List of works - Marta Giovanetti

A Retrospective Overview of Zika Virus Evolution in the Midwest of Brazil

scientific article published in 2022

A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes

scientific article

A doubt of multiple introduction of SARS-CoV-2 in Italy: A preliminary overview

scientific article published on 19 March 2020

A persistently replicating SARS-CoV-2 variant derived from an asymptomatic individual

scientific article published on 23 September 2020

A32 Genomic surveillance of Zika virus transmission in the Amazonas State, Brazil

scholarly article by Marta Giovanetti et al published 22 August 2019 in Virus Evolution

Acute Vector-Borne Viral Infection: Zika and MinION Surveillance

scientific article published on 01 July 2019

Amino acid mutations in Ebola virus glycoprotein of the 2014 epidemic

scientific article published on 17 March 2015

An epidemiological investigation to reconstruct a probable human immunodeficiency virus-1 transmission network: a case report

scientific article

Analysis of the ORFK1 hypervariable regions reveal distinct HHV-8 clustering in Kaposi's sarcoma and non-Kaposi's cases

scientific article

Application of the ARIMA model on the COVID-2019 epidemic dataset

scientific article published on 26 February 2020

COVID-2019: The role of the nsp2 and nsp3 in its pathogenesis

scientific article published on 21 February 2020

Characterization of spotted fever group Rickettsiae in ticks from a city park of Rome, Italy

scientific article published on October 2015

Chikungunya virus outbreak in the Amazon region: replacement of the Asian genotype by an ECSA lineage

article

Circulation of chikungunya virus East/Central/South African lineage in Rio de Janeiro, Brazil

scientific article published in 2019

Co-Circulation of Two Independent Clades and Persistence of CHIKV-ECSA Genotype during Epidemic Waves in Rio de Janeiro, Southeast Brazil

scientific article published on 26 November 2020

Correction for Giovanetti et al., "Yellow Fever Virus Reemergence and Spread in Southeast Brazil, 2016-2019"

scientific article published on 18 May 2020

Deep Sequencing Analysis of Human T Cell Lymphotropic Virus Type 1 Long Terminal Repeat 5' Region from Patients with Tropical Spastic Paraparesis/Human T Cell Lymphotropic Virus Type 1-Associated Myelopathy and Asymptomatic Carriers

scientific article

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

scientific article published on 30 May 2020

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

scientific article published on 12 November 2020

Emerging of a SARS-CoV-2 viral strain with a deletion in nsp1

scientific article published on 31 August 2020

Epidemic establishment and cryptic transmission of Zika virus in Brazil and the Americas

scientific article

Epidemiological history and phylogeography of West Nile virus lineage 2.

scientific article published on 29 March 2013

Erratum to: Molecular epidemiology and phylogenetic analysis of Hepatitis B virus in a group of migrants in Italy

scientific article published on 17 November 2015

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

scientific article (publication date: 24 May 2017)

Evidence for mutations in SARS-CoV-2 Italian isolates potentially affecting virus transmission

scientific article published on 03 June 2020

Evolution patterns of SARS-CoV-2: Snapshot on its genome variants

scientific article published on 06 November 2020

Evolutionary analysis of SARS-CoV-2: how mutation of Non-Structural Protein 6 (NSP6) could affect viral autophagy

scientific article published on 10 April 2020

Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil

scientific article published on 16 April 2021

Full-genome characterization of a G8P[8] rotavirus that emerged among children with diarrhea in Croatia in 2006

scientific article published on 20 February 2013

Genetic and Structural Data on the SARS-CoV-2 Omicron BQ.1 Variant Reveal Its Low Potential for Epidemiological Expansion

scientific article published in 2022

Genetic diversity in Ebola virus: Phylogenetic and in silico structural studies of Ebola viral proteins

scientific article published on 9 March 2016

Genetic diversity of the haemagglutinin (HA) of human influenza a (H1N1) virus in montenegro: Focus on its origin and evolution

scientific article

Genetic evidence of Zika virus in mother's breast milk and body fluids of a newborn with severe congenital defects.

scientific article published on 12 June 2018

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes

scientific article

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes

scientific article published on 28 February 2020

Genomic Surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018

scientific article published on 07 August 2020

Genomic and Epidemiological Surveillance of Zika Virus in the Amazon Region

scientific article published on 01 February 2020

Genomic and epidemiological monitoring of yellow fever virus transmission potential

article

Genomic, epidemiological and digital surveillance of Chikungunya virus in the Brazilian Amazon

article

HIV rapid testing in community and outreach sites: results of a nationwide demonstration project in Italy.

scientific article published on 18 June 2018

HIV type 1 origin and transmission dynamics among different risk groups in sardinia: molecular epidemiology within the close boundaries of an Italian island

scientific article published on 5 November 2012

HIV-1 non-B subtypes in Italy: a growing trend.

