List of works - Nathalie Juge

A family 11 xylanase from the pathogen Botrytis cinerea is inhibited by plant endoxylanase inhibitors XIP-I and TAXI-I

scientific article published in November 2005

Ascertaining the biochemical function of an essential pectin methylesterase in the gut microbe Bacteroides thetaiotaomicron

scientific article published on 23 October 2020

Both binding sites of the starch-binding domain of Aspergillus niger glucoamylase are essential for inducing a conformational change in amylose 1 1Edited by R. Huber

article by Thierry Giardina et al published November 2001 in Journal of Molecular Biology

Comparative characterization of complete and truncated forms of Lactobacillus amylovorus alpha-amylase and role of the C-terminal direct repeats in raw-starch binding.

scientific article

Comparison of barley malt alpha-amylase isozymes 1 and 2: construction of cDNA hybrids by in vivo recombination and their expression in yeast

scientific article published on 01 August 1993

Cross-inhibitory activity of cereal protein inhibitors against alpha-amylases and xylanases

scientific article published in August 2003

Crystal Structure of a Mucus-binding Protein Repeat Reveals an Unexpected Functional Immunoglobulin Binding Activity

scientific article

Deglycosylation by small intestinal epithelial cell beta-glucosidases is a critical step in the absorption and metabolism of dietary flavonoid glycosides in humans

scientific article

Deriving Ligand Orientation in Weak Protein-Ligand Complexes by DEEP-STD NMR Spectroscopy in the Absence of Protein Chemical-Shift Assignment.

scientific article published on 13 December 2018

Development of a novel human intestinal model to elucidate the effect of anaerobic commensals on <i>Escherichia coli</i> infection

scientific article published in 2022

Differential Epitope Mapping by STD NMR Spectroscopy To Reveal the Nature of Protein-Ligand Contacts.

scientific article published on 4 October 2017

Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation

scientific article published on 8 July 2015

Domain B protruding at the third beta strand of the alpha/beta barrel in barley alpha-amylase confers distinct isozyme-specific properties.

scientific article

Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut

scientific article published on 21 October 2019

Emergence of a subfamily of xylanase inhibitors within glycoside hydrolase family 18

scientific article published on 01 April 2005

Exploring the sequence-function space of microbial fucosidases

scientific article published in 2024

Factors affecting xylanase functionality in the degradation of arabinoxylans.

scientific article published on 05 March 2008

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

article

Fucosidases from the human gut symbiont Ruminococcus gnavus

scientific article published on 24 April 2020

Functional analysis of family GH36 α-galactosidases from Ruminococcus gnavus E1: insights into the metabolism of a plant oligosaccharide by a human gut symbiont

scientific article

Functional identification of the cDNA coding for a wheat endo-1,4-beta-D-xylanase inhibitor

scientific article published on May 2002

Functional importance of Asp37 from a family 11 xylanase in the binding to two proteinaceous xylanase inhibitors from wheat

scientific article

Genome sequence of the vertebrate gut symbiont Lactobacillus reuteri ATCC 53608.

scientific article published on 27 May 2011

High-level production of recombinant Aspergillus niger cinnamoyl esterase (FAEA) in the methylotrophic yeast Pichia pastoris.

scientific article published in July 2001

High-level production of recombinant fungal endo-beta-1,4-xylanase in the methylotrophic yeast Pichia pastoris

scientific article published on 01 June 2000

How Sweet Are Our Gut Beneficial Bacteria? A Focus on Protein Glycosylation in Lactobacillus

scientific article published on 3 January 2018

Hydrolytic fate of deoxynivalenol-3-glucoside during digestion

scientific article

Interactions defining the specificity between fungal xylanases and the xylanase-inhibiting protein XIP-I from wheat

scientific article

Introduction to the human gut microbiota

scientific article

Involvement of individual subsites and secondary substrate binding sites in multiple attack on amylose by barley alpha-amylase.

scientific article

Lactobacillus reuteri Inhibition of Enteropathogenic Escherichia coli Adherence to Human Intestinal Epithelium

scientific article published on March 2016

Lactobacillus reuteri Surface Mucus Adhesins Upregulate Inflammatory Responses Through Interactions With Innate C-Type Lectin Receptors.

