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List of works by Rolf Boelens

1H, 13C and 15N assignment of the GNA1946 outer membrane lipoprotein from Neisseria meningitidis

scientific article published on 28 December 2010

3D DOSY-TROSY to determine the translational diffusion coefficient of large protein complexes

3D DOSY-TROSY to determine the translational diffusion coefficient of large protein complexes.

scientific article published on 8 November 2010

A NMR guided approach for CsrA-RNA crystallization

scientific article

A comprehensive framework of E2-RING E3 interactions of the human ubiquitin-proteasome system

scientific article

A model for the interaction of the G3-subdomain of Geobacillus stearothermophilus IF2 with the 30S ribosomal subunit

scientific article

A mutagenic analysis of the RNase mechanism of the bacterial Kid toxin by mass spectrometry

scientific article

A natural-product switch for a dynamic protein interface

scientific article

A novel µ-conopeptide, CnIIIC, exerts potent and preferential inhibition of NaV1.2/1.4 channels and blocks neuronal nicotinic acetylcholine receptors

scientific article

A residue-specific view of the association and dissociation pathway in protein–DNA recognition

article

Absolute MR thermometry using nanocarriers

scientific article

Altered specificity in DNA binding by the lac repressor: a mutant lac headpiece that mimics the gal repressor

scientific article published in September 2005

An altered-specificity ubiquitin-conjugating enzyme/ubiquitin-protein ligase pair

scientific article

An alternate conformation of the hyperthermostable HU protein from Thermotoga maritima has unexpectedly high flexibility.

scientific article published in April 2004

Analysis of the XPA and ssDNA-binding surfaces on the central domain of human ERCC1 reveals evidence for subfunctionalization

scientific article

Axin cancer mutants form nanoaggregates to rewire the Wnt signaling network

scientific article

Binding hotspots of BAZ2B bromodomain: Histone interaction revealed by solution NMR driven docking.

scientific article

Binding of Hydrogen-Citrate to Photoactive Yellow Protein Is Affected by the Structural Changes Related to Signaling State Formation

article

Biophysical characterization of mutants ofBacillus subtilislipase evolved for thermostability: Factors contributing to increased activity retention

scientific article

Block Copolymer Micelles with an Intermediate Star-/Flower-Like Structure Studied by1H NMR Relaxometry

Changes in dynamical behavior of the retinoid X receptor DNA-binding domain upon binding to a 14 base-pair DNA half site

scientific article published on August 2000

Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF

Combining NMR relaxation with chemical shift perturbation data to drive protein-protein docking.

scientific article

Comparative NMR study on the impact of point mutations on protein stability of Pseudomonas mendocina lipase.

scientific article published on 5 July 2006

Conformational Plasticity of the POTRA 5 Domain in the Outer Membrane Protein Assembly Factor BamA.

scientific article

Cooperative alpha-helix unfolding in a protein-DNA complex from hydrogen-deuterium exchange

scientific article published on 2 June 2006

Critical scaffolding regions of the tumor suppressor Axin1 are natively unfolded

scientific article

Crystal structure and collagen-binding site of immune inhibitory receptor LAIR-1: unexpected implications for collagen binding by platelet receptor GPVI

scientific article

Cys-Ph-TAHA: a lanthanide binding tag for RDC and PCS enhanced protein NMR.

scientific article

Data-driven docking for the study of biomolecular complexes

scientific article

Describing partially unfolded states of proteins from sparse NMR data

scientific article

Direct Use of Unassigned Resonances in NMR Structure Calculations with Proxy Residues

scientific article published in June 2006

Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives

scientific article

Dynamics and Metal Exchange Properties of C4C4 RING Domains from CNOT4 and the p44 Subunit of TFIIH

article

E. coli MG1655 modulates its phospholipid composition through the cell cycle

scientific article

E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity

scientific article

E3 ligase Rad18 promotes monoubiquitination rather than ubiquitin chain formation by E2 enzyme Rad6

scientific article

Erratum to: Impact of nucleic acid self-alignment in a strong magnetic field on the interpretation of indirect spin-spin interactions

scientific article published on 23 May 2016

Estrogen Receptor Folding Modulates cSrc Kinase SH2 Interaction via a Helical Binding Mode

scientific article published on 9 September 2015

Function and Interactions of ERCC1-XPF in DNA Damage Response

scientific article published on 05 December 2018

Glycosylation of conotoxins

scientific article published on March 2013

HADDOCK: a protein-protein docking approach based on biochemical or biophysical information

scientific article (publication date: 19 February 2003)