scientific article published on October 2012

HTLV-1aA introduction into Brazil and its association with the trans-Atlantic slave trade.

scientific article

Hepatitis A virus in a medical setting in Madagascar: a lesson for public health

scientific article published on January 2015

Hepatitis B virus genotype and subgenotype prevalence and distribution in Montenegro

scientific article published on 24 February 2015

Hepatitis E Virus Circulation in Italy: Phylogenetic and Evolutionary Analysis

scientific article published on 12 March 2016

Impact of spatial dispersion, evolution, and selection on Ebola Zaire Virus epidemic waves

scientific article

Initial introduction and spread of the SARS‐CoV‐2 AY.4.2.1 Delta variant in Bulgaria, a genomic insight

scientific article published in 2022

Lipidomic Analysis Reveals Serum Alteration of Plasmalogens in Patients Infected With ZIKA Virus

scientific article published on 12 April 2019

MISSEL: a method to identify a large number of small species-specific genomic subsequences and its application to viruses classification.

scientific article published on 06 December 2016

Migration patterns of HIV-1 subtype B virus in Northern Italy.

scientific article published on January 2013

Mobile health clinic for the medical management of clinical sequelae experienced by survivors of the 2013-2016 Ebola virus disease outbreak in Sierra Leone, West Africa

scientific article

Molecular Characterization of the Human Immunodeficiency Virus Type 1 in Women and Their Vertically Infected Children

scientific article

Molecular Epidemiology of HIV-1 in African Countries: A Comprehensive Overview

scientific article published on 21 December 2020

Molecular In-Depth on the Epidemiological Expansion of SARS-CoV-2 XBB.1.5

Molecular epidemiology and genetic diversity of human rhinovirus affecting hospitalized children in Rome

scientific article published on 27 April 2013

Molecular epidemiology and phylogenetic analysis of Hepatitis B virus in a group of migrants in Italy

scientific article published on 25 July 2015

Multi-epitope based vaccine against yellow fever virus applying immunoinformatics approaches

scientific article published on 06 January 2020

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

scientific article (publication date: 9 January 2017)

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples.

scientific article

Natural selection versus creation: a review on the origin of SARS-COV-2 ⬇️

scientific article published on 01 September 2020

Neonatal surveillance for congenital Zika infection during the 2016 microcephaly outbreak in Salvador, Brazil: Zika virus detection in asymptomatic newborns

scientific article published on 01 January 2020

Newborns with Zika virus-associated microcephaly exhibit marked systemic inflammatory imbalance

scientific article published on 20 April 2020

Opsoclonus-myoclonus-ataxia syndrome associated with chikungunya and dengue virus co-infection

scientific article published on 01 August 2018

Origin and evolution of Nipah virus

scientific article

Persistence of chikungunya ECSA genotype and local outbreak in an upper medium class neighborhood in Northeast Brazil

scientific article published on 08 January 2020

Phylogenesys and homology modeling in Zika virus epidemic: food for thought

scientific article published on 27 September 2016

Phylogenetic Analysis of Human Immunodeficiency Virus Type 2 Group B.

scientific article published on July 2016

Phylogeny of Dengue and Chikungunya viruses in Al Hudayda governorate, Yemen

scientific article published on 23 August 2014

Phylogeny of Murray Valley encephalitis virus in Australia and Papua New Guinea

scientific article

Pluripotency of against Arboviruses: the case of yellow fever

scientific article published in 2019

Potential chimeric peptides to block the SARS-CoV-2 spike receptor-binding domain

scientific article published on 09 June 2020

Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa

scientific article published on 07 January 2022

Reliable timescale inference of HBV genotype A origin and phylodynamics

scientific article published on 14 March 2015

Response to Carletti et al, "About the origin of the first two SARS-CoV-2 infections in Italy: Inference not supported by appropriate sequence analysis"

scientific article published on 03 April 2020

Response to Ribeiro da Silva et al.,"Role of Nonstructural Proteins in the Pathogenesis of SARS-CoV-2

scientific article published on 10 April 2020

Retrospective Investigation in Horses with Encephalitis Reveals Unnoticed Circulation of West Nile Virus in Brazil

scientific article published on 15 July 2022

Return of the founder Chikungunya virus to its place of introduction into Brazil is revealed by genomic characterization of exanthematic disease cases

scientific article published on 27 December 2019

Role of individual's T-cell immunome in controlling HIV-1 progression

scientific article published on December 2014

SARS-CoV-2 epidemic in Brazil: how the displacement of variants has driven distinct epidemic waves

scientific article published on 21 April 2022

SARS-CoV-2 shifting transmission dynamics and hidden reservoirs potentially limit efficacy of public health interventions in Italy

scientific article published on 21 April 2021

Sars-CoV-2 Envelope and Membrane Proteins: Structural Differences Linked to Virus Characteristics?