scientific article published on 07 March 2017

Mechanistic Insights Into the Cross-Feeding of and on Host and Dietary Carbohydrates

scientific article published in 2018

Membrane-enclosed multienzyme (MEME) synthesis of 2,7-anhydro-sialic acid derivatives.

scientific article published on 19 August 2017

Mice deficient in intestinal γδ intraepithelial lymphocytes display an altered intestinal O-glycan profile compared with wild-type littermates.

scientific article

Mining the "glycocode"--exploring the spatial distribution of glycans in gastrointestinal mucin using force spectroscopy.

scientific article published on 14 March 2013

Molecular basis for chemoprevention by sulforaphane: a comprehensive review.

scientific article published on May 2007

Molecular basis for intestinal mucin recognition by galectin-3 and C-type lectins

scientific article published on 29 January 2018

Molecular characterization of host-specific biofilm formation in a vertebrate gut symbiont

scientific article

Molecular determinants of substrate and inhibitor specificities of the Penicillium griseofulvum family 11 xylanases.

scientific article published on 13 December 2008

Mucin glycan foraging in the human gut microbiome.

scientific article published on 19 March 2015

Mucin-lectin interactions assessed by flow cytometry.

scientific article published on 24 May 2010

Plant proteinaceous inhibitors of carbohydrate-active enzymes

article

Secretion, purification, and characterisation of barley alpha-amylase produced by heterologous gene expression in Aspergillus niger.

scientific article

Serine-Rich Repeat Protein adhesins from Lactobacillus reuteri display strain specific glycosylation profiles

scientific article published on 01 January 2019

Sialidases from gut bacteria: a mini-review

scientific article

Specific characterization of substrate and inhibitor binding sites of a glycosyl hydrolase family 11 xylanase from Aspergillus niger.

scientific article

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii.

scientific article published on 21 November 2017

Strain-specific diversity of mucus-binding proteins in the adhesion and aggregation properties of Lactobacillus reuteri.

scientific article

Structural analysis of xylanase inhibitor protein I (XIP-I), a proteinaceous xylanase inhibitor from wheat (Triticum aestivum, var. Soisson)

scientific article (publication date: June 2003)

Structural and molecular insights into novel surface-exposed mucus adhesins from Lactobacillus reuteri human strains

scientific article

Structural basis for adaptation of lactobacilli to gastrointestinal mucus

scientific article

Structural basis for the role of serine-rich repeat proteins from Lactobacillus reuteri in gut microbe-host interactions.

scientific article

Structural insights into bacterial recognition of intestinal mucins.

scientific article

Structural properties of porcine intestine acylpeptide hydrolase.

scientific article

Structure-based mutagenesis of Penicillium griseofulvum xylanase using computational design

scientific article published on 01 September 2008

Substrate (aglycone) specificity of human cytosolic beta-glucosidase

scientific article

The StcE metalloprotease of enterohaemorrhagic Escherichia coli reduces the inner mucus layer and promotes adherence to human colonic epithelium ex vivo.

scientific article published on 05 January 2017

The activity of barley alpha-amylase on starch granules is enhanced by fusion of a starch binding domain from Aspergillus niger glucoamylase

scientific article published on 19 December 2005

The crystal structure of feruloyl esterase A from Aspergillus niger suggests evolutive functional convergence in feruloyl esterase family

scientific article published in April 2004

The crystal structure of human cytosolic beta-glucosidase unravels the substrate aglycone specificity of a family 1 glycoside hydrolase

scientific article

The dual nature of the wheat xylanase protein inhibitor XIP-I: structural basis for the inhibition of family 10 and family 11 xylanases

scientific article published on 4 June 2004

The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri

scientific article

The human gut symbiont Ruminococcus gnavus shows specificity to blood group A antigen during mucin glycan foraging: Implication for niche colonisation in the gastrointestinal tract

scientific article published on 22 December 2021

The inhibition specificity of recombinant Penicillium funiculosum xylanase B towards wheat proteinaceous inhibitors.

