List of works by Kevin Eliceiri

2020 BioImage Analysis Survey: Community experiences and needs for the future

scientific article published in 2021

3-D-Printed Registration Phantom for Combined Ultrasound and Optical Imaging of Biological Tissues

scientific article published on 24 April 2020

3D collagen alignment limits protrusions to enhance breast cancer cell persistence.

scientific article

3D second harmonic generation imaging tomography by multi-view excitation.

scientific article published on 28 September 2017

3D texture analysis for classification of second harmonic generation images of human ovarian cancer

scientific article published on 21 October 2016

A bioengineered heterotypic stroma-cancer microenvironment model to study pancreatic ductal adenocarcinoma

scientific article

A call for bioimaging software usability

scientific article published on 28 June 2012

A chronic window imaging device for the investigation of in vivo peripheral nerves

scientific article published on August 2014

A microfluidic coculture and multiphoton FAD analysis assay provides insight into the influence of the bone microenvironment on prostate cancer cells

scientific article

A multiscale Mueller polarimetry module for a stereo zoom microscope

scientific article published on 20 June 2019

A nondenatured, noncrosslinked collagen matrix to deliver stem cells to the heart

scientific article

A semi-automated machine-learning based workflow for ellipsoid zone analysis in eyes with macular edema: SCORE2 pilot study

scientific article published on 30 April 2020

A shift in energy metabolism anticipates the onset of sarcopenia in rhesus monkeys

scientific article

A subset of myofibroblastic cancer-associated fibroblasts regulate collagen fiber elongation, which is prognostic in multiple cancers

scientific article published on 23 December 2015

A syringe adapter for reduced muscular strain and fatigue

scientific article published on 22 January 2020

A three-dimensional computational model of collagen network mechanics

scientific article

Abstract

Administration of Non-Torsadogenic human Ether-à-go-go-Related Gene Inhibitors Is Associated with Better Survival for High hERG-Expressing Glioblastoma Patients

scientific article

Advanced Intestinal Cancers often Maintain a Multi-Ancestral Architecture

scientific article

Advanced Materials for Neural Surface Electrodes

scientific article published on December 2014

Advanced quantitative imaging and biomechanical analyses of periosteal fibers in accelerated bone growth.

scientific article published on 6 September 2016

Aging and caloric restriction impact adipose tissue, adiponectin, and circulating lipids

scientific article

Aligned collagen is a prognostic signature for survival in human breast carcinoma

scientific article

An open source, 3D printed preclinical MRI phantom for repeated measures of contrast agents and reference standards.

scientific article published on 25 January 2018

Analysis of histology specimens using lifetime multiphoton microscopy

scientific article

Analysis of multidimensional biological image data.

scientific article

Anthocyanin Vacuolar Inclusions Form by a Microautophagy Mechanism

scientific article published on 4 September 2015

Applications of combined spectral lifetime microscopy for biology

scientific article

Applying multiphoton imaging to the study of membrane dynamics in living cells.

scientific article

Association of cellular and molecular responses in the rat mammary gland to 17β-estradiol with susceptibility to mammary cancer

scientific article

Association of collagen architecture with glioblastoma patient survival.

scientific article published on 02 September 2016

Augmentation of Chicken Thigh Model with Fluorescence Imaging Allows for Real-Time, High Fidelity Assessment in Supermicrosurgery Training

scientific article published on 30 December 2020

Autofluorescence lifetime imaging of cellular metabolism: Sensitivity toward cell density, pH, intracellular, and intercellular heterogeneity

Automated and Robust Quantification of Colocalization in Dual-Color Fluorescence Microscopy: A Nonparametric Statistical Approach

scientific article

Automated quantification of aligned collagen for human breast carcinoma prognosis

scientific article

BI-24COLLAGEN PLAYS A ROLE IN GLIOBLASTOMA TUMOR INVASION AND PATIENT SURVIVAL.

