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List of works by Takeshi Murata

An efficient screening method for purifying and crystallizing membrane proteins using modified clear-native PAGE.

scientific article published on 9 February 2018

Analyses based on statistical thermodynamics for large difference between thermophilic rhodopsin and xanthorhodopsin in terms of thermostability

scientific article published on 01 February 2019

Antiglycopeptide Mouse Monoclonal Antibody LpMab-21 Exerts Antitumor Activity Against Human Podoplanin Through Antibody-Dependent Cellular Cytotoxicity and Complement-Dependent Cytotoxicity.

scientific article published on February 2017

Basic properties of rotary dynamics of the molecular motor Enterococcus hirae V1-ATPase

scientific article published on 2 October 2013

Binding interactions of the peripheral stalk subunit isoforms from human V-ATPase

scientific article

Biochemical and biophysical properties of interactions between subunits of the peripheral stalk region of human V-ATPase

scientific article

Calculating the Na⁺ translocating V-ATPase catalytic site affinity for substrate binding by homology modeled NtpA monomer using molecular dynamics/free energy calculation

scientific article published on 30 March 2012

Catalytic properties of Na(+)-translocating V-ATPase in Enterococcus hirae

scientific article

Chimeric Anti-Human Podoplanin Antibody NZ-12 of Lambda Light Chain Exerts Higher Antibody-Dependent Cellular Cytotoxicity and Complement-Dependent Cytotoxicity Compared with NZ-8 of Kappa Light Chain.

scientific article published on 3 February 2017

Cloning, expression and purification of the anion exchanger 1 homologue from the basidiomycete Phanerochaete chrysosporium

scientific article published on 15 April 2011

Comparison of functional non-glycosylated GPCRs expression in Pichia pastoris

scientific article published on 22 January 2009

Crystal structure and calcium-induced conformational changes of diacylglycerol kinase α EF-hand domains

scientific article published on 04 February 2019

Crystal structure of the anion exchanger domain of human erythrocyte band 3

scientific article

Crystal structure of the central axis DF complex of the prokaryotic V-ATPase

scientific article

Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor.

scientific article

Crystal structures of the human adiponectin receptors

scientific article published on 8 April 2015

Deletion analysis of the subunit genes of V-type Na+-ATPase from Enterococcus hirae

scientific article published on 01 June 2006

Detection of Tiger Podoplanin Using the Anti-Cat Podoplanin Monoclonal Antibody PMab-52

scientific article published on 01 November 2018

Energy and information flows in biological systems: Bioenergy transduction of V1-ATPase rotary motor and dynamics of thermodynamic entropy in information flows

scientific article

Epitope Mapping of Monoclonal Antibody PMab-48 Against Dog Podoplanin

scientific article published on 2 April 2018

Evaluation of the Pichia pastoris expression system for the production of GPCRs for structural analysis

scientific article published on 22 April 2011

Expression, purification and characterization of isoforms of peripheral stalk subunits of human V-ATPase

scientific article

Fluorescence-based optimization of human bitter taste receptor expression in Saccharomyces cerevisiae

scientific article

G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody

scientific article

Generation of functional antibodies for mammalian membrane protein crystallography

scientific article published on 08 May 2013

Hot-Spot Residues to be Mutated Common in G Protein-Coupled Receptors of Class A: Identification of Thermostabilizing Mutations Followed by Determination of Three-Dimensional Structures for Two Example Receptors.

scientific article published on 23 June 2017

Identification of Thermostabilizing Mutations for Membrane Proteins: Rapid Method Based on Statistical Thermodynamics

scientific article published on 7 April 2016

Identification of nucleotide binding sites in V-type Na+-ATPase from Enterococcus hirae

scientific article published in February 2004

Identification of thermostabilizing mutations for a membrane protein whose three-dimensional structure is unknown

scientific article published on 14 November 2016

Infrared spectroscopic studies on the V-ATPase

scientific article

Interaction and stoichiometry of the peripheral stalk subunits NtpE and NtpF and the N-terminal hydrophilic domain of NtpI of Enterococcus hirae V-ATPase.

