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List of works by Frank Oliver Glöckner

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

scientific article (publication date: 2013)
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

scientific article
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

scientific article
The minimum information about a genome sequence (MIGS) specification

scientific article
SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes.

scientific article published on 3 May 2012
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.

scientific article
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences

scientific article published in September 2014
The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks

scientific article
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.

scientific article published on 16 November 2015
Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom

scientific article
The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

scientific article
Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria

scientific article
Culturability and In situ abundance of pelagic bacteria from the North Sea

scientific article
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article
Minimum Information about a Biosynthetic Gene cluster.

scientific article published on August 2015
Complete genome sequence of the marine planctomycete Pirellula sp. strain 1

scientific article
Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization.

scientific article
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

scientific article
Symbiosis insights through metagenomic analysis of a microbial consortium

scientific article
TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences

scientific article
Application of tetranucleotide frequencies for the assignment of genomic fragments

scientific article published in September 2004
Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

scientific article published on December 2006
Unlabeled helper oligonucleotides increase the in situ accessibility to 16S rRNA of fluorescently labeled oligonucleotide probes.

scientific article published on August 2000
A conspicuous nickel protein in microbial mats that oxidize methane anaerobically

scientific article
The Genomic Standards Consortium

scientific article (publication date: June 2011)
Isolation of novel pelagic bacteria from the German bight and their seasonal contributions to surface picoplankton

scientific article
Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group

scientific article
Insights into the genome of large sulfur bacteria revealed by analysis of single filaments

scientific article published in September 2007
Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses

scientific article
Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

scientific article published in August 2014
Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function

scientific article published on 20 April 2007
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

scholarly article by Henrik Nilsson et al published 29 October 2018 in Nucleic Acids Research
The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments

scientific article published on September 2004
Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean

scientific article
The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides.

scientific article published on 30 August 2013
Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective

scientific article published on September 9, 2012
Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes

scientific article
Seasonal Community and Population Dynamics of Pelagic Bacteria and Archaea in a High Mountain Lake

scientific article published on November 1, 1998
Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis

scholarly article
25 years of serving the community with ribosomal RNA gene reference databases and tools

scientific article
Genome and physiology of a model Epsilonproteobacterium responsible for sulfide detoxification in marine oxygen depletion zones

scientific article published on December 27, 2011
Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms

scientific article published on 7 April 2016
Genomics in marine monitoring: new opportunities for assessing marine health status

scientific article
Release LTPs104 of the All-Species Living Tree

scientific article
Predator-specific enrichment of actinobacteria from a cosmopolitan freshwater clade in mixed continuous culture.

scientific article
Microbial and chemical characterization of underwater fresh water springs in the Dead Sea

scientific article
Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom

scientific article published on 5 December 2014
The ocean sampling day consortium

scientific article published in 2015
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide

scientific article
Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes.

scientific article

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