scientific article published in November 2014

Beyond the margins: real-time detection of cancer using targeted fluorophores

scientific article published on 17 January 2017

Bimolecular fluorescence complementation analysis of eukaryotic fusion products

scientific article

BioClips of symmetric and asymmetric cell division.

scientific article

Bioimage informatics for experimental biology

scientific article (publication date: 2009)

Biological imaging software tools

scientific article published on 28 June 2012

Blue Light Modulates Murine Microglial Gene Expression in the Absence of Optogenetic Protein Expression

scientific article published on 17 February 2016

CGEF-1 and CHIN-1 regulate CDC-42 activity during asymmetric division in the Caenorhabditis elegans embryo

scientific article

Calcific Aortic Valve Disease Is Associated with Layer-Specific Alterations in Collagen Architecture

scientific article

Calsyntenin-1 regulates axon branching and endosomal trafficking during sensory neuron development in vivo

scientific article

Cell death, non-invasively assessed by intrinsic fluorescence intensity of NADH, is a predictive indicator of functional differentiation of embryonic stem cells

scientific article

Challenges of conducting quantitative ultrasound with a multimodal optical imaging system

scientific article published on 10 November 2020

Changes in Cutaneous Gene Expression after Microvascular Free Tissue Transfer in Parry-Romberg Syndrome

scientific article published on 01 September 2018

Characterization of fibrillar collagens and extracellular matrix of glandular benign prostatic hyperplasia nodules

scientific article

Charcot-Marie-Tooth 2b associated Rab7 mutations cause axon growth and guidance defects during vertebrate sensory neuron development

scientific article

Chemically Derived Kirigami of WSe2

scientific article published on 22 August 2018

Citrullination regulates wound responses and tissue regeneration in zebrafish

scientific article published on 01 April 2020

Closed-Loop Optogenetic Brain Interface

scientific article

Collagen Alignment as a Predictor of Recurrence after Ductal Carcinoma In Situ

scientific article published on 15 November 2017

Collagen density promotes mammary tumor initiation and progression

scientific article

Collagen organization in relation to ductal carcinoma in situ pathology and outcomes

scientific article published on 20 October 2020

Collagen organization of renal cell carcinoma differs between low and high grade tumors

scientific article published on 23 May 2019

Collagen reorganization at the tumor-stromal interface facilitates local invasion

scientific article

Comparison of Picrosirius Red Staining With Second Harmonic Generation Imaging for the Quantification of Clinically Relevant Collagen Fiber Features in Histopathology Samples

scientific article published on 22 July 2016

Complex and Noncentrosymmetric Stacking of Layered Metal Dichalcogenide Materials Created by Screw Dislocations

scientific article published on 8 February 2017

Computational segmentation of collagen fibers from second-harmonic generation images of breast cancer

scientific article published on January 2014

Contact guidance mediated three-dimensional cell migration is regulated by Rho/ROCK-dependent matrix reorganization

scientific article

Control of 3-dimensional collagen matrix polymerization for reproducible human mammary fibroblast cell culture in microfluidic devices

scientific article published on 21 June 2009

Convolutional neural networks for whole slide image superresolution

scientific article published on 12 October 2018

Cooperativity among Rev-associated nuclear export signals regulates HIV-1 gene expression and is a determinant of virus species tropism

scientific article

Correction to: A multiscale Mueller polarimetry module for a stereo zoom microscope

scientific article published on 02 January 2020

Correction: Mechanical signals regulate and activate SNAIL1 protein to control the fibrogenic response of cancer-associated fibroblasts (doi:10.1242/jcs.180539)

scientific article published on 02 May 2019

Cortex-wide neural interfacing via transparent polymer skulls

scientific article published on 02 April 2019

Cortical granule exocytosis in C. elegans is regulated by cell cycle components including separase

scientific article published on 3 October 2007

Damage-induced reactive oxygen species regulate vimentin and dynamic collagen-based projections to mediate wound repair.

