List of works by Ylva Lindqvist

A flexible lid controls access to the active site in 1,3,8-trihydroxynaphthalene reductase

scientific article published on 01 January 1997

A method for processing diffraction data from twinned protein crystals and its application in the structure determination of an FAD/NADH-binding fragment of nitrate reductase

scientific article

A new kinase fold

scientific article published in March 2003

A novel protein quality control mechanism contributes to heat shock resistance of worldwide-distributed Pseudomonas aeruginosa clone C strains

scientific article published on 27 May 2015

A single mutation in the castor Delta9-18:0-desaturase changes reaction partitioning from desaturation to oxidase chemistry

scholarly article

A thiamin diphosphate binding fold revealed by comparison of the crystal structures of transketolase, pyruvate oxidase and pyruvate decarboxylase

article

Active site mutants of Escherichia coli dethiobiotin synthetase: effects of mutations on enzyme catalytic and structural properties.

scientific article

Analysis of an invariant cofactor-protein interaction in thiamin diphosphate-dependent enzymes by site-directed mutagenesis. Glutamic acid 418 in transketolase is essential for catalysis.

scientific article published on December 1994

Analysis of newly detected mutations in the MCFD2 gene giving rise to combined deficiency of coagulation factors V and VIII.

scientific article

Azide and acetate complexes plus two iron-depleted crystal structures of the di-iron enzyme delta9 stearoyl-acyl carrier protein desaturase. Implications for oxygen activation and catalytic intermediates

scientific article (publication date: 4 July 2003)

Carl-Ivar Brändén, 1934–2004

Circular permutations of natural protein sequences: structural evidence

scientific article published on June 1997

Cloning, expression, purification and crystallization of saccharopine reductase from Magnaporthe grisea

scientific article published on May 2000

Comparison of the crystal structures of L2 and L8S8 Rubisco suggests a functional role for the small subunit.

scientific article

Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography

scientific article

Conversion of a beta-ketoacyl synthase to a malonyl decarboxylase by replacement of the active-site cysteine with glutamine

scientific article published on September 1999

Corrigendum to “Dihydropyrimidine dehydrogenase: a flavoprotein with four iron–sulfur clusters” [Biochim. Biophys. Acta 1701 (2004) 61–74]

scholarly article published in BBA - Proteins and Proteomics

Crystal Structure of a Class XIB Phospholipase A2 (PLA2): RICE (ORYZA SATIVA) ISOFORM-2 PLA2 AND AN OCTANOATE COMPLEX

scientific article

Crystal structure and catalysis of the selenoprotein thioredoxin reductase 1

scientific article

Crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from Zymomonas mobilis at 1.9-A resolution

scientific article published in April 2004

Crystal structure of aclacinomycin-10-hydroxylase, a S-adenosyl-L-methionine-dependent methyltransferase homolog involved in anthracycline biosynthesis in Streptomyces purpurascens

scientific article

Crystal structure of an ATP-dependent carboxylase, dethiobiotin synthetase, at 1.65 A resolution

scientific article

Crystal structure of beta-ketoacyl-acyl carrier protein synthase II from E.coli reveals the molecular architecture of condensing enzymes

scientific article

Crystal structure of bifunctional aldos-2-ulose dehydratase/isomerase from Phanerochaete chrysosporium with the reaction intermediate ascopyrone M

scientific article

Crystal structure of delta9 stearoyl-acyl carrier protein desaturase from castor seed and its relationship to other di-iron proteins

scientific article

Crystal structure of diaminopelargonic acid synthase: evolutionary relationships between pyridoxal-5'-phosphate-dependent enzymes

scientific article

Crystal structure of dihydropyrimidine dehydrogenase, a major determinant of the pharmacokinetics of the anti-cancer drug 5-fluorouracil

scientific article

Crystal structure of nitrile hydratase reveals a novel iron centre in a novel fold

scientific article published on 15 May 1997

Crystal structure of saccharopine reductase from Magnaporthe grisea, an enzyme of the alpha-aminoadipate pathway of lysine biosynthesis

scientific article

Crystal structure of scytalone dehydratase--a disease determinant of the rice pathogen, Magnaporthe grisea

scientific article

Crystal structure of the FAD-containing fragment of corn nitrate reductase at 2.5 A resolution: relationship to other flavoprotein reductases

