for cross-talk in herbivory-induced phytohormone signaling

scientific article published on 20 May 2009

Diverting the flux of the JA pathway in Nicotiana attenuata compromises the plant's defense metabolism and fitness in nature and glasshouse

scientific article

Early events in the perception of lipopolysaccharides in the brown alga Laminaria digitata include an oxidative burst and activation of fatty acid oxidation cascades

scientific article published on 11 May 2006

Ectopic expression of AtJMT in Nicotiana attenuata: creating a metabolic sink has tissue-specific consequences for the jasmonate metabolic network and silences downstream gene expression

scientific article published on 13 July 2011

Ethylene is a local modulator of jasmonate-dependent phenolamide accumulation during Manduca sexta herbivory in Nicotiana attenuata

scientific article published on 20 November 2020

Evidence for oxylipin synthesis and induction of a new polyunsaturated fatty acid hydroxylase activity in Chondrus crispus in response to methyljasmonate

scientific article published on 2 March 2007

Free Fatty Acids and Methyl Jasmonate Trigger Defense Reactions in Laminaria digitata

scientific article published on 11 February 2009

Honing in on phenotypes: comprehensive two-dimensional gas chromatography of herbivory-induced volatile emissions and novel opportunities for system-level analyses

scientific article

Illuminating a plant's tissue-specific metabolic diversity using computational metabolomics and information theory

scientific article

Improving the accuracy of expression data analysis in time course experiments using resampling

scientific article

Information theory tests critical predictions of plant defense theory for specialized metabolism

scientific article published on 10 June 2020

Insect Resistance: An Emerging Molecular Framework Linking Plant Age and JA Signaling

scientific article published on 3 March 2017

Jasmonate signaling in the field, part I: elicited changes in jasmonate pools of transgenic Nicotiana attenuata populations

scientific article published on January 2013

Jasmonate signaling in the field, part II: insect-guided characterization of genetic variations in jasmonate-dependent defenses of transgenic and natural Nicotiana attenuata populations

scientific article published on January 2013

Jasmonoyl-L-isoleucine coordinates metabolic networks required for anthesis and floral attractant emission in wild tobacco (Nicotiana attenuata).

scientific article published on 17 October 2014

MYB8 controls inducible phenolamide levels by activating three novel hydroxycinnamoyl-coenzyme A:polyamine transferases in Nicotiana attenuata.

scientific article published on 14 November 2011

MetCirc: navigating mass spectral similarity in high-resolution MS/MS metabolomics data

scientific article

Molecular interactions between the specialist herbivore Manduca sexta (Lepidoptera, Sphigidae) and its natural host Nicotiana attenuata. VIII. An unbiased GCxGC-ToFMS analysis of the plant's elicited volatile emissions

scientific article published on 9 January 2009

Molecular mechanisms underlying plant memory in JA-mediated defence responses.

scientific article published on 24 July 2008

NaMYC2 transcription factor regulates a subset of plant defense responses in Nicotiana attenuata

scientific article

Navigating natural variation in herbivory-induced secondary metabolism in coyote tobacco populations using MS/MS structural analysis

scientific article published on 13 July 2015

Next-Generation Mass Spectrometry Metabolomics Revives the Functional Analysis of Plant Metabolic Diversity

scientific article published in 2021

Nicotiana attenuata Data Hub (NaDH): an integrative platform for exploring genomic, transcriptomic and metabolomic data in wild tobacco

scientific article

Nicotiana attenuata α-DIOXYGENASE1 through its production of 2-hydroxylinolenic acid is required for intact plant defense expression against attack from Manduca sexta larvae

scientific article

O-Acyl Sugars Protect a Wild Tobacco from Both Native Fungal Pathogens and a Specialist Herbivore

scientific article

Polymorphism in jasmonate signaling partially accounts for the variety of volatiles produced by Nicotiana attenuata plants in a native population.

scientific article

RNA-directed RNA polymerase3 from Nicotiana attenuata is required for competitive growth in natural environments

scientific article

Revealing insect herbivory-induced phenolamide metabolism: from single genes to metabolic network plasticity analysis

scientific article published on 21 May 2014

Silencing an N-acyltransferase-like involved in lignin biosynthesis in Nicotiana attenuata dramatically alters herbivory-induced phenolamide metabolism

scientific article

Specific decorations of 17-hydroxygeranyllinalool diterpene glycosides solve the autotoxicity problem of chemical defense in Nicotiana attenuata

scientific article published in 2021

Synthesis of Non-natural Aza-Iridoids via Ynamides and Molecular Networking-Based Tracing of Their In Planta Bioconversion

scientific article published in 2022

TOC1 in Nicotiana attenuata regulates efficient allocation of nitrogen to defense metabolites under herbivory stress

scientific article published on 30 June 2020

The Active Jasmonate JA-Ile Regulates a Specific Subset of Plant Jasmonate-Mediated Resistance to Herbivores in Nature.

scientific article

The innate immunity of a marine red alga involves oxylipins from both the eicosanoid and octadecanoid pathways

scientific article published on 9 July 2004

The roots of plant defenses: integrative multivariate analyses uncover dynamic behaviors of gene and metabolic networks of roots elicited by leaf herbivory

scientific article

The two alpha-dox genes of Nicotiana attenuata: overlapping but distinct functions in development and stress responses

scientific article

Tissue specific diurnal rhythms of metabolites and their regulation during herbivore attack in a native tobacco, Nicotiana attenuata

scientific article

Using the knowns to discover the unknowns: MS-based dereplication uncovers structural diversity in 17-hydroxygeranyllinalool diterpene glycoside production in the Solanaceae

scientific article published on 7 January 2016

Wild tobacco genomes reveal the evolution of nicotine biosynthesis

scientific article