scientific article published on 16 January 2018

Dense collagen-I matrices enhance pro-tumorigenic estrogen-prolactin crosstalk in MCF-7 and T47D breast cancer cells

scientific article

Developing open-source software for bioimage analysis: opportunities and challenges

scientific article

Development of a novel linearly-filled Derenzo microPET phantom

scientific article published on 6 July 2016

Distinct Tissue Damage and Microbial Cues Drive Neutrophil and Macrophage Recruitment to Thermal Injury

scientific article published on 22 October 2020

Distinct inflammatory and wound healing responses to complex caudal fin injuries of larval zebrafish

scientific article published in July 2019

Diverse activities of viral cis-acting RNA regulatory elements revealed using multicolor, long-term, single-cell imaging

scientific article

Drosophila TRIM32 cooperates with glycolytic enzymes to promote cell growth

scientific article published on 30 March 2020

ECM-incorporated hydrogels cross-linked via native chemical ligation to engineer stem cell microenvironments

scientific article published on 20 August 2013

Elevated collagen-I augments tumor progressive signals, intravasation and metastasis of prolactin-induced estrogen receptor alpha positive mammary tumor cells

scientific article published on 19 January 2017

Endogenous Optical Signals Reveal Changes of Elastin and Collagen Organization During Differentiation of Mouse Embryonic Stem Cells

scientific article

Endogenous fluorescence signatures in living pluripotent stem cells change with loss of potency

scientific article

Engineering three-dimensional collagen matrices to provide contact guidance during 3D cell migration

scientific article published on June 2010

Enriching Islet Phospholipids With Eicosapentaenoic Acid Reduces Prostaglandin E2 Signaling and Enhances Diabetic β-Cell Function.

scientific article

Evolution of ischemia and neovascularization in a murine model of full thickness human wound healing

scientific article published on 19 July 2020

Experimental and simulation study of the wavelength dependent second harmonic generation of collagen in scattering tissues

scientific article published on April 2014

Expression of the Drosophila homeobox gene, Distal-less, supports an ancestral role in neural development

scientific article

Extraction of optical properties and prediction of light distribution in rat brain tissue

scientific article published in January 2014

FLIMJ: An open-source ImageJ toolkit for fluorescence lifetime image data analysis

scientific article published on 30 December 2020

Fabrication approaches for the creation of physical models from microscopy data

Fast localized wavefront correction using area-mapped phase-shift interferometry

scientific article published on August 2011

Fibrillar Collagen Quantification With Curvelet Transform Based Computational Methods

scientific article published on 21 April 2020

Fiji: an open-source platform for biological-image analysis

scientific article

Filamin A-beta1 integrin complex tunes epithelial cell response to matrix tension

scientific article published on 20 May 2009

Fluorescence lifetime imaging of endogenous fluorophores in histopathology sections reveals differences between normal and tumor epithelium in carcinoma in situ of the breast

scientific article published on January 2009

Fluorescence of Picrosirius Red Multiplexed With Immunohistochemistry for the Quantitative Assessment of Collagen in Tissue Sections.

scientific article published in July 2017

FunImageJ: a Lisp framework for scientific image processing

scientific article published in March 2018

GSK3β Regulates Brain Energy Metabolism.

scientific article

Goniometric measurements of thick tissue using Monte Carlo simulations to obtain the single scattering anisotropy coefficient

scientific article (publication date: November 2012)

