List of works - Evangelia Petsalaki

A recombinant Fasciola gigantica 14-3-3 epsilon protein (rFg14-3-3e) modulates various functions of goat peripheral blood mononuclear cells.

scientific article

Accurate prediction of peptide binding sites on protein surfaces.

scientific article

Allosteric Modulation of Binding Specificity by Alternative Packing of Protein Cores

scientific article published on 22 November 2018

Application of CRISPR-Cas9 Based Genome-Wide Screening Approaches to Study Cellular Signalling Mechanisms.

scientific article published on 21 March 2018

CEN-tools: an integrative platform to identify the contexts of essential genes

scientific article published on 01 October 2020

Combinatorial proteomic analysis of intercellular signaling applied to the CD28 T-cell costimulatory receptor.

scientific article

Crystallographic studies on N-azidoacetyl-β-d-glucopyranosylamine, an inhibitor of glycogen phosphorylase: Comparison with N-acetyl-β-d-glucopyranosylamine

scientific article published on 17 April 2006

Dynamic regulation of hypoxia-inducible factor-1α activity is essential for normal B cell development

scientific article published on 31 August 2020

Identification of phenotype-specific networks from paired gene expression-cell shape imaging data

scientific article published on 23 February 2022

Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate

scientific journal article

Interactions between the Fyn SH3-domain and adaptor protein Cbp/PAG derived ligands, effects on kinase activity and affinity.

scientific article

Large-scale datasets uncovering cell signalling networks in cancer: context matters

scientific article published on 01 February 2019

PepSite: prediction of peptide-binding sites from protein surfaces

scientific article published on 16 May 2012

Peptide-mediated interactions in biological systems: new discoveries and applications

article

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles

scientific article published on March 2015

Phosphoproteomics identifies a bimodal EPHA2 receptor switch that promotes embryonic stem cell differentiation

scientific article published on 13 March 2020

Pooled-matrix protein interaction screens using Barcode Fusion Genetics

scientific journal article

PredSL: a tool for the N-terminal sequence-based prediction of protein subcellular localization

scientific article published on February 2006

Protein domain-level landscape of cancer-type-specific somatic mutations

scientific article

Proteomics and phosphoproteomics in precision medicine: applications and challenges.

scientific article

SELPHI: correlation-based identification of kinase-associated networks from global phospho-proteomics data sets.

scientific article

Spatial Organization of Rho GTPase signaling by RhoGEF/RhoGAP proteins

scholarly article published 24 June 2018

Src homology 2 domain containing protein 5 (SH2D5) binds the breakpoint cluster region protein, BCR, and regulates levels of Rac1-GTP

scientific journal article

Structural basis and sequence rules for substrate recognition by Tankyrase explain the basis for cherubism disease

scientific article

SuperTarget and Matador: resources for exploring drug-target relationships

scientific article

Suppression of insulin-induced gene 1 (INSIG1) function promotes hepatic lipid remodelling and restrains NASH progression

publication published on 17 March 2021

Systematic identification of phosphorylation-mediated protein interaction switches

scientific article

Systems analysis of RhoGEF and RhoGAP regulatory proteins reveals spatially organized RAC1 signalling from integrin adhesions

scientific article published on 23 March 2020

The Fes tyrosine kinase guides CD19 receptor fate in B-cells by shaping regulatory Src phosphorylation networks

The identification of short linear motif-mediated interfaces within the human interactome

scientific article published on 10 February 2012

Transcription factors: Bridge between cell signaling and gene regulation

scientific article published in 2021

WD40 proteins propel cellular networks.

scientific article

iTRAQ-Based Global Phosphoproteomics Reveals Novel Molecular Differences Between Toxoplasma gondii Strains of Different Genotypes

scientific article published on 23 August 2019

List of works by Evangelia Petsalaki

A recombinant Fasciola gigantica 14-3-3 epsilon protein (rFg14-3-3e) modulates various functions of goat peripheral blood mononuclear cells.

Accurate prediction of peptide binding sites on protein surfaces.

Allosteric Modulation of Binding Specificity by Alternative Packing of Protein Cores

Application of CRISPR-Cas9 Based Genome-Wide Screening Approaches to Study Cellular Signalling Mechanisms.

CEN-tools: an integrative platform to identify the contexts of essential genes

Combinatorial proteomic analysis of intercellular signaling applied to the CD28 T-cell costimulatory receptor.

Crystallographic studies on N-azidoacetyl-β-d-glucopyranosylamine, an inhibitor of glycogen phosphorylase: Comparison with N-acetyl-β-d-glucopyranosylamine

Dynamic regulation of hypoxia-inducible factor-1α activity is essential for normal B cell development

Identification of phenotype-specific networks from paired gene expression-cell shape imaging data

Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate

Interactions between the Fyn SH3-domain and adaptor protein Cbp/PAG derived ligands, effects on kinase activity and affinity.

Large-scale datasets uncovering cell signalling networks in cancer: context matters

PepSite: prediction of peptide-binding sites from protein surfaces

Peptide-mediated interactions in biological systems: new discoveries and applications

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles

Phosphoproteomics identifies a bimodal EPHA2 receptor switch that promotes embryonic stem cell differentiation

Pooled-matrix protein interaction screens using Barcode Fusion Genetics

PredSL: a tool for the N-terminal sequence-based prediction of protein subcellular localization

Protein domain-level landscape of cancer-type-specific somatic mutations

Proteomics and phosphoproteomics in precision medicine: applications and challenges.

SELPHI: correlation-based identification of kinase-associated networks from global phospho-proteomics data sets.

Spatial Organization of Rho GTPase signaling by RhoGEF/RhoGAP proteins

Src homology 2 domain containing protein 5 (SH2D5) binds the breakpoint cluster region protein, BCR, and regulates levels of Rac1-GTP

Structural basis and sequence rules for substrate recognition by Tankyrase explain the basis for cherubism disease

SuperTarget and Matador: resources for exploring drug-target relationships

Suppression of insulin-induced gene 1 (INSIG1) function promotes hepatic lipid remodelling and restrains NASH progression

Systematic identification of phosphorylation-mediated protein interaction switches

Systems analysis of RhoGEF and RhoGAP regulatory proteins reveals spatially organized RAC1 signalling from integrin adhesions

The Fes tyrosine kinase guides CD19 receptor fate in B-cells by shaping regulatory Src phosphorylation networks

The identification of short linear motif-mediated interfaces within the human interactome

Transcription factors: Bridge between cell signaling and gene regulation

WD40 proteins propel cellular networks.

iTRAQ-Based Global Phosphoproteomics Reveals Novel Molecular Differences Between Toxoplasma gondii Strains of Different Genotypes