scientific article published on 6 May 2008

Ion binding and selectivity of the rotor ring of the Na+-transporting V-ATPase.

scholarly article

Ligand binding to human prostaglandin E receptor EP4 at the lipid-bilayer interface

scientific article published on 03 December 2018

Loose binding of the DF axis with the A3B3 complex stimulates the initial activity of Enterococcus hirae V1-ATPase

scientific article

Mass spectrometry of intact V-type ATPases reveals bound lipids and the effects of nucleotide binding

scientific article published on October 2011

Metastable asymmetrical structure of a shaftless V motor

scientific article published on 30 January 2019

Molecular structure and rotary dynamics of Enterococcus hirae V₁-ATPase.

scientific article

Mutagenesis of the residues forming an ion binding pocket of the NtpK subunit of Enterococcus hirae V-ATPase

scientific article published on 22 June 2012

Mutant LV(476-7)AA of A-subunit of Enterococcus hirae V1-ATPase: High affinity of A3B3 complex to DF axis and low ATPase activity

scientific article published on 27 December 2013

Off-axis rotor in Enterococcus hirae V-ATPase visualized by Zernike phase plate single-particle cryo-electron microscopy

scientific article published in Scientific Reports

Phospholipid Membrane Fluidity Alters Ligand Binding Activity of a G Protein-Coupled Receptor by Shifting the Conformational Equilibrium

scientific article published on 14 January 2019

Physical Origin of Thermostabilization by a Quadruple Mutation for the Adenosine A2a Receptor in the Active State

scientific article published on 4 April 2018

Platform for the rapid construction and evaluation of GPCRs for crystallography in Saccharomyces cerevisiae

scientific article

Purification and reconstitution of Na+-translocating vacuolar ATPase from Enterococcus hirae

scientific article published on 01 October 1997

Reconstitution in vitro of the catalytic portion (NtpA3-B3-D-G complex) of Enterococcus hirae V-type Na+-ATPase

scientific article published on 13 October 2009

Rotation Mechanism of Molecular Motor V1-ATPase Studied by Multiscale Molecular Dynamics Simulation

scientific article published in March 2017

Rotation mechanism of Enterococcus hirae V1-ATPase based on asymmetric crystal structures

scientific article

Rotational Mechanism Model of the Bacterial V Motor Based on Structural and Computational Analyses

scientific article published on 05 February 2019

Rotational mechanism of Enterococcus hirae V1-ATPase by crystal-structure and single-molecule analyses

scientific article published on 19 March 2015

Sarkosyl is a good regeneration reagent for studies on vacuolar-type ATPase subunit interactions in Biacore experiments.

scientific article

Significance of the glutamate-139 residue of the V-type Na+-ATPase NtpK subunit in catalytic turnover linked with salt tolerance of Enterococcus hirae

scientific article published on 20 May 2011

Single-molecule analysis reveals rotational substeps and chemo-mechanical coupling scheme of Enterococcus hirae V1-ATPase

scientific article published on 13 September 2019

Sodium or lithium ion-binding-induced structural changes in the K-ring of V-ATPase from Enterococcus hirae revealed by ATR-FTIR spectroscopy.

scientific article

Structural basis of biological N2O generation by bacterial nitric oxide reductase

scientific article

Structural insights into the subtype-selective antagonist binding to the M2 muscarinic receptor

scientific article published on 12 November 2018

Structure and dynamics of rotary V1 motor

scientific article published on 31 January 2018

Structure and mechanism of the mammalian fructose transporter GLUT5

scientific article

Structure and mechanism of vacuolar Na+-translocating ATPase from Enterococcus hirae

scientific article

Structure of the rotor of the V-Type Na+-ATPase from Enterococcus hirae

scientific article

Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase

scientific article

The membrane domain of the Na+-motive V-ATPase from Enterococcus hirae contains a heptameric rotor

scientific article published on 21 March 2003

X-ray Crystallographic Structure of Thermophilic Rhodopsin: IMPLICATIONS FOR HIGH THERMAL STABILITY AND OPTOGENETIC FUNCTION

scientific article

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