List of works - Frank Oliver Glöckner

Phylogenetic diversity and metagenomics of candidate division OP3.

scientific article

Anaerobic degradation of ethylbenzene by a new type of marine sulfate-reducing bacterium

scientific article

Identification of proteins likely to be involved in morphogenesis, cell division, and signal transduction in Planctomycetes by comparative genomics

scientific article published on September 21, 2012

Expression of sulfatases in Rhodopirellula baltica and the diversity of sulfatases in the genus Rhodopirellula.

scientific article published on 26 December 2012

Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains

scientific article

A standard MIGS/MIMS compliant XML Schema: toward the development of the Genomic Contextual Data Markup Language (GCDML).

scientific article

Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT.

scientific article

JCoast - a biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes

scientific article

A standard operating procedure for phylogenetic inference (SOPPI) using (rRNA) marker genes

scientific article

Transcriptional response of the model planctomycete Rhodopirellula baltica SH1(T) to changing environmental conditions

scientific article

Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing

scientific article

Transcriptional organization and regulation of magnetosome operons in Magnetospirillum gryphiswaldense

scientific article published in September 2006

Insights into the genomes of archaea mediating the anaerobic oxidation of methane

scientific article published in December 2005

Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics

scientific article published on 16 December 2010

Toward a standards-compliant genomic and metagenomic publication record

scientific article

Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1

scientific article

Clustered genes related to sulfate respiration in uncultured prokaryotes support the theory of their concomitant horizontal transfer

scientific article

16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides

scientific article published on 01 April 2000

Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane

scientific article published on 11 March 2016

Megx.net: integrated database resource for marine ecological genomics.

scientific article

The genomic standards consortium: bringing standards to life for microbial ecology

scientific article (publication date: October 2011)

Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.

scientific article published on 31 October 2011

Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism

scientific article published on September 28, 2010

Phylogeny-aware identification and correction of taxonomically mislabeled sequences.

scientific article

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

scientific article

Characterization of Planctomyces limnophilus and Development of Genetic Tools for Its Manipulation Establish It as a Model Species for the Phylum Planctomycetes

scientific article published on August 15, 2011

The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria

scientific article

Dethiosulfovibrio russensis sp. nov., Dethosulfovibrio marinus sp. nov. and Dethosulfovibrio acidaminovorans sp. nov., novel anaerobic, thiosulfate- and sulfur-reducing bacteria isolated from 'Thiodendron' sulfur mats in different saline environment

scientific article

Phylogenetic characterisation of picoplanktonic populations with high and low nucleic acid content in the North Atlantic Ocean.

scientific article

Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names

scientific article published on 11 February 2013

Genome and proteome characterization of the psychrophilic Flavobacterium bacteriophage 11b.

scientific article published on 25 August 2006

Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T.

scientific article

Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum

scientific article published on 01 November 2004

Expanding the World of Marine Bacterial and Archaeal Clades

scientific article

Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees

scientific article

Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data

scientific article

Genomic standards consortium projects

scientific article

Microbial diversity of the freshwater sponge Spongilla lacustris

scientific article published in August 2005

Characterisation of non-autoinducing tropodithietic Acid (TDA) production from marine sponge Pseudovibrio species.

scientific article

Phylogeny and Diversity of Achromatium oxaliferum

scientific article published on 01 February 1999

Analysis of N-acetylglucosamine metabolism in the marine bacterium Pirellula sp. strain 1 by a proteomic approach

scientific article

Phylogeny and Identification In Situ of Nevskia ramosa

scientific article published on May 1, 1998

Identification of planctomycetes with order-, genus-, and strain-specific 16S rRNA-targeted probes

scientific article published on 04 March 2004

Megx.net--database resources for marine ecological genomics

scientific article

Marine microbial genomics in Europe: current status and perspectives

scientific article (publication date: September 2010)

The founding charter of the Genomic Observatories Network

scientific article published on 7 March 2014

Ecological structuring of bacterial and archaeal taxa in surface ocean waters

scientific article

Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader

scientific article

RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits

scientific article published on 13 February 2006

Determinants and Prediction of Esterase Substrate Promiscuity Patterns.

scientific article published on 28 November 2017

List of works by Frank Oliver Glöckner

Phylogenetic diversity and metagenomics of candidate division OP3.

Anaerobic degradation of ethylbenzene by a new type of marine sulfate-reducing bacterium

Identification of proteins likely to be involved in morphogenesis, cell division, and signal transduction in Planctomycetes by comparative genomics

Expression of sulfatases in Rhodopirellula baltica and the diversity of sulfatases in the genus Rhodopirellula.

Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains

A standard MIGS/MIMS compliant XML Schema: toward the development of the Genomic Contextual Data Markup Language (GCDML).

Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT.

JCoast - a biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes

A standard operating procedure for phylogenetic inference (SOPPI) using (rRNA) marker genes

Transcriptional response of the model planctomycete Rhodopirellula baltica SH1(T) to changing environmental conditions

Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing

Transcriptional organization and regulation of magnetosome operons in Magnetospirillum gryphiswaldense

Insights into the genomes of archaea mediating the anaerobic oxidation of methane

Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics

Toward a standards-compliant genomic and metagenomic publication record

Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1

Clustered genes related to sulfate respiration in uncultured prokaryotes support the theory of their concomitant horizontal transfer

16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides

Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane

Megx.net: integrated database resource for marine ecological genomics.

The genomic standards consortium: bringing standards to life for microbial ecology

Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.

Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism

Phylogeny-aware identification and correction of taxonomically mislabeled sequences.

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

Characterization of Planctomyces limnophilus and Development of Genetic Tools for Its Manipulation Establish It as a Model Species for the Phylum Planctomycetes

The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria

Dethiosulfovibrio russensis sp. nov., Dethosulfovibrio marinus sp. nov. and Dethosulfovibrio acidaminovorans sp. nov., novel anaerobic, thiosulfate- and sulfur-reducing bacteria isolated from 'Thiodendron' sulfur mats in different saline environment

Phylogenetic characterisation of picoplanktonic populations with high and low nucleic acid content in the North Atlantic Ocean.

Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names

Genome and proteome characterization of the psychrophilic Flavobacterium bacteriophage 11b.

Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T.

Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum

Expanding the World of Marine Bacterial and Archaeal Clades

Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees

Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data

Genomic standards consortium projects

Microbial diversity of the freshwater sponge Spongilla lacustris

Characterisation of non-autoinducing tropodithietic Acid (TDA) production from marine sponge Pseudovibrio species.

Phylogeny and Diversity of Achromatium oxaliferum

Analysis of N-acetylglucosamine metabolism in the marine bacterium Pirellula sp. strain 1 by a proteomic approach

Phylogeny and Identification In Situ of Nevskia ramosa

Identification of planctomycetes with order-, genus-, and strain-specific 16S rRNA-targeted probes

Megx.net--database resources for marine ecological genomics

Marine microbial genomics in Europe: current status and perspectives

The founding charter of the Genomic Observatories Network

Ecological structuring of bacterial and archaeal taxa in surface ocean waters

Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader

RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits

Determinants and Prediction of Esterase Substrate Promiscuity Patterns.