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List of works by Penny Nymark

A Community-Driven, Openly Accessible Molecular Pathway Integrating Knowledge on Malignant Pleural Mesothelioma

scientific article published on 26 April 2022

A data fusion pipeline for generating and enriching Adverse Outcome Pathway descriptions

scientific article published on 15 November 2017

Aberrations of chromosome 19 in asbestos-associated lung cancer and in asbestos-induced micronuclei of bronchial epithelial cells in vitro

scientific article published on 13 March 2008

Accumulation of genomic alterations in 2p16, 9q33.1 and 19p13 in lung tumours of asbestos-exposed patients

scientific article published on 7 August 2012

CDK4is a probable target gene in a novel amplicon at 12q13.3-q14.1 in lung cancer

scientific article (publication date: 12 November 2004)

COVID-19 through Adverse Outcome Pathways: Building networks to better understand the disease – 3rd CIAO AOP Design Workshop

scientific article published in January 2022

Chapter 11. Computational Modelling of Biological Responses to Engineered Nanomaterials

ELIXIR and Toxicology: a community in development

scientific article published on 3 October 2023

Enriching Nanomaterials Omics Data: An Integration Technique to Generate Biological Descriptors

scientific article published on 12 October 2017

European Registry of Materials: global, unique identifiers for (undisclosed) nanomaterials

scientific article from 2022

Extensive temporal transcriptome and microRNA analyses identify molecular mechanisms underlying mitochondrial dysfunction induced by multi-walled carbon nanotubes in human lung cells.

scientific article

FAIR assessment tools: evaluating use and performance

scientific article published in July 2022

Free radical scavenging and formation by multi-walled carbon nanotubes in cell free conditions and in human bronchial epithelial cells

scientific article

Gene expression and copy number profiling suggests the importance of allelic imbalance in 19p in asbestos-associated lung cancer

scientific article published on 12 February 2007

Gene expression profiles in asbestos-exposed epithelial and mesothelial lung cell lines

scientific article

Genotoxicity of polyvinylpyrrolidone-coated silver nanoparticles in BEAS 2B cells

scientific article

INTOXICOM Workshop Report: FAIRification of Toxicological Research Output: Leveraging ELIXIR Resources

Identification of specific gene copy number changes in asbestos-related lung cancer

scientific article published on 01 June 2006

In vitro and in vivo genotoxic effects of straight versus tangled multi-walled carbon nanotubes

scientific article published on 16 December 2015

Insights into possibilities for grouping and read-across for nanomaterials in EU chemicals legislation

scientific article published on 05 September 2018

Integrative analysis of microRNA, mRNA and aCGH data reveals asbestos- and histology-related changes in lung cancer

scientific article (publication date: 11 May 2011)

Introducing WikiPathways as a Data-Source to Support Adverse Outcome Pathways for Regulatory Risk Assessment of Chemicals and Nanomaterials

scientific article published on 21 December 2018

Introducing WikiPathways to link molecular pathways to adverse outcome pathways to support regulatory risk assessment

scientific article

Methods, models, mechanisms and metadata: Introducing the Nanotoxicology collection at F1000Research

scientific article published in 2021

Molecular alterations at 9q33.1 and polyploidy in asbestos-related lung cancer

scientific article published on 01 January 2009

Molecular and genetic changes in asbestos-related lung cancer

scientific article published on 24 March 2008

Reliable Surface Analysis Data of Nanomaterials in Support of Risk Assessment Based on Minimum Information Requirements

Toward Rigorous Materials Production: New Approach Methodologies Have Extensive Potential to Improve Current Safety Assessment Practices

scientific article published on 08 January 2020

Toward the Replacement of Animal Experiments through the Bioinformatics-driven Analysis of 'Omics' Data from Human Cell Cultures

scientific article from 2015

Towards FAIR nanosafety data

Toxic and Genomic Influences of Inhaled Nanomaterials as a Basis for Predicting Adverse Outcome.

scientific article published in April 2018

Transcriptomics in Toxicogenomics, Part I: Experimental Design, Technologies, Publicly Available Data, and Regulatory Aspects

scientific article published on 15 April 2020

Transcriptomics in Toxicogenomics, Part III: Data Modelling for Risk Assessment

scientific article published on 08 April 2020

eNanoMapper – A database and ontology framework for design and safety assessment of nanomaterials

toxFlow: a Web-Based Application for Read-Across Toxicity Prediction using Omics and Physicochemical Data.

scientific article published on 27 December 2017

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