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List of works by Markus Ankenbrand

A Deep Learning Based Cardiac Cine Segmentation Framework for Clinicians – Transfer Learning Application to 7T

scientific article published on 17 June 2020

A data‐driven semantic segmentation model for direct cardiac functional analysis based on undersampled radial MR cine series

scientific article published on 5 October 2021

A systematic comparison of chloroplast genome assembly tools

scientific article published on 28 September 2020

A systematic comparison of chloroplast genome assembly tools

scientific article published on 10 June 2019

AliTV-interactive visualization of whole genome comparisons

scientific article published on 21 April 2017

AliTV-interactive visualization of whole genome comparisons

scientific article published on 10 August 2016

AliTV—interactive visualization of whole genome comparisons

scientific article

B0 shimming of the human heart at 7T

scientific article published on 23 July 2020

BCdatabaser: on-the-fly reference database creation for (meta-)barcoding

scientific article published on 06 January 2020

Chronic exposure to the pesticide flupyradifurone can lead to premature onset of foraging in honeybees Apis mellifera

scientific article published on 16 January 2020

Compensatory base changes in ITS2 secondary structures correlate with the biological species concept despite intragenomic variability in ITS2 sequences--a proof of concept

scientific article (publication date: 2013)

DNA-Metabarcoding – ein neuer Blick auf organismische Diversität

Dealing with software complexity in individual‐based models

scientific article published on 18 September 2021

Deep learning‐based cardiac cine segmentation: Transfer learning application to 7T ultrahigh‐field MRI

scientific article published on 18 May 2021

Draft Genome Sequence of Klebsiella sp. Strain C31 Isolated from a Malaysian Tropical Peat Swamp Forest.

scientific article published on 21 June 2018

Draft Genome Sequence of Paraburkholderia sp. Strain C35, Isolated from a Malaysian Tropical Peat Swamp Forest.

scientific article

Efficient Permutation-based Genome-wide Association Studies for Normal and Skewed Phenotypic Distributions

scientific article published on 7 April 2022

Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples

scientific article published on 30 September 2014

Exploring Ensemble Applications for Multi-sequence Myocardial Pathology Segmentation

scientific article published in 2020

FENNEC - Functional Exploration of Natural Networks and Ecological Communities

Functional exploration of natural networks and ecological communities

scientific article published in 2018

Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory

scientific article published on 11 May 2020

ITS2 Database V: Twice as Much

scientific article published on 6 August 2015

In Vitro Rearing Changes Social Task Performance and Physiology in Honeybees

scientific article published on 21 December 2021

Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach

scientific article published on 22 July 2015

Inferring Core Genome Phylogenies for Bacteria

scientific article published in 2021

Linking pollen foraging of megachilid bees to their nest bacterial microbiota

scientific article published on 02 September 2019

Novel Integrative Elements and Genomic Plasticity in Ocean Ecosystems

scientific article published on 08 April 2021

Novel integrative elements and genomic plasticity in ocean ecosystems

scientific article published on 28 December 2020

Novel integrative elements and genomic plasticity in ocean ecosystems

scientific article published in January 2023

On the way to routine cardiac MRI at 7 Tesla - a pilot study on consecutive 84 examinations

scientific article published on 23 July 2021

Publisher Correction: Open Science principles for accelerating trait-based science across the Tree of Life

scientific article published on 01 April 2020

Self-configuring nnU-net pipeline enables fully automatic infarct segmentation in late enhancement MRI after myocardial infarction

scientific article published in August 2021

Sensitivity Analysis for Interpretation of Machine Learning Based Segmentation Models in Cardiac MRI

scientific article published on 29 October 2020

Sensitivity analysis for interpretation of machine learning based segmentation models in cardiac MRI

scientific article

Standard methods for pollen research

scientific article published on 8 August 2021

TBro: visualization and management of de novo transcriptomes

scientific article published on 26 December 2016

Ten (mostly) simple rules to future‐proof trait data in ecological and evolutionary sciences

scientific article published on 22 November 2022

The Open Traits Network: Using Open Science principles to accelerate trait-based science across the Tree of Life

scientific article published on 17 February 2020

Venus flytrap carnivorous lifestyle builds on herbivore defense strategies

scientific article (publication date: 4 May 2016)

Wild bees and their nests host Paenibacillus bacteria with functional potential of avail

scientific article published on 22 December 2018

bcgTree: automatized phylogenetic tree building from bacterial core genomes

scientific article published on 11 May 2016

biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM) format.

scientific article

chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data

scientific article published on 16 January 2018