scientific article published on 30 May 2020

Seroprevalence of Ebola virus infection in Bombali District, Sierra Leone.

scientific article published on 31 December 2017

Severe airport sanitarian control could slow down the spreading of COVID-19 pandemics in Brazil

scientific article (preprint)

Severe airport sanitarian control could slow down the spreading of COVID-19 pandemics in Brazil

scientific article published on 25 June 2020

Single-Gene Versus Double-Gene Tree Analyses in Molecular Classification of Saudi Venomous Snakes

article

The 2019-new coronavirus epidemic: Evidence for virus evolution

scientific article published on 07 February 2020

The Biological Properties of the SARS-CoV-2 Cameroon Variant Spike: An Intermediate between the Alpha and Delta Variants

scientific article published in 2022

The SARS-CoV-2 Mu variant should not be left aside: It warrants attention for its immuno-escaping ability

scientific article published on 28 February 2022

The first two cases of 2019-nCoV in Italy: Where they come from?

scientific article published on 12 February 2020

The global spread of 2019-nCoV: a molecular evolutionary analysis

scientific article published on 12 February 2020

The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing

scientific article published on 29 July 2020

The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing.

scientific article published on 11 May 2020

Two Distinct Hepatitis C Virus Genotype 1a Clades Have Different Geographical Distribution and Association With Natural Resistance to NS3 Protease Inhibitors

scientific article published on 31 March 2015

Untargeted Metabolomics Insights into Newborns with Congenital Zika Infection

scientific article published in 2021

Viral Metagenomics for the Identification of Emerging Infections in Clinical Samples with Inconclusive Dengue, Zika, and Chikungunya Viral Amplification

scientific article published in 2022

When phylogenetic analysis complements the epidemiological investigation: a case of HIV-2 infection, Italy

scientific article published on January 2013

Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic

scientific article published on 17 August 2020

Yellow Fever Virus Reemergence and Spread in Southeast Brazil, 2016-2019

scientific article published on 12 December 2019

Yellow fever transmission in non-human primates, Bahia, Northeastern Brazil

scientific article published on 11 August 2020

Zika Virus spreading in South America: Evolutionary analysis of emerging neutralizing resistant Phe279Ser strains

scientific article

Zika virus complete genome from Salvador, Bahia, Brazil

scientific article (publication date: July 2016)

Zika virus in the Americas: Early epidemiological and genetic findings

scientific article

List of works by Marta Giovanetti

A Retrospective Overview of Zika Virus Evolution in the Midwest of Brazil

A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes

A doubt of multiple introduction of SARS-CoV-2 in Italy: A preliminary overview

A persistently replicating SARS-CoV-2 variant derived from an asymptomatic individual

A32 Genomic surveillance of Zika virus transmission in the Amazonas State, Brazil

Acute Vector-Borne Viral Infection: Zika and MinION Surveillance

Amino acid mutations in Ebola virus glycoprotein of the 2014 epidemic

An epidemiological investigation to reconstruct a probable human immunodeficiency virus-1 transmission network: a case report

Analysis of the ORFK1 hypervariable regions reveal distinct HHV-8 clustering in Kaposi's sarcoma and non-Kaposi's cases

Application of the ARIMA model on the COVID-2019 epidemic dataset

COVID-2019: The role of the nsp2 and nsp3 in its pathogenesis

Characterization of spotted fever group Rickettsiae in ticks from a city park of Rome, Italy

Chikungunya virus outbreak in the Amazon region: replacement of the Asian genotype by an ECSA lineage

Circulation of chikungunya virus East/Central/South African lineage in Rio de Janeiro, Brazil

Co-Circulation of Two Independent Clades and Persistence of CHIKV-ECSA Genotype during Epidemic Waves in Rio de Janeiro, Southeast Brazil

Correction for Giovanetti et al., "Yellow Fever Virus Reemergence and Spread in Southeast Brazil, 2016-2019"

Deep Sequencing Analysis of Human T Cell Lymphotropic Virus Type 1 Long Terminal Repeat 5' Region from Patients with Tropical Spastic Paraparesis/Human T Cell Lymphotropic Virus Type 1-Associated Myelopathy and Asymptomatic Carriers

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

Emerging of a SARS-CoV-2 viral strain with a deletion in nsp1

Epidemic establishment and cryptic transmission of Zika virus in Brazil and the Americas

Epidemiological history and phylogeography of West Nile virus lineage 2.

