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List of works by Alexandre Gramfort

A Comparative Study of Algorithms for Intra- and Inter-subjects fMRI Decoding

scientific article published in 2012

A Deep Learning Architecture for Temporal Sleep Stage Classification Using Multivariate and Multimodal Time Series

scientific article published in April 2018

A Reproducible MEG/EEG Group Study With the MNE Software: Recommendations, Quality Assessments, and Good Practices

scientific article published on 06 August 2018

A hierarchical Bayesian perspective on majorization-minimization for non-convex sparse regression: application to M/EEG source imaging

scholarly article by Yousra Bekhti et al published 28 June 2018 in Inverse Problems

A large, curated, open-source stroke neuroimaging dataset to improve lesion segmentation algorithms

scientific article published in 2022

A priori par normes mixtes pour les problèmes inverses. Application à la localisation de sources en M/EEG

scientific article published on 28 February 2010

A supervised clustering approach for fMRI-based inference of brain states

scientific article published in June 2012

API design for machine learning software: experiences from the scikit-learn project ⬇️

scientific article (publication date: September 2013)

Automated model selection in covariance estimation and spatial whitening of MEG and EEG signals

scientific article published on 23 December 2014

Automated rejection and repair of bad trials in MEG/EEG

scientific article published in June 2016

Automatic semantic facilitation in anterior temporal cortex revealed through multimodal neuroimaging

scientific article published on October 2013

Autoreject: Automated artifact rejection for MEG and EEG data.

scientific article

Benchmarking solvers for TV-ℓ 1 least-squares and logistic regression in brain imaging

scientific article published in June 2014

Beyond Brain Reading: Randomized Sparsity and Clustering to Simultaneously Predict and Identify

scientific article published in 2012

Blind Denoising with Random Greedy Pursuits

scientific article published in November 2014

Brain covariance selection: better individual functional connectivity models using population prior ⬇️

Calibration of One-Class SVM for MV set estimation

scientific article published in October 2015

Caveats with Stochastic Gradient and Maximum Likelihood Based ICA for EEG

scientific article published in 2017

Challenging the estimation of cortical activity from MEG with simulated fMRI-constrained retinotopic maps

scientific article published in August 2007

Combining magnetoencephalography with magnetic resonance imaging enhances learning of surrogate-biomarkers

scientific article published on 19 May 2020

Comparison of beamformer implementations for MEG source localization

scientific article published on 08 April 2020

Data-driven HRF estimation for encoding and decoding models ⬇️

scientific article

Decoding Visual Percepts Induced by Word Reading with fMRI

scientific article published in July 2012

Decoding perceptual thresholds from MEG/EEG

scientific article published in June 2014

Deep learning-based electroencephalography analysis: a systematic review

scientific article published on 14 August 2019

Denoising and fast diffusion imaging with physically constrained sparse dictionary learning

scientific article published on 10 September 2013

DiCoDiLe: Distributed Convolutional Dictionary Learning

scientific article published on 19 November 2020

Efficient Smoothed Concomitant Lasso Estimation for High Dimensional Regression

scientific article published in October 2017

Encoding of event timing in the phase of neural oscillations

scientific article published in May 2014

FAμST: Speeding up linear transforms for tractable inverse problems

scientific article published in August 2015

Fast Optimal Transport Averaging of Neuroimaging Data

scientific article published in 2015

Faster Independent Component Analysis by Preconditioning With Hessian Approximations

scholarly article by Pierre Ablin et al published 1 August 2018 in IEEE Transactions on Signal Processing

Forward field computation with OpenMEEG

scientific article (publication date: 2011)

Functional Brain Imaging with M/EEG Using Structured Sparsity in Time-Frequency Dictionaries

scientific article published in 2011

Functional brain imaging with M/EEG using structured sparsity in time-frequency dictionaries

scientific article published in January 2011

GAP Safe Screening Rules for Sparse-Group Lasso ⬇️

scientific article published in January 2016

GAP Safe screening rules for sparse multi-task and multi-class models ⬇️

scientific article published in January 2015

Graph-based variability estimation in single-trial event-related neural responses

scientific article published on 5 February 2010

HRF Estimation Improves Sensitivity of fMRI Encoding and Decoding Models

scientific article published in June 2013

Handling correlated and repeated measurements with the smoothed multivariate square-root Lasso ⬇️

article by Quentin Bertrand et al published 2019 in Advances in Neural Information Processing Systems 32

Hyperparameter estimation in maximum a posteriori regression using group sparsity with an application to brain imaging

scientific article published in August 2017

Identifying Predictive Regions from fMRI with TV-L1 Prior

scientific article published in June 2013

Improved Brain Pattern Recovery through Ranking Approaches

scientific article published in July 2012

Improved MEG/EEG source localization with reweighted mixed-norms

scientific article published in June 2014

Improving M/EEG source localizationwith an inter-condition sparse prior

scientific article published in June 2009

International Electronic Health Record-Derived COVID-19 Clinical Course Profiles: The 4CE Consortium

scientific article published on 18 April 2020

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium

scientific article published on 19 August 2020

Intracranial Electrode Location and Analysis in MNE-Python

scientific article published on 14 February 2022

Inverse problems with time-frequency dictionaries and non-white Gaussian noise

scientific article published in August 2015

Issues and recommendations from the OHBM COBIDAS MEEG committee for reproducible EEG and MEG research

scientific article published on 21 September 2020

Large scale screening of neural signatures of consciousness in patients in a vegetative or minimally conscious state

scientific article

Learning from M/EEG data with variable brain activation delays

scientific article

Learning step sizes for unfolded sparse coding ⬇️

article by Pierre Ablin et al published 2019 in Advances in Neural Information Processing Systems 32