Harnessing non-destructive 3D pathology

scientific article published in 2021

Highly aligned stromal collagen is a negative prognostic factor following pancreatic ductal adenocarcinoma resection

scientific article published on 20 October 2016

Human pancreatic stellate cells modulate 3D collagen alignment to promote the migration of pancreatic ductal adenocarcinoma cells

scientific article published on December 2016

IMAGE RECONSTRUCTION OF MULTIPHOTON MICROSCOPY DATA

scientific article

Image-inspired 3D multiphoton excited fabrication of extracellular matrix structures by modulated raster scanning

scientific article

ImageJ and CellProfiler: Complements in Open‐Source Bioimage Analysis

scientific article

ImageJ for the Next Generation of Scientific Image Data

scientific article

ImageJ-MATLAB: a bidirectional framework for scientific image analysis interoperability

scientific article

ImageJ2: ImageJ for the next generation of scientific image data

scientific article published on 29 November 2017

ImageJ: Image Analysis Interoperability for the Next Generation of Biological Image Data

scientific article

Imaging Vacuolar Anthocyanins with Fluorescence Lifetime Microscopy (FLIM)

scientific article published on 01 January 2018

Imaging cardiac extracellular matrices: a blueprint for regeneration

scientific article

Imaging the Cardiac Extracellular Matrix

scientific article published on 01 January 2018

Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software

scientific article

In Vivo Visualization of Stromal Macrophages via label-free FLIM-based metabolite imaging

scientific article published on 25 May 2016

In vivo multiphoton fluorescence lifetime imaging of protein-bound and free nicotinamide adenine dinucleotide in normal and precancerous epithelia

scientific article published on March 2007

In vivo multiphoton microscopy of NADH and FAD redox states, fluorescence lifetimes, and cellular morphology in precancerous epithelia

scholarly article

Induction of fibroblast senescence generates a non-fibrogenic myofibroblast phenotype that differentially impacts on cancer prognosis

scientific article published on 15 December 2016

Integrated studies of biology: multiplexed imaging assays from molecules to man and back

Integration of the ImageJ Ecosystem in the KNIME Analytics Platform

scientific article published on 17 March 2020

Intensity-based registration of bright-field and second-harmonic generation images of histopathology tissue sections

scientific article published on 09 December 2019

Lactation opposes pappalysin-1-driven pregnancy-associated breast cancer.

scientific article published on 7 March 2016

Large particle multiphoton flow cytometry to purify intact embryoid bodies exhibiting enhanced potential for cardiomyocyte differentiation.

scientific article published on 13 June 2013

Laser scanning confocal microscopy: history, applications, and related optical sectioning techniques

scientific article

Lineage Reprogramming of Fibroblasts into Proliferative Induced Cardiac Progenitor Cells by Defined Factors

scientific article published on 10 February 2016

Long-term Live Imaging Device for Improved Experimental Manipulation of Zebrafish Larvae

scientific article published on 27 October 2017

Lrrc10 is required for early heart development and function in zebrafish

scientific article

Machine Learning Methods for Fluorescence Lifetime Imaging (FLIM) Based Label-Free Detection of Microglia

scientific article published on 03 September 2020

Mammary epithelial-specific disruption of focal adhesion kinase retards tumor formation and metastasis in a transgenic mouse model of human breast cancer

scientific article published on 09 October 2008

Matrix metalloproteinase 9 modulates collagen matrices and wound repair

scientific article published on 26 May 2015

Mechanical signals regulate and activate SNAIL1 protein to control the fibrogenic response of cancer-associated fibroblasts

scientific article published on 12 April 2016

Meeting in the Middle: Towards Successful Multidisciplinary Bioimage Analysis Collaboration

scientific article published on 14 April 2022

Membrane dynamics during cellular wound repair

scientific article

Mesenchymal stem cell interactions with 3D ECM modules fabricated via multiphoton excited photochemistry

scientific article published on 27 August 2012

Metabolic mapping of MCF10A human breast cells via multiphoton fluorescence lifetime imaging of the coenzyme NADH.

scientific article published on October 2005

Metabolic mapping of glioblastoma stem cells reveals NADH fluxes associated with glioblastoma phenotype and survival

scientific article published on 01 March 2020

Metadata matters: access to image data in the real world

scientific article (publication date: 31 May 2010)

