List of works - François Major

A 6374 unigene set corresponding to low abundance transcripts expressed following fertilization in Solanum chacoense Bitt, and characterization of 30 receptor-like kinases

scientific article published in October 2005

A comparative analysis of the triloops in all high-resolution RNA structures reveals sequence structure relationships

scientific article published on 25 July 2007

A new catalog of protein β-sheets

scientific article published on 01 November 2005

A transcriptome-based approach to identify functional modules within and across primary human immune cells

scientific article published on 29 May 2020

An E2F/miR-20a autoregulatory feedback loop.

scientific article

Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs

scientific article published on 10 May 2019

Autism-related deficits via dysregulated eIF4E-dependent translational control

scientific article

Automated extraction and classification of RNA tertiary structure cyclic motifs

scientific article

Computational identification of RNA functional determinants by three-dimensional quantitative structure-activity relationships

scientific article

Corrigendum: RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data

scientific article published on 01 July 2017

Designing small multiple-target artificial RNAs.

scientific article

Determining RNA three-dimensional structures using low-resolution data ⬇️

scientific article published on February 23, 2012

Exploring Alternative RNA Structure Sets Using MC-Flashfold and db2cm.

scientific article

From transient recognition to efficient silencing: a RISCky business

scientific article published on 29 May 2020

Genetic mapping of activity determinants within cellular prion proteins: N-terminal modules in PrPC offset pro-apoptotic activity of the Doppel helix B/B' region

scientific article

Identification of a conserved RNA motif essential for She2p recognition and mRNA localization to the yeast bud.

scientific article

Identification of two distinct intracellular localization signals in STT3-B.

scientific article published on 2 November 2005

Implication of the prohead RNA in phage phi29 DNA packaging

scientific article

MiRBooking simulates the stoichiometric mode of action of microRNAs

scientific article

Modeling RNA tertiary structure motifs by graph-grammars

scientific article published on 21 February 2007

Modifications and deletions of helices within the hairpin ribozyme-substrate complex: an active ribozyme lacking helix 1.

scientific article

Molecular basis of TRAP-5'SL RNA interaction in the Bacillus subtilis trp operon transcription attenuation mechanism

scientific article

NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions

scientific article

NMR structure of the active conformation of the Varkud satellite ribozyme cleavage site

scientific article (publication date: 10 June 2003)

New metrics for comparing and assessing discrepancies between RNA 3D structures and models

scientific article published on 26 August 2009

Noncoding regions of C. elegans mRNA undergo selective adenosine to inosine deamination and contain a small number of editing sites per transcript

scientific article published on January 2015

Parametrization of a force field for metals complexed to biomacromolecules: applications to Fe(II), Cu(II) and Pb(II)

scientific article published on 01 August 2002

Predict RNA 2D and 3D Structure over the Internet Using MC-Tools

RKB: a Semantic Web knowledge base for RNA.

scientific article

RNA G-Quadruplexes in the model plant species Arabidopsis thaliana: prevalence and possible functional roles ⬇️

scientific article published on September 21, 2010

RNA canonical and non-canonical base pairing types: a recognition method and complete repertoire

scientific article

RNA structure determination using SAXS data

scientific article

RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data.

scientific article

RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures

scientific article published on 16 April 2015

RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme

scientific article

RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers

scientific article published on 05 May 2020

RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction

scientific article published on 23 February 2012

RNAML: a standard syntax for exchanging RNA information.

scientific article

Ranking the factors that contribute to protein β-sheet folding

scientific article published on 01 September 2007

Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA.

scientific article

Role of SLV in SLI substrate recognition by the Neurospora VS ribozyme

scientific article published on 26 February 2008

Staufen1 regulates diverse classes of mammalian transcripts

scientific article published on 17 May 2007

Structural dynamics control the MicroRNA maturation pathway.

scientific article published on 19 September 2016

Structural messenger RNA contains cytokeratin polymerization and depolymerization signals

scientific article published on 11 October 2011

The ERPIN server: an interface to profile-based RNA motif identification

scientific article

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

scientific article

The RNA Ontology Consortium: an open invitation to the RNA community

scientific article published on 16 February 2006

The sequence features that define efficient and specific hAGO2-dependent miRNA silencing guides

scientific article published on 01 September 2018

Towards 3D structure prediction of large RNA molecules: an integer programming framework to insert local 3D motifs in RNA secondary structure

scientific article published on June 2012

List of works by François Major

A 6374 unigene set corresponding to low abundance transcripts expressed following fertilization in Solanum chacoense Bitt, and characterization of 30 receptor-like kinases

A comparative analysis of the triloops in all high-resolution RNA structures reveals sequence structure relationships

A new catalog of protein β-sheets

A transcriptome-based approach to identify functional modules within and across primary human immune cells

An E2F/miR-20a autoregulatory feedback loop.

Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs

Autism-related deficits via dysregulated eIF4E-dependent translational control

Automated extraction and classification of RNA tertiary structure cyclic motifs

Computational identification of RNA functional determinants by three-dimensional quantitative structure-activity relationships

Corrigendum: RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data

Designing small multiple-target artificial RNAs.

Determining RNA three-dimensional structures using low-resolution data ⬇️

Exploring Alternative RNA Structure Sets Using MC-Flashfold and db2cm.

From transient recognition to efficient silencing: a RISCky business

Genetic mapping of activity determinants within cellular prion proteins: N-terminal modules in PrPC offset pro-apoptotic activity of the Doppel helix B/B' region

Identification of a conserved RNA motif essential for She2p recognition and mRNA localization to the yeast bud.

Identification of two distinct intracellular localization signals in STT3-B.

Implication of the prohead RNA in phage phi29 DNA packaging

MiRBooking simulates the stoichiometric mode of action of microRNAs

Modeling RNA tertiary structure motifs by graph-grammars

Modifications and deletions of helices within the hairpin ribozyme-substrate complex: an active ribozyme lacking helix 1.

Molecular basis of TRAP-5'SL RNA interaction in the Bacillus subtilis trp operon transcription attenuation mechanism

NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions

NMR structure of the active conformation of the Varkud satellite ribozyme cleavage site

New metrics for comparing and assessing discrepancies between RNA 3D structures and models

Noncoding regions of C. elegans mRNA undergo selective adenosine to inosine deamination and contain a small number of editing sites per transcript

Parametrization of a force field for metals complexed to biomacromolecules: applications to Fe(II), Cu(II) and Pb(II)

Predict RNA 2D and 3D Structure over the Internet Using MC-Tools

RKB: a Semantic Web knowledge base for RNA.

RNA G-Quadruplexes in the model plant species Arabidopsis thaliana: prevalence and possible functional roles ⬇️

RNA canonical and non-canonical base pairing types: a recognition method and complete repertoire

RNA structure determination using SAXS data

RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data.

RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures

RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme

RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers

RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction

RNAML: a standard syntax for exchanging RNA information.

Ranking the factors that contribute to protein β-sheet folding

Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA.

Role of SLV in SLI substrate recognition by the Neurospora VS ribozyme

Staufen1 regulates diverse classes of mammalian transcripts

Structural dynamics control the MicroRNA maturation pathway.

Structural messenger RNA contains cytokeratin polymerization and depolymerization signals

The ERPIN server: an interface to profile-based RNA motif identification

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

The RNA Ontology Consortium: an open invitation to the RNA community

The sequence features that define efficient and specific hAGO2-dependent miRNA silencing guides

Towards 3D structure prediction of large RNA molecules: an integer programming framework to insert local 3D motifs in RNA secondary structure