Learning the Morphology of Brain Signals Using Alpha-Stable Convolutional Sparse Coding ⬇️

scientific article published in January 2017

Learning to Rank from Medical Imaging Data

scholarly article by Fabian Pedregosa et al published 2012 in Lecture Notes in Computer Science

Local and long-range functional connectivity is reduced in concert in autism spectrum disorders

scientific article

Low Dimensional Representations of MEG/EEG Data Using Laplacian Eigenmaps

scientific article published in October 2007

M/EEG source localization with multi-scale time-frequency dictionaries

scientific article published in June 2016

MEG and EEG data analysis with MNE-Python

scientific article

MEG-BIDS, the brain imaging data structure extended to magnetoencephalography.

scientific article

MEG/EEG Source Imaging with a Non-Convex Penalty in the Time-Frequency Domain

scientific article published in June 2015

MEG/EEG group study with MNE: recommendations, quality assessments and best practices

scientific article published on 28 December 2017

MEG/EEG single trial source estimates based on inter-trial priors in the time-frequency domain for source connectivity analysis

article

MEG/EEG source reconstruction based on Gabor thresholding in the source space

scientific article published in May 2011

MNE software for processing MEG and EEG data

scientific article

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis

scientific article

Machine learning for neuroimaging with scikit-learn

scientific article

Manifold-regression to predict from MEG/EEG brain signals without source modeling ⬇️

Markov models for fMRI correlation structure: Is brain functional connectivity small world, or decomposable into networks?

scientific article published on 3 February 2012

Mind the Noise Covariance When Localizing Brain Sources with M/EEG

scientific article published in June 2015

Mixed-norm estimates for the M/EEG inverse problem using accelerated gradient methods

scientific article published on 16 March 2012

Modeling Shared responses in Neuroimaging Studies through MultiView ICA ⬇️

Multi-condition M/EEG Inverse Modeling with Sparsity Assumptions: How to Estimate What Is Common and What Is Specific in Multiple Experimental Conditions

scientific article published in 2010

Multi-scale Mining of fMRI Data with Hierarchical Structured Sparsity

scientific article published in May 2011

Multi-subject Dictionary Learning to Segment an Atlas of Brain Spontaneous Activity

scientific article published in 2011

Multi-subject dictionary learning to segment an atlas of brain spontaneous activity

scientific article published in January 2011

Multilayer Scattering Image Analysis Fits fMRI Activity in Visual Areas

scientific article published in July 2012

Multiscale Mining of fMRI Data with Hierarchical Structured Sparsity

scientific article published in January 2012

Multivariate Convolutional Sparse Coding for Electromagnetic Brain Signals ⬇️

Non-linear auto-regressive models for cross-frequency coupling in neural time series

scientific article published on 11 December 2017

Non-negative Tensor Factorization for single-channel EEG artifact rejection

scientific article published in September 2013

Non-negative matrix factorization for single-channel EEG artifact rejection

scientific article published in May 2013

OpenMEEG: opensource software for quasistatic bioelectromagnetics

scientific article published on 6 September 2010

Optimization of classification and regression analysis of four monoclonal antibodies from Raman spectra using collaborative machine learning approach

scientific article published on 08 March 2018

Parametric estimation of spectrum driven by an exogenous signal

scientific article published in March 2017

Phase delays within visual cortex shape the response to steady-state visual stimulation

scientific article published in February 2011

Predictive regression modeling with MEG/EEG: from source power to signals and cognitive states

scientific article published on 18 May 2020

Scikit-learn: Machine Learning in Python ⬇️

scientific article

Second Order Scattering Descriptors Predict fMRI Activity Due to Visual Textures

scientific article published in June 2013

Seeing it all: Convolutional network layers map the function of the human visual system

scientific article

Single-trial decoding of auditory novelty responses facilitates the detection of residual consciousness.

scientific article published on 13 July 2013

Sparse DSI: Learning DSI Structure for Denoising and Fast Imaging ⬇️

scientific article published on 01 January 2012

Spatiotemporal Signatures of Lexical-Semantic Prediction

scientific article published on 14 October 2014

Statistical control for spatio-temporal MEG/EEG source imaging with desparsified mutli-task Lasso ⬇️

scientific article published in November 2020

Subspecialization within default mode nodes characterized in 10,000 UK Biobank participants

article published in the Proceedings of the National Academy of Sciences of the United States of America

Supramodal processing in visual learning and plasticity

article by Nicolas Zilber et al published 16 May 2013 in Multisensory research

Supramodal processing optimizes visual perceptual learning and plasticity

scientific article

The Iterative Reweighted Mixed-Norm Estimate for Spatio-Temporal MEG/EEG Source Reconstruction. ⬇️

scientific article

The Strength of Alpha-Beta Oscillatory Coupling Predicts Motor Timing Precision

scientific article published on 21 February 2019

The Symmetric BEM: Bringing in More Variables for Better Accuracy

scientific article published in 2010

Time-frequency mixed-norm estimates: sparse M/EEG imaging with non-stationary source activations

scientific article published on 4 January 2013

Total Variation Regularization Enhances Regression-Based Brain Activity Prediction

scientific article published in August 2010

Total variation regularization for fMRI-based prediction of behavior

scientific article

Tracking cortical activity from M/EEG using graph cuts with spatiotemporal constraints ⬇️

scientific article published on October 7, 2010

Two distinct dynamic modes subtend the detection of unexpected sounds

scientific article published on 27 January 2014

Uncovering the structure of clinical EEG signals with self-supervised learning

scientific article published on 12 November 2020

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