High-level expression of biologically active glycoprotein hormones in Pichia pastoris strains--selection of strain GS115, and not X-33, for the production of biologically active N-glycosylated 15N-labeled phCG.

scientific article

Hsp90-Tau complex reveals molecular basis for specificity in chaperone action

scientific article

Hydration dynamics of the collagen triple helix by NMR.

scientific article published in July 2000

Identification, structural and pharmacological characterization of τ-CnVA, a conopeptide that selectively interacts with somatostatin sst3 receptor

scientific article

Impact of nucleic acid self-alignment in a strong magnetic field on the interpretation of indirect spin-spin interactions.

scientific article published on 19 December 2015

In support of the BMRB.

scientific article published in September 2012

Influence of the O-phosphorylation of serine, threonine and tyrosine in proteins on the amidic ¹⁵N chemical shielding anisotropy tensors

scientific article published in December 2012

Information-driven protein-DNA docking using HADDOCK: it is a matter of flexibility

scientific article

Insight into the conformational stability of membrane-embedded BamA using a combined solution and solid-state NMR approach

scientific article

Interactions between the toxin Kid of the bacterial parD system and the antitoxins Kis and MazE.

scientific article published in April 2007

Interactions of Kid-Kis toxin-antitoxin complexes with the parD operator-promoter region of plasmid R1 are piloted by the Kis antitoxin and tuned by the stoichiometry of Kid-Kis oligomers.

scientific article published on 21 February 2007

Introduction to a special issue of <i>Magnetic Resonance</i> in honour of Robert Kaptein at the occasion of his 80th birthday

scientific article published in 2021

Lack of negative charge in the E46Q mutant of photoactive yellow protein prevents partial unfolding of the blue-shifted intermediate

scientific article

MINOES: a new approach to select a representative ensemble of structures in NMR studies of (partially) unfolded states. Application to Delta25-PYP.

scientific article

Mechanism of 3D domain swapping in bovine seminal ribonuclease

scientific article published on 01 February 2014

Model for RNA binding and the catalytic site of the RNase Kid of the bacterial parD toxin-antitoxin system.

scientific article published on 27 December 2005

Modeling Protein−Protein Complexes Involved in the CytochromecOxidase Copper-Delivery Pathway

scientific article published in April 2007

Molecular Basis of the Receptor Interactions of Polysialic Acid (polySia), polySia Mimetics, and Sulfated Polysaccharides

scientific article

Molecular organization of various collagen fragments as revealed by atomic force microscopy and diffusion-ordered NMR spectroscopy.

scientific article published on 31 July 2012

Mutations in the glucocorticoid receptor DNA-binding domain mimic an allosteric effect of DNA 1 1Edited by P. E. Wright

article published in 2000

N-terminal domain of human Hsp90 triggers binding to the cochaperone p23.

scientific article

NMR Studies on Structure and Dynamics of the Monomeric Derivative of BS-RNase: New Insights for 3D Domain Swapping

scientific article

NMR analysis of protein interactions

scientific article

NMR characterization of foldedness for the production of E3 RING domains

scientific article published on 2 August 2010

NMR resonance assignments of NarE, a putative ADP-ribosylating toxin from Neisseria meningitidis.

scientific article

New insights into the structure and composition of technical lignins: a comparative characterisation study

article

Novel strategies to overcome expression problems encountered with toxic proteins: application to the production of Lac repressor proteins for NMR studies.

scientific article

Nucleosomal DNA binding drives the recognition of H3K36-methylated nucleosomes by the PSIP1-PWWP domain

scientific article

On the role of aromatic side chains in the photoactivation of BLUF domains

scientific article published on 2 June 2007

Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain

scientific article

Proteins feel more than they see: fine-tuning of binding affinity by properties of the non-interacting surface.

scientific article published on 25 April 2014

Quantitative use of chemical shifts for the modeling of protein complexes

scientific article published on 8 July 2011

Redox-dependent control of FOXO/DAF-16 by transportin-1.

scientific article

SAMPLEX: automatic mapping of perturbed and unperturbed regions of proteins and complexes

scientific article

Sequence-specific recognition of DNA by the C-terminal domain of nucleoid-associated protein H-NS.

