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List of works by Anne-Claude Gavin

3rd US-EU workshop: systems level understanding of DNA damage responses

scientific article

A Conserved Circular Network of Coregulated Lipids Modulates Innate Immune Responses

scientific article published on 18 June 2015

A complex prediction: three-dimensional model of the yeast exosome.

scientific article published on July 2002

A generic protocol for the purification and characterization of water-soluble complexes of affinity-tagged proteins and lipids

scientific article published on 28 August 2014

A link between MAP kinase and p34cdc2/cyclin B during oocyte maturation: p90rsk phosphorylates and inactivates the p34cdc2 inhibitory kinase Myt1 ⬇️

scientific article published on September 1, 1998

A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway

scientific article

A protocol for the systematic and quantitative measurement of protein-lipid interactions using the liposome-microarray-based assay

scientific article published on 5 May 2016

A quantitative liposome microarray to systematically characterize protein-lipid interactions

scientific article published on 24 November 2013

A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae

scientific article

An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum

scientific article published on 14 November 2014

Bifunctional Sphingosine for Cell-Based Analysis of Protein-Sphingolipid Interactions

scientific article published on 11 November 2015

Capturing protein communities by structural proteomics in a thermophilic eukaryote.

scientific article published on 25 July 2017

Casein kinase 2-dependent serine phosphorylation of MuSK regulates acetylcholine receptor aggregation at the neuromuscular junction

scientific article

Cell metabolism regulates integrin mechanosensing via an SLC3A2-dependent sphingolipid biosynthesis pathway

scientific article published in Nature Communications

Cell type-specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP.

scientific article

Cell-specific proteome analyses of human bone marrow reveal molecular features of age-dependent functional decline

scientific article published in Nature Communications

Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding

scientific article published on January 2013

Coupling proteomics and metabolomics for the unsupervised identification of protein-metabolite interactions in Chaetomium thermophilum

scientific article published on 09 July 2021

Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium.

scientific article published on 28 February 2012

Deciphering a global network of functionally associated post-translational modifications

scientific article

Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium

scientific article

Detection and characterization of protein interactions in vivo by a simple live-cell imaging method

scientific article

Drug target identification using side-effect similarity

scientific article (publication date: 11 July 2008)

Dynamic Buffering of Extracellular Chemokine by a Dedicated Scavenger Pathway Enables Robust Adaptation during Directed Tissue Migration

scientific article published on 13 February 2020

Enzymatic complexes across scales

scholarly article by Panagiotis L Kastritis published in October 2018

Functional organization of the yeast proteome by systematic analysis of protein complexes

scientific article

Identification of metabolites from tandem mass spectra with a machine learning approach utilizing structural features

scholarly article published 11 March 2019

Identification of metabolites from tandem mass spectra with a machine learning approach utilizing structural features

scientific article published on 01 February 2020

Impact of genome reduction on bacterial metabolism and its regulation.

scientific article published in November 2009

Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associations

article

In vivo profiling and visualization of cellular protein-lipid interactions using bifunctional fatty acids.

scientific article published on 28 February 2013

Induction of M-phase entry of prophase-blocked mouse oocytes through microinjection of okadaic acid, a specific phosphatase inhibitor ⬇️

scientific article published on January 1, 1991

Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances

scientific article published on 14 January 2016

Interaction networks for systems biology

scientific article published on 20 February 2008

Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins

scientific article

Keystone symposia: Proteomics and Bioinformatics and Systems and Biology

Lipid Cooperativity as a General Membrane-Recruitment Principle for PH Domains

scientific article published on 19 August 2015

Mass spectrometry reveals stable modules in holo and apo RNA polymerases I and III.

scientific article published in January 2011

Meeting Report on the 7th World Congress of the Human Proteome Organization (HUPO) in Amsterdam

article

Modules, networks and systems medicine for understanding disease and aiding diagnosis.

scientific article

Network Biology editorial 2013.

scientific article

New perspectives on an old disease: proteomics in cancer research

scientific article published on January 2007

Okadaic acid and p13suc1 modulate the reinitiation of meiosis in mouse oocytes

scientific article published on November 1, 1992

PRL-3 disrupts epithelial architecture by altering the post-mitotic midbody position

scientific article published on 21 September 2016

Protein complexes and proteome organization from yeast to man.

scientific article

Proteome organization in a genome-reduced bacterium

scientific journal article

Proteome survey reveals modularity of the yeast cell machinery

scientific article

Quantification of mRNA and protein and integration with protein turnover in a bacterium

scientific article published on 19 July 2011

Quantitative mass spectrometry of posttranslational modifications: keys to confidence

scientific article published on 07 April 2015

Recent advances in charting protein-protein interaction: mass spectrometry-based approaches

scientific article published on 09 October 2010

SnapShot: Protein-Protein Interaction Networks

Structural Analyses of the Slm1-PH Domain Demonstrate Ligand Binding in the Non-Canonical Site

scientific article

Structural and Functional Characterization of a Phosphatase Domain within Yeast General Transcription Factor IIIC

scientific article

Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase

scientific article published on 13 December 2017

Structure of the Kti11/Kti13 heterodimer and its double role in modifications of tRNA and eukaryotic elongation factor 2

scientific article

Structure-based assembly of protein complexes in yeast

scientific article

Systematic identification of phosphorylation-mediated protein interaction switches

scientific article

Systematic identification of proteins that elicit drug side effects

scientific article (publication date: 28 April 2014)

The deca-GX3 proteins Yae1-Lto1 function as adaptors recruiting the ABC protein Rli1 for iron-sulfur cluster insertion.

scientific article published on 16 July 2015

The minimum information required for reporting a molecular interaction experiment (MIMIx).

scientific article published on August 2007

The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling

scientific article

The social network of a cell: recent advances in interactome mapping

scientific article published on January 2008

The systematic analysis of protein–lipid interactions comes of age

article

Towards quantitative analysis of proteome dynamics

scientific article

Transcription start site associated RNAs in bacteria.

scientific article published on 22 May 2012

Transcriptome Complexity in a Genome-Reduced Bacterium

scientific article

Visualization of omics data for systems biology

scientific article

Visualizing biological data-now and in the future

scientific article

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