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List of works by Jason T. Ladner

A Multicomponent Animal Virus Isolated from Mosquitoes

scientific article

A spontaneous mutation in kdsD, a biosynthesis gene for 3 Deoxy-D-manno-Octulosonic Acid, occurred in a ciprofloxacin resistant strain of Francisella tularensis and caused a high level of attenuation in murine models of tularemia.

scientific article

An attenuated Machupo virus with a disrupted L-segment intergenic region protects guinea pigs against lethal Guanarito virus infection

scientific article

Burkholderia humptydooensis sp. nov., a new species related to Burkholderia thailandensis and the fifth member of the pseudomallei complex

scientific article

Characterization of the Punta Toro species complex (genus Phlebovirus, family Bunyaviridae).

scientific article published in May 2015

Characterization of the Sandfly fever Naples species complex and description of a new Karimabad species complex (genus Phlebovirus, family Bunyaviridae).

scientific article

Characterization of the murine macrophage response to infection with virulent and avirulent Burkholderia species.

scientific article published on 6 November 2015

Complete Coding Genome Sequence for Mogiana Tick Virus, a Jingmenvirus Isolated from Ticks in Brazil

scientific article published on 4 May 2017

Complete Genome Sequence of Pigmentation-Negative Yersinia pestis Strain Cadman

scientific article

Complete Genome Sequences of Five Zika Virus Isolates

scientific article

Complete coding sequences of eastern equine encephalitis virus and venezuelan equine encephalitis virus strains isolated from human cases

scientific article

Complete genome sequences for 35 biothreat assay-relevant bacillus species

scientific article

Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor

scientific article published on 30 April 2015

Correction for Johnson et al., Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor

scientific article published on 21 April 2016

Development of real-time PCR assays for the detection of Moraxella macacae associated with bloody nose syndrome in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques

scientific article published on 14 September 2015

Draft Genome Assembly of Acinetobacter baumannii ATCC 19606

scientific article

Ebola Virus Epidemiology and Evolution in Nigeria

scientific article published on 04 July 2016

Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone

scientific article

Ebola Virus Infections in Nonhuman Primates Are Temporally Influenced by Glycoprotein Poly-U Editing Site Populations in the Exposure Material

scientific article

Emergence of Ebola Virus Escape Variants in Infected Nonhuman Primates Treated with the MB-003 Antibody Cocktail

scientific article published on 9 September 2015

Evolution and Spread of Ebola Virus in Liberia, 2014-2015

scientific article

Extensive sympatry, cryptic diversity and introgression throughout the geographic distribution of two coral species complexes

scientific article

First report of naturally infected Aedes aegypti with chikungunya virus genotype ECSA in the Americas

scientific article

Genome Sequence of Moraxella macacae 0408225, a Novel Bacterial Species Isolated from a Cynomolgus Macaque with Epistaxis

scientific article published on January 2013

Genome Sequence of Weissella ceti NC36, an Emerging Pathogen of Farmed Rainbow Trout in the United States

scientific article published on January 2013

Genome sequencing of 18 francisella strains to aid in assay development and testing

scientific article published on 30 April 2015

Genomic Characterization of the Genus Nairovirus (Family Bunyaviridae)

scientific article (publication date: 10 June 2016)

Genomic and phylogenetic characterization of viruses included in the Manzanilla and Oropouche species complexes of the genus Orthobunyavirus, family Bunyaviridae.

scientific article published on 20 February 2014

Genomic basis for coral resilience to climate change

scientific article

Genomic epidemiology reveals multiple introductions of Zika virus into the United States ⬇️

scientific article

Hidden Diversity In Corals And Their Endosymbionts ⬇️

2012 thesis (Ph.D.) submitted to Stanford University by Jason Ladner

Informing the Historical Record of Experimental Nonhuman Primate Infections with Ebola Virus: Genomic Characterization of USAMRIID Ebola Virus/H.sapiens-tc/COD/1995/Kikwit-9510621 Challenge Stock "R4368" and Its Replacement "R4415".

scientific article

International travelers and genomics uncover a ‘hidden’ Zika outbreak

scientific article published on 14 December 2018

Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence

scientific article

Molecular characterization of plasmid pMoma1of Moraxella macacae, a newly described bacterial pathogen of macaques

scientific article published on 15 November 2014

Molecular evidence of sexual transmission of Ebola virus

journal article published in 2015

Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia

scientific article

Multiple introductions of Zika virus into the United States revealed through genomic epidemiology

scientific article

Pathosphere.org: pathogen detection and characterization through a web-based, open source informatics platform

scientific article published on 29 December 2015

Persistence and Intra-Host Genetic Evolution of Zika Virus Infection in Symptomatic Adults: A Special View in the Male Reproductive System

scientific article published on 07 November 2018

Persistence of Brucella abortus lineages revealed by genomic characterization and phylodynamic analysis

scientific article published on 14 April 2020

Persistence of Ebola virus after the end of widespread transmission in Liberia: an outbreak report

journal article published in 2018

Possible sexual transmission of Ebola virus - Liberia, 2015.

scientific article

Precision epidemiology for infectious disease control

scientific article published on 06 February 2019

Protein evolution in two co-occurring types of Symbiodinium: an exploration into the genetic basis of thermal tolerance in Symbiodinium clade D

scientific article

Reduced evolutionary rate in reemerged Ebola virus transmission chains

journal article published in 2016

Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity

scientific article published on 28 October 2020

Spontaneous Mutation at Amino Acid 544 of the Ebola Virus Glycoprotein Potentiates Virus Entry and Selection in Tissue Culture

scientific article

Standards for sequencing viral genomes in the era of high-throughput sequencing

scientific article published on 17 June 2014

The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers

scientific article

The simple fool's guide to population genomics via RNA-Seq: an introduction to high-throughput sequencing data analysis

scientific article

Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica

scientific article published on 30 April 2015

Tracking virus outbreaks in the twenty-first century

scientific article published on 13 December 2018

Travel Surveillance and Genomics Uncover a Hidden Zika Outbreak during the Waning Epidemic

scholarly article by Nathan D. Grubaugh et al published 22 August 2019 in Cell

Virus genomes reveal factors that spread and sustained the Ebola epidemic

scientific article (publication date: 12 April 2017)

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