scientific article published in September 2004

The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases

scientific article

The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract

scientific article published in December 2015

Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria

scientific article published on 15 July 2020

Understanding the structural basis for substrate and inhibitor recognition in eukaryotic GH11 xylanases

scientific article

Unravelling the specificity and mechanism of sialic acid recognition by the gut symbiont Ruminococcus gnavus.

scientific article published on 19 December 2017

Use of Atomic Force Microscopy to Study the Multi-Modular Interaction of Bacterial Adhesins to Mucins

scientific article published on 8 November 2016

Utilisation of mucin glycans by the human gut symbiont Ruminococcus gnavus is strain-dependent

scientific article

XIP-I, a xylanase inhibitor protein from wheat: a novel protein function

scientific article published on February 2004

γδ T-cell-deficient mice show alterations in mucin expression, glycosylation, and goblet cells but maintain an intact mucus layer

scientific article published on 06 February 2014

List of works by Nathalie Juge

A family 11 xylanase from the pathogen Botrytis cinerea is inhibited by plant endoxylanase inhibitors XIP-I and TAXI-I

Ascertaining the biochemical function of an essential pectin methylesterase in the gut microbe Bacteroides thetaiotaomicron

Both binding sites of the starch-binding domain of Aspergillus niger glucoamylase are essential for inducing a conformational change in amylose 1 1Edited by R. Huber

Comparative characterization of complete and truncated forms of Lactobacillus amylovorus alpha-amylase and role of the C-terminal direct repeats in raw-starch binding.

Comparison of barley malt alpha-amylase isozymes 1 and 2: construction of cDNA hybrids by in vivo recombination and their expression in yeast

Cross-inhibitory activity of cereal protein inhibitors against alpha-amylases and xylanases

Crystal Structure of a Mucus-binding Protein Repeat Reveals an Unexpected Functional Immunoglobulin Binding Activity

Deglycosylation by small intestinal epithelial cell beta-glucosidases is a critical step in the absorption and metabolism of dietary flavonoid glycosides in humans

Deriving Ligand Orientation in Weak Protein-Ligand Complexes by DEEP-STD NMR Spectroscopy in the Absence of Protein Chemical-Shift Assignment.

Development of a novel human intestinal model to elucidate the effect of anaerobic commensals on <i>Escherichia coli</i> infection

Differential Epitope Mapping by STD NMR Spectroscopy To Reveal the Nature of Protein-Ligand Contacts.

Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation

Domain B protruding at the third beta strand of the alpha/beta barrel in barley alpha-amylase confers distinct isozyme-specific properties.

Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut

Emergence of a subfamily of xylanase inhibitors within glycoside hydrolase family 18

Exploring the sequence-function space of microbial fucosidases

Factors affecting xylanase functionality in the degradation of arabinoxylans.

Formate cross-feeding and cooperative metabolic interactions revealed by transcriptomics in co-cultures of acetogenic and amylolytic human colonic bacteria

Fucosidases from the human gut symbiont Ruminococcus gnavus

Functional analysis of family GH36 α-galactosidases from Ruminococcus gnavus E1: insights into the metabolism of a plant oligosaccharide by a human gut symbiont

Functional identification of the cDNA coding for a wheat endo-1,4-beta-D-xylanase inhibitor

Functional importance of Asp37 from a family 11 xylanase in the binding to two proteinaceous xylanase inhibitors from wheat

Genome sequence of the vertebrate gut symbiont Lactobacillus reuteri ATCC 53608.

High-level production of recombinant Aspergillus niger cinnamoyl esterase (FAEA) in the methylotrophic yeast Pichia pastoris.

High-level production of recombinant fungal endo-beta-1,4-xylanase in the methylotrophic yeast Pichia pastoris

How Sweet Are Our Gut Beneficial Bacteria? A Focus on Protein Glycosylation in Lactobacillus

Hydrolytic fate of deoxynivalenol-3-glucoside during digestion

Interactions defining the specificity between fungal xylanases and the xylanase-inhibiting protein XIP-I from wheat

Introduction to the human gut microbiota

Involvement of individual subsites and secondary substrate binding sites in multiple attack on amylose by barley alpha-amylase.