Methods for Quantifying Fibrillar Collagen Alignment.

scientific article

Microfluidic sorting of microtissues

scientific article published on 7 March 2012

Microglia activation visualization via fluorescence lifetime imaging microscopy of intrinsically fluorescent metabolic cofactors

scientific article published on 01 July 2020

Microstructure and resident cell-types of the feline optic nerve head resemble that of humans

scientific article published on 19 October 2020

Microtubules regulate GEF-H1 in response to extracellular matrix stiffness

scientific article

Modeling early thermal injury using an ex vivo human skin model of contact burns

scientific article published on 29 August 2020

Molecular and Functional Networks Linked to Sarcopenia Prevention by Caloric Restriction in Rhesus Monkeys

scientific article published on 22 January 2020

Molecular expressions: exploring the world of optics and microscopy. http://microscopy.fsu.edu

scientific article

Multi-functional self-fluorescent unimolecular micelles for tumor-targeted drug delivery and bioimaging

scientific article

Multi-view second-harmonic generation imaging of mouse tail tendon via reflective micro-prisms

scientific article published on July 2015

Multiphoton flow cytometry to assess intrinsic and extrinsic fluorescence in cellular aggregates: applications to stem cells

scientific article

Multiphoton microscopy and fluorescence lifetime imaging microscopy (FLIM) to monitor metastasis and the tumor microenvironment

scientific article published on 03 September 2008

Multiphoton microscopy of endogenous fluorescence differentiates normal, precancerous, and cancerous squamous epithelial tissues

scientific article

NAD(P)H fluorescence lifetime measurements in fixed biological tissues

scientific article published on 10 October 2019

NIH Image to ImageJ: 25 years of image analysis

scientific article

Neuroendocrine Tumor-Targeted Upconversion Nanoparticle-Based Micelles for Simultaneous NIR-Controlled Combination Chemotherapy and Photodynamic Therapy, and Fluorescence Imaging

scientific article

New Extensibility and Scripting Tools in the ImageJ Ecosystem

scientific article

Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis

scientific article published on 31 July 2020

Non-line-of-sight imaging using a time-gated single photon avalanche diode

scientific article published on 01 August 2015

Noninvasive sorting of stem cell aggregates based on intrinsic markers

scientific article published on 17 January 2014

Nonlinear optical imaging and spectral-lifetime computational analysis of endogenous and exogenous fluorophores in breast cancer

scientific article

Nonlinear optical imaging of cellular processes in breast cancer

scientific article

Nonlinear optical microscopy and computational analysis of intrinsic signatures in breast cancer

scientific article

Nonlinear optical microscopy and ultrasound imaging of human cervical structure

scientific article

Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy

scientific article published on 03 October 2019

Open File Formats for High Content Analysis

Open source bioimage informatics for cell biology

scientific article (publication date: November 2009)

OpenSPIM: an open-access light-sheet microscopy platform.

scientific article published on 9 June 2013

Optical fiber-based dispersion for spectral discrimination in fluorescence lifetime imaging systems

scientific article published on 01 December 2019

Optical imaging of collagen fiber damage to assess thermally injured human skin

scientific article published on 26 July 2020

Optical workstation with concurrent, independent multiphoton imaging and experimental laser microbeam capabilities

scientific article

Optimization of interstrand interactions enables burn detection with a collagen-mimetic peptide

scientific article published on 01 November 2019

Optimized temporal response in multichannel two-photon fluorescence lifetime microscopy using a photonic crystal fibre.

scientific article

OptogenSIM: a 3D Monte Carlo simulation platform for light delivery design in optogenetics

scientific article

PGC-1a integrates a metabolism and growth network linked to caloric restriction

scientific article published on 03 July 2019

Pancreatic β-Cells From Mice Offset Age-Associated Mitochondrial Deficiency With Reduced KATP Channel Activity.