scientific article

Crystal structure of the LMAN1-CRD/MCFD2 transport receptor complex provides insight into combined deficiency of factor V and factor VIII

scientific article

Crystal structure of the active site of ribulose-bisphosphate carboxylase

scientific article published in Nature

Crystal structure of the carbohydrate recognition domain of p58/ERGIC-53, a protein involved in glycoprotein export from the endoplasmic reticulum

scientific article

Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism

scientific article

Crystal structure of the flavoenzyme PA4991 from Pseudomonas aeruginosa

scientific article

Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer

scientific article

Crystal structure of the reduced Schiff-base intermediate complex of transaldolase B from Escherichia coli: mechanistic implications for class I aldolases

scientific article

Crystal structure of the ternary complex of 1,3,8-trihydroxynaphthalene reductase from Magnaporthe grisea with NADPH and an active-site inhibitor

scientific article

Crystal structure of transaldolase B from Escherichia coli suggests a circular permutation of the alpha/beta barrel within the class I aldolase family

scientific article

Crystal structure of transketolase in complex with thiamine thiazolone diphosphate, an analogue of the reaction intermediate, at 2.3 Å resolution

scientific article published on 01 July 1993

Crystal structure of two quaternary complexes of dethiobiotin synthetase, enzyme-MgADP-AlF3-diaminopelargonic acid and enzyme-MgADP-dethiobiotin-phosphate; implications for catalysis

scientific article published on December 1998

Crystal structures of rat acid phosphatase complexed with the transition-state analogs vanadate and molybdate. Implications for the reaction mechanism

scientific article

Crystallization and Preliminary X-ray Analysis of Phenol Hydroxylase from Trichosporon cutaneum

Crystallization and preliminary X-ray crystallographic analysis of recombinant transaldolase B from Eschericha coli.

scientific article

Crystallization and preliminary X-ray crystallographic studies of recombinant thermoresistant gluconate kinase GntK from Escherichia coli

scientific article published on 23 July 2001

Crystallization and preliminary X-ray diffraction study of 1,3,8-trihydroxynaphthalene reductase fromMagnaporthe grisea

scientific article published in April 1996

Crystallization and preliminary X-ray study of pig liver dihydropyrimidine dehydrogenase.

scientific article

Crystallization and preliminary crystallographic analysis of formyl-CoA tranferase fromOxalobacter formigenes

scientific article published on 27 June 2003

Crystallization and preliminary crystallographic studies of the FAD domain of corn NADH: Nitrate reductase

scientific article published on 01 March 1992

Crystallization and structure of a recombinant ribulose-1,5-bisphosphate carboxylase

Crystallographic refinement and structure of ribulose-1,5-bisphosphate carboxylase from Rhodospirillum rubrum at 1.7 A resolution

scientific article

Crystallographic snapshots of oxalyl-CoA decarboxylase give insights into catalysis by nonoxidative ThDP-dependent decarboxylases

scientific article

Crystallography and mutagenesis of transketolase: mechanistic implications for enzymatic thiamin catalysis

scientific article published in June 1998

Desaturases: emerging models for understanding functional diversification of diiron-containing enzymes

scientific article published on 10 April 2009

Detection and characterization of merohedral twinning in crystals of oxalyl-coenzyme A decarboxylase from Oxalobacter formigenes

scientific article

Differential substrate specificity and kinetic behavior of Escherichia coli YfdW and Oxalobacter formigenes formyl coenzyme A transferase

scientific article

Dihydropyrimidine dehydrogenase: a flavoprotein with four iron-sulfur clusters

scientific article published in September 2004

Discovery of an Allosteric Inhibitor Binding Site in 3-Oxo-acyl-ACP Reductase from Pseudomonas aeruginosa

scientific article

Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway

scientific article (publication date: 10 May 2016)

Electrostatic fields at the active site of ribulose-1,5-bisphosphate carboxylase

scientific article published in February 1992

Enzymes — the movers and shakers of biology

article

Examination of substrate binding in thiamin diphosphate-dependent transketolase by protein crystallography and site-directed mutagenesis

scientific article

Expression, purification, refolding and crystallization of the carbohydrate-recognition domain of p58/ERGIC-53, an animal C-type lectin involved in export of glycoproteins from the endoplasmic reticulum.

