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List of works by Marco Nardini

A bacterial acyl aminoacyl peptidase couples flexibility and stability as a result of cold adaptation.

scientific article published on 14 October 2016

A conserved loop in polynucleotide phosphorylase (PNPase) essential for both RNA and ADP/phosphate binding

scientific article published on 26 September 2013

A redox signalling globin is essential for reproduction in Caenorhabditis elegans

scientific article

Alpha/beta hydrolase fold enzymes: the family keeps growing

scientific article (publication date: December 1999)

Aminoacetone oxidase from Streptococcus oligofermentans belongs to a new three-domain family of bacterial flavoproteins

scientific article

Archaeal protoglobin structure indicates new ligand diffusion paths and modulation of haem-reactivity

scientific article

BEAMS (BEAds Modelling System): a set of computer programs for the generation, the visualization and the computation of the hydrodynamic and conformational properties of bead models of proteins

scholarly article by Bruno Spotorno et al published 13 May 1997 in European Biophysics Journal

BEAMS (BEAds Modelling System): a set of computer programs for the generation, the visualization and the computation of the hydrodynamic and conformational properties of bead models of proteins

scholarly article by Bruno Spotorno et al published 22 October 1997 in European Biophysics Journal

Bishistidyl heme hexacoordination, a key structural property in Drosophila melanogaster hemoglobin

scientific article published on 24 May 2005

CO Rebinding Kinetics and Molecular Dynamics Simulations Highlight Dynamic Regulation of Internal Cavities in Human Cytoglobin

scientific article

Characterization of human DAAO variants potentially related to an increased risk of schizophrenia.

scientific article published on 5 December 2012

Crystal Structure of the Arabidopsis thaliana L1L/NF-YC3 Histone-fold Dimer Reveals Specificities of the LEC1 Family of NF-Y Subunits in Plants

article

Crystal structure of LptH, the periplasmic component of the lipopolysaccharide transport machinery from Pseudomonas aeruginosa

scientific article

Crystal structure of pseudomonas aeruginosa lipase in the open conformation. The prototype for family I.1 of bacterial lipases

scientific article published in October 2000

Crystal structure of the glutaredoxin-like protein SH3BGRL3 at 1.6 Angstrom resolution

scientific article published in May 2004

Crystal structures of two Bacillus carboxylesterases with different enantioselectivities

scientific article

Crystallization and preliminary X-ray analysis of neural haemoglobin from the nemertean wormCerebratulus lacteus

article

Crystallization and preliminary X-ray diffraction analysis of brefeldin A-ADP ribosylated substrate (BARS).

scientific article published on 29 May 2002

CtBP/BARS: a dual-function protein involved in transcription co-repression and Golgi membrane fission

scientific article

CtBP1/BARS Gly172-->Glu mutant structure: impairing NAD(H)-binding and dimerization

scientific article

Cyclic dinucleotides bind the C-linker of HCN4 to control channel cAMP responsiveness ⬇️

scientific article

Determination of ligand pathways in globins: apolar tunnels versus polar gates

scientific article

Erratum: Cyclic dinucleotides bind the C-linker of HCN4 to control channel cAMP responsiveness

scholarly article published in Nature Chemical Biology

Ferrous Campylobacter jejuni truncated hemoglobin P displays an extremely high reactivity for cyanide - a comparative study

scientific article published on 10 January 2008

Functional and crystallographic characterization of Salmonella typhimurium Cu,Zn superoxide dismutase coded by the sodCI virulence gene

scientific article

Functional and structural roles of the N-terminal extension in Methanosarcina acetivorans protoglobin

scientific article

Fusicoccin Activates KAT1 Channels by Stabilizing Their Interaction with 14-3-3 Proteins

scientific article

Globin-like proteins in Caenorhabditis elegans: in vivo localization, ligand binding and structural properties

scientific article

Hemoprotein time-resolved X-ray crystallography.

scientific article

High Resolution Crystal Structures of the Cerebratulus lacteus Mini-Hb in the Unligated and Carbomonoxy States

scientific article

HisE11 and HisF8 provide bis-histidyl heme hexa-coordination in the globin domain of Geobacter sulfurreducens globin-coupled sensor

scientific article

Human alpha-thrombin inhibition by the active site titrant N alpha-(N,N-dimethylcarbamoyl)-alpha-azalysine p-nitrophenyl ester: a comparative kinetic and X-ray crystallographic study

scientific article

Human brain neuroglobin structure reveals a distinct mode of controlling oxygen affinity

scientific article

Human neuroglobin: crystals and preliminary X-ray diffraction analysis

scientific article published on 28 September 2002

Identification of the molecular site of ivabradine binding to HCN4 channels

scientific article (publication date: 2013)

Interactions of ataxin-3 with its molecular partners in the protein machinery that sorts protein aggregates to the aggresome

scientific article published on 28 March 2014

Ligand Migration in Methanosarcina acetivorans Protoglobin: Effects of Ligand Binding and Dimeric Assembly

scientific article published on 24 November 2011

Ligand Migration in the Apolar Tunnel of Cerebratulus lacteus Mini-Hemoglobin

scientific article

Ligation tunes protein reactivity in an ancient haemoglobin: kinetic evidence for an allosteric mechanism in Methanosarcina acetivorans protoglobin

scientific article

Mapping heme-ligand tunnels in group I truncated(2/2) hemoglobins

scientific article published in January 2008

Modulation of oxygen binding to insect hemoglobins: the structure of hemoglobin from the botfly Gasterophilus intestinalis

scientific article published on 31 October 2005

Molecular mechanism and functional role of brefeldin A-mediated ADP-ribosylation of CtBP1/BARS.