scientific article published on 9 June 2016

Parallel multiphoton excited fabrication of tissue engineering scaffolds using a diffractive optical element

scientific article published on 01 February 2020

Patterned optogenetic modulation of neurovascular and metabolic signals

scientific article

Periductal stromal collagen topology of pancreatic ductal adenocarcinoma differs from that of normal and chronic pancreatitis.

scientific article published on 4 September 2015

Platform for quantitative multiscale imaging of tissue composition

scientific article published on 12 March 2020

Postpartum mammary gland involution drives progression of ductal carcinoma in situ through collagen and COX-2.

scientific article

Preparation of 3D Collagen Gels and Microchannels for the Study of 3D Interactions In Vivo.

scientific article published on 9 May 2016

Prolactin signaling through focal adhesion complexes is amplified by stiff extracellular matrices in breast cancer cells

scientific article published on 17 June 2016

PyImageJ: A library for integrating ImageJ and Python

scientific article published in 2022

Pycro-Manager: open-source software for customized and reproducible microscope control

scientific article published on 05 March 2021

Quantification of Collagen Organization after Nerve Repair.

scientific article

Quantification of collagen organization and extracellular matrix factors within the healing ligament

scientific article published on 13 September 2011

Quantification of collagen organization in histopathology samples using liquid crystal based polarization microscopy

scientific article published on 29 August 2017

Quantifying Fibrillar Collagen Organization with Curvelet Transform-Based Tools

scientific article published on 11 November 2020

Quantitating the cell: turning images into numbers with ImageJ

scientific article

Quantitative Histopathology of Stained Tissues using Color Spatial Light Interference Microscopy (cSLIM)

scientific article published on 11 October 2019

Quantitative phase imaging of stromal prognostic markers in pancreatic ductal adenocarcinoma

scientific article published on 12 February 2020

Quantitative second harmonic generation imaging of leporine, canine, and porcine vocal fold collagen

scientific article published on 09 January 2019

Radiation Promptly Alters Cancer Live Cell Metabolic Fluxes: An In Vitro Demonstration.

scientific article published on 29 April 2016

Recovery and Regrowth After Nerve Repair: A Systematic Analysis of Four Repair Techniques

scientific article published on 19 March 2020

Regional metabolic heterogeneity of the hippocampus is nonuniformly impacted by age and caloric restriction

scientific article published on 2 November 2015

Resveratrol metabolites do not elicit early pro-apoptotic mechanisms in neuroblastoma cells

scientific article

Review of quantitative multiscale imaging of breast cancer.

scientific article published on 22 January 2018

RhoA is down-regulated at cell-cell contacts via p190RhoGAP-B in response to tensional homeostasis

scientific article published on 3 April 2013

SCIFIO: an extensible framework to support scientific image formats

scientific article

SHARPIN regulates collagen architecture and ductal outgrowth in the developing mouse mammary gland.

scientific article published on 14 December 2016

SORCS1 is necessary for normal insulin secretory granule biogenesis in metabolically stressed β cells

scientific article

Scientific Community Image Forum: A discussion forum for scientific image software

scientific article published on 19 June 2019

Second-harmonic generation imaging of cancer

scientific article

Shining new light on 3D cell motility and the metastatic process

scientific article published on 08 October 2009

Simultaneous determination of the second-harmonic generation emission directionality and reduced scattering coefficient from three-dimensional imaging of thick tissues

scientific article

Simultaneous two-photon spectral and lifetime fluorescence microscopy

scientific article

Single image super-resolution for whole slide image using convolutional neural networks and self-supervised color normalization

scientific article published on 09 December 2020

Sonification of hyperspectral fluorescence microscopy datasets

scientific article (publication date: 25 October 2016)