scientific article published on 21 February 2002

Formyl-CoA transferase encloses the CoA binding site at the interface of an interlocked dimer

scientific article

Going through the motions; lessons from haemoglobin, hard work driven by ATP, dealing with ammonia and frustrations in drug discovery

article

Half-of-the-Sites Reactivity of the Castor Δ9-18:0-Acyl Carrier Protein Desaturase

article published in 2015

High-level expression, purification, and crystallization of recombinant spinach glycolate oxidase in Escherichia coli.

scientific article

High-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH

scientific article published in June 1999

High-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH

scientific article

His103 in yeast transketolase is required for substrate recognition and catalysis.

scientific article published in November 1995

Identification of catalytically important residues in yeast transketolase

scientific article

Insights into the mechanism of dihydropyrimidine dehydrogenase from site-directed mutagenesis targeting the active site loop and redox cofactor coordination

scientific article published on 8 September 2010

Insulin-like growth factor II in the mink (Mustela vison): determination of a cDNA nucleotide sequence and developmental regulation of its expression

scientific article published in May 1993

Involvement of Tyr24 and Trp108 in Substrate Binding and Substrate Specificity of Glycolate Oxidase

scholarly article by Kaj Stenberg published in March 1995

Involvement of Tyr24 and Trp108 in substrate binding and substrate specificity of glycolate oxidase

scientific article

Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes

scientific article

Mechanism of an ATP-dependent carboxylase, dethiobiotin synthetase, based on crystallographic studies of complexes with substrates and a reaction intermediate

scientific article

Murine class I major histocompatibility complex H–2Dd: expression, refolding and crystallization

article

New insights into multiple coagulation factor deficiency from the solution structure of human MCFD2

scientific article

Novel disease-causing mutations in the dihydropyrimidine dehydrogenase gene interpreted by analysis of the three-dimensional protein structure

scientific article

NrdH-redoxin of Corynebacterium ammoniagenes forms a domain-swapped dimer

scientific article

Phosphatase and oxygen radical-generating activities of mammalian purple acid phosphatase are functionally independent

scientific journal article

Preliminary crystallographic data for glycolate oxidase from spinach

scientific article published on August 1979

Preliminary crystallographic data for stearoyl-acyl carrier protein desaturase from castor seed

scientific article

Preliminary crystallographic data for transketolase from yeast.

scientific article

Primary structure of glycolate oxidase from spinach

scientific article published in 1988

Primary structure of glycolate oxidase from spinach

scientific article published on 01 May 1988

Protein engineering of Rubisco

scientific article published on December 1991

Protein-biotin interactions

scientific article published on December 1996

Purification and preliminary X-ray crystallographic studies of recombinant 7,8-diaminopelargonic acid synthase from Escherichia coli

scientific article published on 01 November 1998

Purification and preliminary X-ray crystallographic studies of recombinant L-ribulose-5-phosphate 4-epimerase from Escherichia coli

scientific article

RUBISCO: structure and mechanism

scientific article published in January 1992

Rat acid phosphatase: overexpression of active, secreted enzyme by recombinant baculovirus-infected insect cells, molecular properties, and crystallization

scientific article

Re-engineering ketoacyl synthase specificity

scientific article published on June 2000

Redesign of soluble fatty acid desaturases from plants for altered substrate specificity and double bond position

scientific article published on May 1997

Refined structure of spinach glycolate oxidase at 2 A resolution

scientific article

Refined structure of transketolase from Saccharomyces cerevisiae at 2.0 A resolution

scientific article

Reinvestigation of the catalytic mechanism of formyl-CoA transferase, a class III CoA-transferase

scientific article

Remote control of regioselectivity in acyl-acyl carrier protein-desaturases

scientific article

Role of tyrosine 129 in the active site of spinach glycolate oxidase

scientific article published on 01 May 1993

Saccharomyces cerevisiae phospholipid:diacylglycerol acyl transferase (PDAT) devoid of its membrane anchor region is a soluble and active enzyme retaining its substrate specificities.

scientific article published on 17 November 2007

Siroheme- and [Fe4-S4]-dependent NirA from Mycobacterium tuberculosis is a sulfite reductase with a covalent Cys-Tyr bond in the active site

scientific journal article

Site-directed mutagenesis of prostatic acid phosphatase. Catalytically important aspartic acid 258, substrate specificity, and oligomerization

scientific journal article

Snapshot of a phosphorylated substrate intermediate by kinetic crystallography

scientific article

Spinach glycolate oxidase and yeast flavocytochrome b2 are structurally homologous and evolutionarily related enzymes with distinctly different function and flavin mononucleotide binding

scientific article published in Journal of Biological Chemistry

Structural and Functional Aspects of Rubisco

Structural and evolutionary aspects of the key enzymes in photorespiration; RuBisCO and glycolate oxidase

scientific article published on 01 January 1987

Structural basis for activation of the thiamin diphosphate-dependent enzyme oxalyl-CoA decarboxylase by adenosine diphosphate.