Erratum to: Molecular epidemiology and phylogenetic analysis of Hepatitis B virus in a group of migrants in Italy

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

Evidence for mutations in SARS-CoV-2 Italian isolates potentially affecting virus transmission

Evolution patterns of SARS-CoV-2: Snapshot on its genome variants

Evolutionary analysis of SARS-CoV-2: how mutation of Non-Structural Protein 6 (NSP6) could affect viral autophagy

Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil

Full-genome characterization of a G8P[8] rotavirus that emerged among children with diarrhea in Croatia in 2006

Genetic and Structural Data on the SARS-CoV-2 Omicron BQ.1 Variant Reveal Its Low Potential for Epidemiological Expansion

Genetic diversity in Ebola virus: Phylogenetic and in silico structural studies of Ebola viral proteins

Genetic diversity of the haemagglutinin (HA) of human influenza a (H1N1) virus in montenegro: Focus on its origin and evolution

Genetic evidence of Zika virus in mother's breast milk and body fluids of a newborn with severe congenital defects.

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes

Genomic Surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018

Genomic and Epidemiological Surveillance of Zika Virus in the Amazon Region

Genomic and epidemiological monitoring of yellow fever virus transmission potential

Genomic, epidemiological and digital surveillance of Chikungunya virus in the Brazilian Amazon

HIV rapid testing in community and outreach sites: results of a nationwide demonstration project in Italy.

HIV type 1 origin and transmission dynamics among different risk groups in sardinia: molecular epidemiology within the close boundaries of an Italian island

HIV-1 non-B subtypes in Italy: a growing trend.

HTLV-1aA introduction into Brazil and its association with the trans-Atlantic slave trade.

Hepatitis A virus in a medical setting in Madagascar: a lesson for public health

Hepatitis B virus genotype and subgenotype prevalence and distribution in Montenegro

Hepatitis E Virus Circulation in Italy: Phylogenetic and Evolutionary Analysis

Impact of spatial dispersion, evolution, and selection on Ebola Zaire Virus epidemic waves

Initial introduction and spread of the SARS‐CoV‐2 AY.4.2.1 Delta variant in Bulgaria, a genomic insight

Lipidomic Analysis Reveals Serum Alteration of Plasmalogens in Patients Infected With ZIKA Virus

MISSEL: a method to identify a large number of small species-specific genomic subsequences and its application to viruses classification.

Migration patterns of HIV-1 subtype B virus in Northern Italy.

Mobile health clinic for the medical management of clinical sequelae experienced by survivors of the 2013-2016 Ebola virus disease outbreak in Sierra Leone, West Africa

Molecular Characterization of the Human Immunodeficiency Virus Type 1 in Women and Their Vertically Infected Children

Molecular Epidemiology of HIV-1 in African Countries: A Comprehensive Overview

Molecular In-Depth on the Epidemiological Expansion of SARS-CoV-2 XBB.1.5

Molecular epidemiology and genetic diversity of human rhinovirus affecting hospitalized children in Rome

Molecular epidemiology and phylogenetic analysis of Hepatitis B virus in a group of migrants in Italy

Multi-epitope based vaccine against yellow fever virus applying immunoinformatics approaches

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples.

Natural selection versus creation: a review on the origin of SARS-COV-2 ⬇️

Neonatal surveillance for congenital Zika infection during the 2016 microcephaly outbreak in Salvador, Brazil: Zika virus detection in asymptomatic newborns

Newborns with Zika virus-associated microcephaly exhibit marked systemic inflammatory imbalance

Opsoclonus-myoclonus-ataxia syndrome associated with chikungunya and dengue virus co-infection

Origin and evolution of Nipah virus

Persistence of chikungunya ECSA genotype and local outbreak in an upper medium class neighborhood in Northeast Brazil

Phylogenesys and homology modeling in Zika virus epidemic: food for thought

Phylogenetic Analysis of Human Immunodeficiency Virus Type 2 Group B.

Phylogeny of Dengue and Chikungunya viruses in Al Hudayda governorate, Yemen

Phylogeny of Murray Valley encephalitis virus in Australia and Papua New Guinea

Pluripotency of against Arboviruses: the case of yellow fever

Potential chimeric peptides to block the SARS-CoV-2 spike receptor-binding domain

Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa

Reliable timescale inference of HBV genotype A origin and phylodynamics

Response to Carletti et al, "About the origin of the first two SARS-CoV-2 infections in Italy: Inference not supported by appropriate sequence analysis"

Response to Ribeiro da Silva et al.,"Role of Nonstructural Proteins in the Pathogenesis of SARS-CoV-2

Retrospective Investigation in Horses with Encephalitis Reveals Unnoticed Circulation of West Nile Virus in Brazil

Return of the founder Chikungunya virus to its place of introduction into Brazil is revealed by genomic characterization of exanthematic disease cases

Role of individual's T-cell immunome in controlling HIV-1 progression