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List of works by Ulrich Zachariae

A Highly Strained Nuclear Conformation of the Exportin Cse1p Revealed by Molecular Dynamics Simulations

article

A cooperative knock-on mechanism underpins Ca2+-selective cation permeation in TRPV channels

scientific article published in 2023

A designed inhibitor of a CLC antiporter blocks function through a unique binding mode

scientific article

A molecular switch driving inactivation in the cardiac K+ channel HERG

scientific article

A role for loop G in the β1 strand in GABAA receptor activation.

scientific article

An Unusual Hydrophobic Core Confers Extreme Flexibility to HEAT Repeat Proteins

scientific article (publication date: September 2010)

An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding

scientific article published on 03 March 2021

Computational electrophysiology: the molecular dynamics of ion channel permeation and selectivity in atomistic detail

scientific article

Conserved structure and domain organization among bacterial Slc26 transporters.

scientific article published on October 2014

Crystal structure and functional mechanism of a human antimicrobial membrane channel

scientific article

Crystallographic analysis of Neisseria meningitidis PorB extracellular loops potentially implicated in TLR2 recognition

scientific article

Direct knock-on of desolvated ions governs strict ion selectivity in K+ channels

scientific article published on 20 July 2018

Effect of Protonation State on the Stability of Amyloid Oligomers Assembled from TTR(105-115).

scientific article published on 28 March 2013

Electrostatic properties of the anion selective porin Omp32 from Delftia acidovorans and of the arginine cluster of bacterial porins

scientific article

Functional dynamics in the voltage-dependent anion channel

scientific article

GPCRmd uncovers the dynamics of the 3D-GPCRome

scientific article published on 13 July 2020

High resolution crystal structures and molecular dynamics studies reveal substrate binding in the porin Omp32.

scientific article

Hydrophilic linkers and polar contacts affect aggregation of FG repeat peptides

scientific article

Identification of a cation transport pathway in Neisseria meningitidis PorB

scientific article published in May 2013

Importin-beta: structural and dynamic determinants of a molecular spring

scientific article

Improved 3D continuum calculations of ion flux through membrane channels

scientific article published on 18 July 2003

Insights into the function of ion channels by computational electrophysiology simulations

scientific article published on 10 February 2016

Insights into the ion-coupling mechanism in the MATE transporter NorM-VC.

scientific article published on 7 February 2017

Interfacial self-assembly of a bacterial hydrophobin

scientific article published on 13 April 2015

Intracellular Transfer of Na+ in an Active-State G-Protein-Coupled Receptor.

scientific article published on 6 December 2017

Ion permeation in K⁺ channels occurs by direct Coulomb knock-on.

scientific article published in October 2014

Mechanisms of anion conduction by coupled glutamate transporters

scientific article published on January 2015

Membrane potentials regulating GPCRs: insights from experiments and molecular dynamics simulations

scientific article

Merging In-Solution X-ray and Neutron Scattering Data Allows Fine Structural Analysis of Membrane–Protein Detergent Complexes

scientific article published on 03 July 2018

Modulation of the Neisseria gonorrhoeae drug efflux conduit MtrE.

scientific article published on 6 December 2017

Molecular determinants for nuclear import of influenza A PB2 by importin α isoforms 3 and 7.

scientific article published on 15 January 2015

Multistep mechanism of chloride translocation in a strongly anion-selective porin channel

scientific article published on August 2003

Position of transmembrane helix 6 determines receptor G protein coupling specificity

scientific article

Proton uptake associated with the reduction of the primary quinone Q(A) influences the binding site of the secondary quinone Q(B) in Rhodopseudomonas viridis photosynthetic reaction centers

scientific article

Publisher Correction: GPCRmd uncovers the dynamics of the 3D-GPCRome

scientific article published on 23 July 2020

Quantifying disorder through conditional entropy: an application to fluid mixing

scientific article

Quantitative structural analysis of importin-β flexibility: paradigm for solenoid protein structures

scientific article

Role of Structural Dynamics at the Receptor G Protein Interface for Signal Transduction

scientific article published on 25 November 2015

Side chain flexibilities in the human ether-a-go-go related gene potassium channel (hERG) together with matched-pair binding studies suggest a new binding mode for channel blockers.

scientific article

Structural Mechanisms of Voltage Sensing in G Protein-Coupled Receptors

scientific article published on 11 May 2016

Structural basis for cooperativity of CRM1 export complex formation

scientific article

Structural determinants and mechanism of mammalian CRM1 allostery

scientific article published on 11 July 2013

Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump.

scientific article published on 15 May 2017

Ten Years of High Resolution Structural Research on the Voltage Dependent Anion Channel (VDAC)-Recent Developments and Future Directions.

scientific article

The Bacterial Hydrophobin BslA is a Switchable Ellipsoidal Janus Nanocolloid

scientific article published on 17 September 2015

The O-GlcNAc Transferase Intellectual Disability Mutation L254F Distorts the TPR Helix.

scientific article published on 23 March 2018

The lipid environment determines the activity of the Escherichia coli ammonium transporter AmtB

The molecular mechanism of toxin-induced conformational changes in a potassium channel: relation to C-type inactivation

scientific article published in May 2008

Toward a consensus model of the HERG potassium channel

scientific article published in March 2010

Universal relaxation governs the nonequilibrium elasticity of biomolecules

scientific article published in Physical Review Letters

Vacuolar protein sorting: two different functional states of the AAA-ATPase Vps4p

scientific article

β-Barrel mobility underlies closure of the voltage-dependent anion channel

scientific article

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