scientific article published on 28 May 2013

Nitrophorins: Lipocalin-based heme proteins transporting nitric oxide

scholarly article by Paolo Ascenzi published in January 2002

Non-covalent and covalent modifications modulate the reactivity of monomeric mammalian globins

scientific article published on 14 February 2013

One hundred years of X-ray diffraction, 50 years of structural biology

Probing the active site of the sugar isomerase domain from E. coli arabinose-5-phosphate isomerase via X-ray crystallography

scientific article

Protein fold and structure in the truncated (2/2) globin family

scientific article published on 29 April 2007

Protein structure in the truncated (2/2) hemoglobin family.

scientific article

Protoglobin: structure and ligand-binding properties

scientific article

Reductive nitrosylation of Methanosarcina acetivorans protoglobin: a comparative study

scientific article published on 19 December 2012

Remarkably similar antigen receptors among a subset of patients with chronic lymphocytic leukemia

scientific article (publication date: April 2004)

Reptile heme protein structure: X-ray crystallographic study of the aquo-met and cyano-met derivatives of the loggerhead sea turtle (Caretta caretta) myoglobin at 2.0 A resolution

scientific article

Reversible hexa- to penta-coordination of the heme Fe atom modulates ligand binding properties of neuroglobin and cytoglobin

scientific article

Role of Heme Distortion on Oxygen Affinity in Heme Proteins: The Protoglobin Case

scientific article published on 01 July 2010

Role of the C-terminal binding protein PXDLS motif binding cleft in protein interactions and transcriptional repression

scientific article

Saturn-Shaped Ice Burst Pattern and Fast Basal Binding of an Ice-Binding Protein from an Antarctic Bacterial Consortium

article published in 2018

Sequence- and Structure-Based Immunoreactive Epitope Discovery for Burkholderia pseudomallei Flagellin

scientific article published on 29 July 2015

Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination

scientific article

Specific recognition of ZNF217 and other zinc finger proteins at a surface groove of C-terminal binding proteins

scientific article

Structural Bases for the Regulation of CO Binding in the Archaeal Protoglobin from Methanosarcina acetivorans

scientific article published on 5 June 2015

Structural Basis of Inhibition of the Pioneer Transcription Factor NF-Y by Suramin

scientific article published on 29 October 2020

Structural Biology of Bacterial Haemophores

scientific article

Structural Determinants in the Group III Truncated Hemoglobin fromCampylobacter jejuni

scientific article published in Journal of Biological Chemistry

Structural bases for heme binding and diatomic ligand recognition in truncated hemoglobins

scientific article

Structural basis of phospholipase activity of Staphylococcus hyicus lipase

scientific article

Structural characterization of a group II 2/2 hemoglobin from the plant pathogen Agrobacterium tumefaciens

scientific article

Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants

scientific article published on 24 October 2020

Structural determinants for NF-Y/DNA interaction at the CCAAT box.

scientific article published on 24 September 2016

Structural flexibility of the heme cavity in the cold-adapted truncated hemoglobin from the Antarctic marine bacterium Pseudoalteromonas haloplanktis TAC125

scientific article

Structural heterogeneity and ligand gating in ferric Methanosarcina acetivorans protoglobin mutants

scientific article

Structural heterogeneity and ligand gating in ferric methanosarcina acetivorans protoglobin mutants

scientific article published in May 2011

Structural, kinetic, and pharmacodynamic mechanisms of D-amino acid oxidase inhibition by small molecules

scientific article

Structure and Haem-Distal Site Plasticity in Methanosarcina acetivorans Protoglobin

scientific article

Structure of a bacterial ice binding protein with two faces of interaction with ice

scientific article published in 2018

Structure-Function Relationships in l-Amino Acid Deaminase, a Flavoprotein Belonging to a Novel Class of Biotechnologically Relevant Enzymes

scientific article

Structure-function relationships in the growing hexa-coordinate hemoglobin sub-family

scientific article

Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016).

scientific article published on 28 September 2017

Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels

scientific article

The 109 residue nerve tissue minihemoglobin from Cerebratulus lacteus highlights striking structural plasticity of the alpha-helical globin fold

scientific article

The Apolar Channel in Cerebratulus lacteus Hemoglobin Is the Route for O2 Entry and Exit

scientific article

The C-terminal domain of the transcriptional corepressor CtBP is intrinsically unstructured

scientific article

The Escherichia coli Lpt Transenvelope Protein Complex for Lipopolysaccharide Export Is Assembled via Conserved Structurally Homologous Domains

scientific article

The N-terminal pre-A region of Mycobacterium tuberculosis 2/2HbN promotes NO-dioxygenase activity

scientific article

The diversity of 2/2 (truncated) globins

scientific article

The hemoglobins of the trematodesFasciola hepaticaandParamphistomum epiclitum: A molecular biological, physico-chemical, kinetic, and vaccination study

scientific article

The human brain hexacoordinated neuroglobin three-dimensional structure

scientific article published in January 2004

The structural bases for agonist diversity in an Arabidopsis thaliana glutamate receptor-like channel

scientific article published on 23 December 2019

The x-ray structure of epoxide hydrolase from Agrobacterium radiobacter AD1. An enzyme to detoxify harmful epoxides

scientific article

Thr-E11 regulates O2 affinity in Cerebratulus lacteus mini-hemoglobin

scientific article

Two distinct heme distal site states define Cerebratulus lacteus mini-hemoglobin oxygen affinity

scientific article published on 01 March 2006

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