List of works by Mandy Sanders

A comprehensive evaluation of rodent malaria parasite genomes and gene expression

scientific article

A genome wide association study of Plasmodium falciparum susceptibility to 22 antimalarial drugs in Kenya

scientific article (publication date: 2014)

A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes

scientific article

An improved Plasmodium cynomolgi genome assembly reveals an unexpected methyltransferase gene expansion

scientific article

Analysis of Campylobacter jejuni capsular loci reveals multiple mechanisms for the generation of structural diversity and the ability to form complex heptoses

scientific article published on January 2005

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

scientific article (publication date: 19 July 2012)

Analysis of expressed sequence tags from the four main developmental stages of Trypanosoma congolense

scientific article

Antibody-independent mechanisms regulate the establishment of chronic Plasmodium infection

scientific article published on 6 February 2017

Author Correction: Genomes of all known members of a Plasmodium subgenus reveal paths to virulent human malaria

scientific article published on 14 August 2020

Characterization of a novel wood mouse virus related to murid herpesvirus 4.

scientific article

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

scientific article published on 28 October 2011

Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

scientific article

Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

scientific article

Comparative genomics in Chlamydomonas and Plasmodium identifies an ancient nuclear envelope protein family essential for sexual reproduction in protists, fungi, plants, and vertebrates

scientific article published in May 2013

Comparative genomics of the apicomplexan parasites Toxoplasma gondii and Neospora caninum: Coccidia differing in host range and transmission strategy

scientific article published in 2012

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals.

scientific article published on 2 March 2018

Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance

scientific article

Daily rhythms in gene expression of the human parasite Schistosoma mansoni

scientific article published in 2021

Drug-resistant genotypes and multi-clonality in Plasmodium falciparum analysed by direct genome sequencing from peripheral blood of malaria patients

scientific article published in 2011

Elusive Plasmodium Species Complete the Human Malaria Genome Set

scientific article (publication date: 12 May 2016)

Evaluation of whole genome amplification and bioinformatic methods for the characterization of Leishmania genomes at a single cell level

scientific article published on 14 September 2020

Evolution of the Rhodococcus equi vap pathogenicity island seen through comparison of host-associated vapA and vapB virulence plasmids

scientific article

Genetic diversity of Cryptosporidium hominis in a Bangladeshi community as revealed by whole genome sequencing.

scientific article published on 5 March 2018

Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

scientific article published on 22 May 2007

Genome sequencing of chimpanzee malaria parasites reveals possible pathways of adaptation to human hosts.

scientific article

Genome-wide SNP and microsatellite variation illuminate population-level epidemiology in the Leishmania donovani species complex

scientific article published on 20 November 2011

Genomes of Leishmania parasites directly sequenced from patients with visceral leishmaniasis in the Indian subcontinent

scientific article published on 12 December 2019

Genomic Characterization of Recrudescent Plasmodium malariae after Treatment with Artemether/Lumefantrine

scientific article published on 15 August 2017

Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani

Genomic analysis of the causative agents of coccidiosis in domestic chickens

scientific article

Genomic and transcriptomic comparisons of closely related malaria parasites differing in virulence and sequestration pattern

scholarly article by Jingwen Lin et al published 2018 in Wellcome Open Research

Genomic confirmation of hybridisation and recent inbreeding in a vector-isolated Leishmania population

scientific article

Genomic epidemiology of the current wave of artemisinin resistant malaria

scholarly article by Roberto Amato et al published 22 May 2015 in bioRxiv

Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens

scientific article

Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei

scientific article

Global Gene Expression Profiling through the Complete Life Cycle of Trypanosoma vivax

scientific article

Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology

scientific article published on 18 June 2010

Kinetoplastid Phylogenomics Reveals the Evolutionary Innovations Associated with the Origins of Parasitism

scientific article

Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia

scientific article published on 28 April 2013

Plasmodium malariae and P. ovale genomes provide insights into malaria parasite evolution

scientific article

Pre-clinical evaluation of a -based whole-sporozoite malaria vaccine candidate

scholarly article by António M Mendes et al published 2018 in npj Vaccines

REAPR: a universal tool for genome assembly evaluation

scientific article

Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis

scientific article

Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak

scientific article published on June 2012

Repeated clinical malaria episodes are associated with modification of the immune system in children

scientific article published on 13 March 2019

Salmonella bongori provides insights into the evolution of the Salmonellae

scientific article published in August 2011

Structure, diversity, and mobility of the Salmonella pathogenicity island 7 family of integrative and conjugative elements within Enterobacteriaceae

scientific article published on 13 January 2012

Telomeric expression sites are highly conserved in Trypanosoma brucei

scientific article

The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation

scientific article

The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081.

scientific article

The complete nucleotide sequence of the resistance plasmid R478: defining the backbone components of incompatibility group H conjugative plasmids through comparative genomics

scientific article published on November 2004

The evolutionary dynamics of variant antigen genes in Babesia reveal a history of genomic innovation underlying host-parasite interaction

scientific article

The genome of Rhizobium leguminosarum has recognizable core and accessory components

scientific article

The genome of a pathogenic rhodococcus: cooptive virulence underpinned by key gene acquisitions

scientific article (publication date: 30 September 2010)

The genome sequence of Trypanosoma brucei gambiense, causative agent of chronic human african trypanosomiasis

scientific article

The pCoo plasmid of enterotoxigenic Escherichia coli is a mosaic cointegrate

scientific article

Variant antigen repertoires in populations and experimental infections can be profiled from deep sequence data using universal protein motifs

scientific article published on 13 July 2018

Vector transmission regulates immune control of Plasmodium virulence

scientific article

Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance

scientific article

pfk13-Independent Treatment Failure in Four Imported Cases of Plasmodium falciparum Malaria Treated with Artemether-Lumefantrine in the United Kingdom

scientific article published on 30 January 2017