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List of works by Sébastien Calvignac-Spencer

A cautionary note on fecal sampling and molecular epidemiology in predatory wild great apes

scientific article published on June 2015

A novel human polyomavirus closely related to the african green monkey-derived lymphotropic polyomavirus

scientific article

A taxonomy update for the family Polyomaviridae

scientific article published on 29 February 2016

Adenovirus in Rural Côte D'Ivoire: High Diversity and Cross-Species Detection

scientific article published on 20 May 2015

African great apes are naturally infected with polyomaviruses closely related to Merkel cell polyomavirus

scientific article

Age-related effects on malaria parasite infection in wild chimpanzees

scientific article published on 29 May 2013

An invertebrate stomach's view on vertebrate ecology: certain invertebrates could be used as "vertebrate samplers" and deliver DNA-based information on many aspects of vertebrate ecology

scientific article

Ancient DNA evidence for the loss of a highly divergent brown bear clade during historical times.

scientific article

Ancient DNA identification of early 20th century simian T-cell leukemia virus type 1.

scientific article

Ancient Recombination Events between Human Herpes Simplex Viruses

scientific article

Aquatic biodiversity assessment for the lazy

scientific article published in February 2016

Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic

scientific article published on 10 May 2022

Assessing Host-Virus Codivergence for Close Relatives of Merkel Cell Polyomavirus Infecting African Great Apes

scientific article published on 20 July 2016

Assessing the Evidence Supporting Fruit Bats as the Primary Reservoirs for Ebola Viruses

scientific article published on 13 August 2015

Assessing the feasibility of fly based surveillance of wildlife infectious diseases.

scientific article

Bacillus cereus Biovar Anthracis Causing Anthrax in Sub-Saharan Africa-Chromosomal Monophyly and Broad Geographic Distribution

scientific article

Biology, evolution, and medical importance of polyomaviruses: An update.

scientific article

Bushmeat Hunting and Zoonotic Transmission of Simian T-Lymphotropic Virus 1 in Tropical West and Central Africa

scientific article published on 15 March 2017

Carrion fly-derived DNA as a tool for comprehensive and cost-effective assessment of mammalian biodiversity

scientific article

Clock Rooting Further Demonstrates that Guinea 2014 EBOV is a Member of the Zaïre Lineage

scientific article

Codetection of Respiratory Syncytial Virus in Habituated Wild Western Lowland Gorillas and Humans During a Respiratory Disease Outbreak

scientific article published on 19 July 2016

Comparison of mosquito and fly derived <scp>DNA</scp> as a tool for sampling vertebrate biodiversity in suburban forests in Berlin, Germany

scientific article published on 22 February 2023

Comparison of target enrichment strategies for ancient pathogen DNA

scientific article published on 02 November 2020

Connecting Earth observation to high-throughput biodiversity data

article by Alex Bush et al published 22 June 2017 in Nature Ecology and Evolution

Cytomegalovirus distribution and evolution in hominines

scientific article published on 01 July 2019

Cytomegaloviruses in a Community of Wild Nonhuman Primates in Taï National Park, Côte D'Ivoire

scientific article published on 29 December 2017

DNA from extinct giant lemurs links archaeolemurids to extant indriids

scientific article published in 2008

Detection of retroviral super-infection from non-invasive samples

scientific article

Does the 43 bp sequence from an 800,000 year old cretan dwarf elephantid really rewrite the textbook on mammoths?

scientific article (publication date: 22 February 2007)

E box motifs as mediators of proviral latency of human retroviruses.

scientific article published on 16 September 2009

Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions

scientific article published on 01 October 2021

Evidence for Human Streptococcus pneumoniae in wild and captive chimpanzees: A potential threat to wild populations

scientific article

Evidence for continuing cross-species transmission of SIVsmm to humans: characterization of a new HIV-2 lineage in rural Côte d'Ivoire

scientific article published on September 2013

Genetic diversity of endangered brown bear (Ursus arctos) populations at the crossroads of Europe, Asia and Africa

article

Genome Sequence of a Central Chimpanzee-Associated Polyomavirus Related to BK and JC Polyomaviruses, Pan troglodytes troglodytes Polyomavirus 1.