Spatial and temporal analysis of extracellular matrix proteins in the developing murine heart: a blueprint for regeneration

scientific article published on 14 February 2013

Spatially Adaptive Colocalization Analysis in Dual-Color Fluorescence Microscopy

scientific article published on 04 April 2019

Stiff collagen matrices increase tumorigenic prolactin signaling in breast cancer cells

scientific article published on 24 March 2013

Stromal alterations in ovarian cancers via wavelength dependent Second Harmonic Generation microscopy and optical scattering.

scientific article

Structural changes in mixed Col I/Col V collagen gels probed by SHG microscopy: implications for probing stromal alterations in human breast cancer

scientific article

Student learning of early embryonic development via the utilization of research resources from the nematode Caenorhabditis elegans

scientific article

Super-resolution recurrent convolutional neural networks for learning with multi-resolution whole slide images

scientific article published on 01 December 2019

Syndecan-1 induction in lung microenvironment supports the establishment of breast tumor metastases.

scientific article published on 5 July 2018

Targeted matrisome analysis identifies thrombospondin-2 and tenascin-C in aligned collagen stroma from invasive breast carcinoma

scientific article published in Scientific Reports

The Action of Discoidin Domain Receptor 2 in Basal Tumor Cells and Stromal Cancer-Associated Fibroblasts Is Critical for Breast Cancer Metastasis.

scientific article published on 31 May 2016

The ImageJ Ecosystem: An Open and Extensible Platform for Biomedical Image Analysis

scientific article

The ImageJ Ecosystem: open-source software for image visualization, processing, and analysis

scientific article published on 09 November 2020

The ImageJ ecosystem: An open platform for biomedical image analysis

scientific article

The Kinesin Adaptor Calsyntenin-1 Organizes Microtubule Polarity and Regulates Dynamics during Sensory Axon Arbor Development

scientific article

The Presence of Cyclooxygenase 2, Tumor-Associated Macrophages, and Collagen Alignment as Prognostic Markers for Invasive Breast Carcinoma Patients.

scientific article published on 3 February 2018

The collagen receptor discoidin domain receptor 2 stabilizes SNAIL1 to facilitate breast cancer metastasis

scientific article published on 05 May 2013

The effect of micro-ECoG substrate footprint on the meningeal tissue response

scientific article

The sweet spot: FDG and other 2-carbon glucose analogs for multi-modal metabolic imaging of tumor metabolism

scientific article

Three-dimensional surface profiling and optical characterization of liquid microlens using a Shack-Hartmann wave front sensor

scientific article

Tools for visualizing multidimensional images from living specimens

scientific article (publication date: 2005)

TrackMate: An open and extensible platform for single-particle tracking

scientific article published on 3 October 2016

Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification

scientific article

Transglutaminase-2 Mediates the Biomechanical Properties of the Colorectal Cancer Tissue Microenvironment that Contribute to Disease Progression

scientific article published on 21 May 2019

Transition to invasion in breast cancer: a microfluidic in vitro model enables examination of spatial and temporal effects

scientific article

Tumor mechanics and metabolic dysfunction

scientific article

Unifying Biological Image Formats with HDF5.

scientific article

Using fluorescence lifetime microscopy to study the subcellular localization of anthocyanins.

scientific article published on 8 August 2016

Validation of an arterial constitutive model accounting for collagen content and crosslinking

scientific article published on 30 November 2015

VisBio: a computational tool for visualization of multidimensional biological image data

scientific article

Visualization approaches for multidimensional biological image data

scientific article

Visualization of morphological and molecular features associated with chronic ischemia in bioengineered human skin.

scientific article

Void spot assay procedural optimization and software for rapid and objective quantification of rodent voiding function, including overlapping urine spots

scientific article published on 04 July 2018

Wavelet compression of three-dimensional time-lapse biological image data.

scientific article

WormClassroom.org: an inquiry-rich educational web portal for research resources of Caenorhabditis elegans

scientific article (publication date: 2007)

zWEDGI: Wounding and Entrapment Device for Imaging Live Zebrafish Larvae

scientific article published on 27 September 2016

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