scientific article published on 08 September 2009

Sliding and target location of DNA-binding proteins:an NMR view of the lac repressor system

article

Solution structure of a chemosensory protein from the desert locust Schistocerca gregaria

scientific article

Solution structure of the C-terminal domain of TFIIH P44 subunit reveals a novel type of C4C4 ring domain involved in protein-protein interactions

scientific article published on 24 March 2005

Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2.

scientific article published on 4 August 2005

Solution structure of the ubiquitin-conjugating enzyme UbcH5B.

scientific article published in November 2004

Some notes on fatal acquired multiple acyl-CoA dehydrogenase deficiency (MADD) in a two-year-old warmblood stallion and European tar spot (Rhytisma acerinum)

Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes

scientific article

Structural Dynamics of Bacterial Translation Initiation Factor IF2

scientific article

Structural and biochemical characterization of NarE, an iron-containing ADP-ribosyltransferase from Neisseria meningitidis

scientific article

Structural and functional analysis of the kid toxin protein from E. coli plasmid R1

scientific article

Structural basis of nucleic acid binding byNicotiana tabacumglycine-rich RNA-binding protein: implications for its RNA chaperone function

scientific article

Structural dynamics in the activation of Epac.

scientific article published on 31 December 2007

Structural insight into the recognition of the H3K4me3 mark by the TFIID subunit TAF3.

scientific article

Structural insights into transcription complexes.

scientific article published on 06 May 2011

Structural model of the UbcH5B/CNOT4 complex revealed by combining NMR, mutagenesis, and docking approaches.

scientific article

Structural properties of the promiscuous VP16 activation domain

scientific article

Structure of the O-glycosylated conopeptide CcTx from Conus consors venom

scientific article

Structure, stability, and IgE binding of the peach allergen Peamaclein (Pru p 7).

scientific article published on September 2014

Sulforaphane inhibits pancreatic cancer through disrupting Hsp90-p50(Cdc37) complex and direct interactions with amino acids residues of Hsp90.

scientific article

Symmetry and asymmetry of the RING-RING dimer of Rad18

scientific article

Temperature dependence of the magnetic volume susceptibility of human breast fat tissue: an NMR study

scientific article published on 12 April 2011

The Cerebro-oculo-facio-skeletal Syndrome Point Mutation F231L in the ERCC1 DNA Repair Protein Causes Dissociation of the ERCC1-XPF Complex

scientific article (publication date: 17 June 2015)

The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition

scientific article

The HhH domain of the human DNA repair protein XPF forms stable homodimers

scientific article

The Solution Structure of DNA-free Pax-8 Paired Box Domain Accounts for Redox Regulation of Transcriptional Activity in the Pax Protein Family

scientific article

The basic helix-loop-helix region of the transcriptional repressor hairy and enhancer of split 1 is preorganized to bind DNA

scientific article

The intrinsically unstructured domain of PC4 modulates the activity of the structured core through inter- and intramolecular interactions

scientific journal article

The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor

scholarly article

The solution structure of a transient photoreceptor intermediate: Delta25 photoactive yellow protein

scientific article

The solution structure of the AppA BLUF domain: insight into the mechanism of light-induced signaling

scientific article published in January 2006

The structural basis of the difference in sensitivity for PNGase F in the de-N-glycosylation of the native bovine pancreatic ribonucleases B and BS.

scientific article

The structure of the XPF-ssDNA complex underscores the distinct roles of the XPF and ERCC1 helix- hairpin-helix domains in ss/ds DNA recognition

scientific article

The structure of the human ERCC1/XPF interaction domains reveals a complementary role for the two proteins in nucleotide excision repair

scientific article

Toward an integrated model of protein-DNA recognition as inferred from NMR studies on the Lac repressor system

scientific article published in August 2004

Use of very long-distance NOEs in a fully deuterated protein: an approach for rapid protein fold determination.

scientific article

VirB7 and VirB9 Interactions Are Required for the Assembly and Antibacterial Activity of a Type IV Secretion System

scientific article

WeNMR: Structural Biology on the Grid

scientific article published on 30 November 2012

X-ray absorption spectroscopic studies of zinc in the N-terminal domain of HIV-2 integrase and model compounds

scientific article

parD toxin-antitoxin system of plasmid R1--basic contributions, biotechnological applications and relationships with closely-related toxin-antitoxin systems.

scientific article

¹H, ¹³C and ¹⁵N resonance assignments of wild-type Bacillus subtilis Lipase A and its mutant evolved towards thermostability

scientific article

βTrCP interacts with the ubiquitin-dependent endocytosis motif of the GH receptor in an unconventional manner

scientific article published on July 2013

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