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List of works by Omar Rota-Stabelli

A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance

scientific article published on 17 September 2019

A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata

scientific article

A multi criterion approach for the selection of optimal outgroups in phylogeny: recovering some support for Mandibulata over Myriochelata using mitogenomics

scientific article published on 04 April 2008

Age, tissue, genotype and virus infection regulate Wolbachia levels in Drosophila

scientific article published on 11 May 2020

Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations

scientific article published on 08 June 2020

Bioinformatics methods for the comparative analysis of metazoan mitochondrial genome sequences.

scientific article published on 28 September 2012

Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes

scientific article published on 02 September 2019

Complete mitochondrial genomes from transcriptomes: assessing pros and cons of data mining for assembling new mitogenomes

scientific article published on 15 October 2019

Correction: Wolbachia in European Populations of the Invasive Pest Drosophila suzukii: Regional Variation in Infection Frequencies. ⬇️

scientific article published on 19 February 2016

Distinct genotypes and phenotypes in European and American strains of Drosophila suzukii: implications for biology and management of an invasive organism

scientific article published on 06 November 2019

Divergence and hybridization in sea turtles: Inferences from genome data show evidence of ancient gene flow between species

scientific article published in 2021

Draft Genome Sequence of the Wolbachia Endosymbiont of Drosophila suzukii

scientific article published on January 2013

Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource

scientific article

Drosophila suzukii

scientific article

Ecdysozoan mitogenomics: evidence for a common origin of the legged invertebrates, the Panarthropoda

scientific article

Evolutionary Insights into Taste Perception of the Invasive Pest Drosophila suzukii. ⬇️

scientific article published on 19 October 2016

Evolutionary scenarios for the origin of an Antarctic tardigrade species based on molecular clock analyses and biogeographic data

scholarly article in Contributions to Zoology, vol. 86 no. 2, May 2017

Extracting spatio-temporal patterns in animal trajectories: an ecological application of sequence analysis methods

scientific article published on 6 September 2015

Genome Comparisons Indicate Recent Transfer OfwRi-LikeWolbachiaBetween Sister SpeciesDrosophila suzukiiAndD. subpulchrella

scientific article published on 8 May 2017

Genome comparisons indicate recent transfer of wRi-like Wolbachia between sister species Drosophila suzukii and D. subpulchrella.

scientific article

Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses

scientific article published on 15 May 2020

Genomic analysis of European Drosophila populations reveals longitudinal structure and continent-wide selection

scientific article published on 3 May 2018

Genomic data do not support comb jellies as the sister group to all other animals

scientific article

Gibberellin metabolism in Vitis vinifera L. during bloom and fruit-set: functional characterization and evolution of grapevine gibberellin oxidases.

scientific article published on 4 September 2013

Improved Modeling of Compositional Heterogeneity Supports Sponges as Sister to All Other Animals

scientific article published on 22 November 2017

Insertion sequence polymorphism and genomic rearrangements uncover hidden Wolbachia diversity in Drosophila suzukii and D. subpulchrella

scientific article published on November 2017

Interkingdom transfer of the acne-causing agent, Propionibacterium acnes, from human to grapevine

scientific article

Large scale genome reconstructions illuminate Wolbachia evolution

scientific article published on 16 October 2020

Linking genomics and ecology to investigate the complex evolution of an invasive Drosophila pest ⬇️

scientific article (publication date: 2013)

Loss of Drosophila pheromone reverses its role in sexual communication in Drosophila suzukii

scientific article published in April 2015

MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda

scientific article

Mitogenomics and phylogenomics reveal priapulid worms as extant models of the ancestral Ecdysozoan.

scientific article

Molecular timetrees reveal a Cambrian colonization of land and a new scenario for ecdysozoan evolution

scientific article published on 31 January 2013

Molecular-based estimate of species number, phylogenetic relationships and divergence times for the genus Stenotaenia (Chilopoda, Geophilomorpha) in the Italian region

scientific article

MtZoa: a general mitochondrial amino acid substitutions model for animal evolutionary studies

scientific article published on 01 July 2009

Multiple lines of evidence for reproductive winter diapause in the invasive pest Drosophila suzukii: useful clues for control strategies

article

Olfactory responses ofDrosophila suzukiifemales to host plant volatiles

article

On the correct interpretation of similarity index in codon usage studies: comparison with four other metrics and implications for Zika and West Nile virus

scientific article published on 17 July 2020

Phylogenomic proof of Recurrent Demipolyploidization and Evolutionary Stalling of the "Triploid Bridge" in Arundo (Poaceae)

scientific article published on 24 July 2020

Phylogeny and evolution of Didymosphaeriaceae (Pleosporales): new Iranian samples and hosts, first divergence estimates, and multiple evidences of species mis-identifications

scientific article published on 20 November 2019

Reconstruction of ancient microbial genomes from the human gut

scientific article published on 12 May 2021

Relaxed selective constraints drove functional modifications in peripheral photoreception of the cavefish P. andruzzii and provide insight into the time of cave colonization

scientific article

Reply to Halanych et al.: Ctenophore misplacement is corroborated by independent datasets

scientific article published on 9 February 2016

Sensory Neuroscience: A Taste for Light and the Origin of Animal Vision

scientific article published on 01 July 2020

Serine codon-usage bias in deep phylogenomics: pancrustacean relationships as a case study

scientific article

Structural and transcriptional evidence of mechanotransduction in the Drosophila suzukii ovipositor

scientific article published on 08 July 2020

Survival and divergence in a small group: The extraordinary genomic history of the endangered Apennine brown bear stragglers

scientific article published on 24 October 2017

TRPA5, an Ankyrin Subfamily Insect TRP Channel, is Expressed in Antennae of Cydia pomonella (Lepidoptera: Tortricidae) in Multiple Splice Variants

scientific article

The Evolution of Olfactory Gene Families in Drosophila and the Genomic Basis of chemical-Ecological Adaptation in Drosophila suzukii

scientific article

The Glossina Genome Cluster: Comparative Genomic Analysis of the Vectors of African Trypanosomes

The Impact of Fast Radiation on the Phylogeny of Bactrocera Fruit Flies as Revealed by Multiple Evolutionary Models and Mutation Rate-Calibrated Clock

scientific article published in 2022

The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations

scientific article published on 10 October 2019

The comb jelly opsins and the origins of animal phototransduction.

scientific article published on 24 July 2014

The discovery, distribution, and diversity of DNA viruses associated with in Europe

The evolution of the Ecdysozoa

scientific article

The mitochondrial genome structure of Xenoturbella bocki (phylum Xenoturbellida) is ancestral within the deuterostomes

scientific article

Whole-genome epidemiology, characterisation, and phylogenetic reconstruction of Staphylococcus aureus strains in a paediatric hospital

scholarly article by Serena Manara published in November 2018

Wolbachia in European Populations of the Invasive Pest Drosophila suzukii: Regional Variation in Infection Frequencies ⬇️

scientific article published on 25 January 2016

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