scientific article

Hemoparasites in a wild primate: Infection patterns suggest interaction of Plasmodium and Babesia in a lemur species

scientific article

High prevalence and diversity of species D adenoviruses (HAdV-D) in human populations of four Sub-Saharan countries

scientific article published on 11 February 2014

High prevalence, coinfection rate, and genetic diversity of retroviruses in wild red colobus monkeys (Piliocolobus badius badius) in Tai National Park, Cote d'Ivoire

scientific article

Human Respiratory Syncytial Virus and Streptococcus pneumoniae Infection in Wild Bonobos

scientific article published on 27 February 2018

ICTV Virus Taxonomy Profile: Polyomaviridae

scientific article published on 22 June 2017

Identification of a novel human polyomavirus in organs of the gastrointestinal tract

scientific article

Investigating the zoonotic origin of the West African Ebola epidemic

scientific article

Lassa Virus in Multimammate Rats, Côte d'Ivoire, 2013

scientific article published on August 2015

Leprosy in wild chimpanzees

scientific article published in 2021

Malaria parasite detection increases during pregnancy in wild chimpanzees

scientific article

Measles virus and rinderpest virus divergence dated to the sixth century BCE

scientific article published on 01 June 2020

Metabarcoding of eukaryotic parasite communities describes diverse parasite assemblages spanning the primate phylogeny

scientific article published on 04 November 2019

Mito-communications

scientific article published on 04 April 2009

Mother-offspring transmission and age-dependent accumulation of simian foamy virus in wild chimpanzees

scientific article published on 28 February 2013

Multiple Cross-Species Transmission Events of Human Adenoviruses (HAdV) during Hominine Evolution

scientific article

Méthodes alternatives pour l’étude de la diversité génétique rétrovirale simienne

scientific article published on 01 June 2008

Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee

scientific article published on June 2013

Novel Polyomaviruses in Mammals from Multiple Orders and Reassessment of Polyomavirus Evolution and Taxonomy

scientific article published on 10 October 2019

Novel polyomaviruses in shrews (Soricidae) with close similarity to human polyomavirus 12.

scientific article published on 2 November 2017

Novel polyomaviruses of nonhuman primates: genetic and serological predictors for the existence of multiple unknown polyomaviruses within the human population

scientific article

One Hundred Twenty Years of Koala Retrovirus Evolution Determined from Museum Skins

scientific article published in 2013

One hundred twenty years of koala retrovirus evolution determined from museum skins

scientific article

Origin of human T-lymphotropic virus type 1 in rural Côte d'Ivoire

scientific article

Persistent anthrax as a major driver of wildlife mortality in a tropical rainforest

scientific article

Phylogeographic analysis reveals an ancient East African origin of human herpes simplex virus 2 dispersal out-of-Africa

scientific article published in 2022

Preventing the pollution of mitochondrial datasets with nuclear mitochondrial paralogs (numts).

scientific article published in November 2010

Risk of human-to-wildlife transmission of SARS-CoV-2

scientific article published on 06 October 2020

Seasonal and inter-annual variation of malaria parasite detection in wild chimpanzees

scientific article published on 18 January 2018

Targeted detection of mammalian species using carrion fly-derived DNA.

scientific article

The One Past Health workshop: connecting ancient DNA and zoonosis research.

scientific article published on 8 June 2017

The ecology of primate retroviruses - an assessment of 12 years of retroviral studies in the Taï national park area, Côte d׳Ivoire

scientific article

Tools for opening new chapters in the book of Treponema pallidum evolutionary history

scientific article

Tropical rainforest flies carrying pathogens form stable associations with social nonhuman primates

scientific article published on 18 July 2019

Wild great apes as sentinels and sources of infectious disease.

scientific article published on 27 March 2012

iDNA from terrestrial haematophagous leeches as a wildlife surveying and monitoring tool - prospects, pitfalls and avenues to be developed

scientific article

Événements climatiques et structuration géographique de la diversité génétique

scientific article published on 01 August 2008

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