Lactobacillus reuteri Inhibition of Enteropathogenic Escherichia coli Adherence to Human Intestinal Epithelium

Lactobacillus reuteri Surface Mucus Adhesins Upregulate Inflammatory Responses Through Interactions With Innate C-Type Lectin Receptors.

Mechanistic Insights Into the Cross-Feeding of and on Host and Dietary Carbohydrates

Membrane-enclosed multienzyme (MEME) synthesis of 2,7-anhydro-sialic acid derivatives.

Mice deficient in intestinal γδ intraepithelial lymphocytes display an altered intestinal O-glycan profile compared with wild-type littermates.

Mining the "glycocode"--exploring the spatial distribution of glycans in gastrointestinal mucin using force spectroscopy.

Molecular basis for chemoprevention by sulforaphane: a comprehensive review.

Molecular basis for intestinal mucin recognition by galectin-3 and C-type lectins

Molecular characterization of host-specific biofilm formation in a vertebrate gut symbiont

Molecular determinants of substrate and inhibitor specificities of the Penicillium griseofulvum family 11 xylanases.

Mucin glycan foraging in the human gut microbiome.

Mucin-lectin interactions assessed by flow cytometry.

Plant proteinaceous inhibitors of carbohydrate-active enzymes

Secretion, purification, and characterisation of barley alpha-amylase produced by heterologous gene expression in Aspergillus niger.

Serine-Rich Repeat Protein adhesins from Lactobacillus reuteri display strain specific glycosylation profiles

Sialidases from gut bacteria: a mini-review

Specific characterization of substrate and inhibitor binding sites of a glycosyl hydrolase family 11 xylanase from Aspergillus niger.

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii.

Strain-specific diversity of mucus-binding proteins in the adhesion and aggregation properties of Lactobacillus reuteri.

Structural analysis of xylanase inhibitor protein I (XIP-I), a proteinaceous xylanase inhibitor from wheat (Triticum aestivum, var. Soisson)

Structural and molecular insights into novel surface-exposed mucus adhesins from Lactobacillus reuteri human strains

Structural basis for adaptation of lactobacilli to gastrointestinal mucus

Structural basis for the role of serine-rich repeat proteins from Lactobacillus reuteri in gut microbe-host interactions.

Structural insights into bacterial recognition of intestinal mucins.

Structural properties of porcine intestine acylpeptide hydrolase.

Structure-based mutagenesis of Penicillium griseofulvum xylanase using computational design

Substrate (aglycone) specificity of human cytosolic beta-glucosidase

The StcE metalloprotease of enterohaemorrhagic Escherichia coli reduces the inner mucus layer and promotes adherence to human colonic epithelium ex vivo.

The activity of barley alpha-amylase on starch granules is enhanced by fusion of a starch binding domain from Aspergillus niger glucoamylase

The crystal structure of feruloyl esterase A from Aspergillus niger suggests evolutive functional convergence in feruloyl esterase family

The crystal structure of human cytosolic beta-glucosidase unravels the substrate aglycone specificity of a family 1 glycoside hydrolase

The dual nature of the wheat xylanase protein inhibitor XIP-I: structural basis for the inhibition of family 10 and family 11 xylanases

The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri

The human gut symbiont Ruminococcus gnavus shows specificity to blood group A antigen during mucin glycan foraging: Implication for niche colonisation in the gastrointestinal tract

The inhibition specificity of recombinant Penicillium funiculosum xylanase B towards wheat proteinaceous inhibitors.

The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases

The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract

Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria

Understanding the structural basis for substrate and inhibitor recognition in eukaryotic GH11 xylanases

Unravelling the specificity and mechanism of sialic acid recognition by the gut symbiont Ruminococcus gnavus.

Use of Atomic Force Microscopy to Study the Multi-Modular Interaction of Bacterial Adhesins to Mucins

Utilisation of mucin glycans by the human gut symbiont Ruminococcus gnavus is strain-dependent

XIP-I, a xylanase inhibitor protein from wheat: a novel protein function

γδ T-cell-deficient mice show alterations in mucin expression, glycosylation, and goblet cells but maintain an intact mucus layer