scientific article

Structural basis for substrate recognition and specificity in aklavinone-11-hydroxylase from rhodomycin biosynthesis

scientific article

Structural basis for the thioredoxin-like activity profile of the glutaredoxin-like NrdH-redoxin from Escherichia coli

scientific article

Structural enzymology of biotin biosynthesis

scientific article

Structural studies on corn nitrate reductase: refined structure of the cytochrome b reductase fragment at 2.5 A, its ADP complex and an active-site mutant and modeling of the cytochrome b domain

scientific article

Structure of ATP-dependent carboxylase, dethiobiotin synthase

scientific article published on January 1997

Structure of LdtMt2, anL,D-transpeptidase fromMycobacterium tuberculosis

scientific article

Structure of dethiobiotin synthetase at 0.97 A resolution

scientific article

Structure of dethiobiotin synthetase at 0.97 Å resolution

Structure of glycolate oxidase from spinach

scientific article

Structure of glycolate oxidase from spinach at a resolution of 5.5 Å

scientific article published on 01 October 1980

Structure of human glycolate oxidase in complex with the inhibitor 4-carboxy-5-[(4-chlorophenyl)sulfanyl]-1,2,3-thiadiazole

scientific article

Structure of human pro-matrix metalloproteinase-2: activation mechanism revealed

scientific article

Structure of the complex between the antibiotic cerulenin and its target, beta-ketoacyl-acyl carrier protein synthase

scientific article

Structure-Function Studies on Desaturases and Related Hydrocarbon Hydroxylases

Studies of the mechanism of phenol hydroxylase: effect of mutation of proline 364 to serine

scientific article published in November 2002

Ta6Br14 is a useful cluster compound for isomorphous replacement in protein crystallography

scientific article published in March 1994

Tartrate-resistant bone acid phosphatase: large-scale production and purification of the recombinant enzyme, characterization, and crystallization

scientific article published on March 1999

The EAL-like protein STM1697 regulates virulence phenotypes, motility and biofilm formation in Salmonella typhimurium

scientific article published on 8 November 2013

The active site of spinach glycolate oxidase

scientific article

The conserved Trp114 residue of thioredoxin reductase 1 has a redox sensor-like function triggering oligomerization and crosslinking upon oxidative stress related to cell death

scientific article published on 22 January 2015

The crystal structure of H-2Dd MHC class I complexed with the HIV-1-derived peptide P18-I10 at 2.4 A resolution: implications for T cell and NK cell recognition

scientific article

The crystal structure of beta-ketoacyl-acyl carrier protein synthase II from Synechocystis sp. at 1.54 A resolution and its relationship to other condensing enzymes

scientific article

The crystal structure of phenol hydroxylase in complex with FAD and phenol provides evidence for a concerted conformational change in the enzyme and its cofactor during catalysis

scientific article

The crystal structure of the carbohydrate-recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals an unpredicted metal-binding site and conformational changes associated with calcium ion binding

scientific article

The crystal structure of the ivy Delta4-16:0-ACP desaturase reveals structural details of the oxidized active site and potential determinants of regioselectivity

scientific article

The design and synthesis of inhibitors of dethiobiotin synthetase as potential herbicides

scientific article published in March 1999

The enzymes of oxalate metabolism: unexpected structures and mechanisms

scientific article

The manifold of vitamin B6 dependent enzymes.

scientific article

Three-Dimensional Structure of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase from Rhodospirillum Rubrum

Three-dimensional structure of a mammalian purple acid phosphatase at 2.2 A resolution with a mu-(hydr)oxo bridged di-iron center

scientific article

Three-dimensional structure of a mammalian thioredoxin reductase: implications for mechanism and evolution of a selenocysteine-dependent enzyme

scientific article

Three-dimensional structure of apotransketolase flexible loops at the active site enable cofactor binding

scientific article published on 01 November 1992

Three-dimensional structure of human tissue inhibitor of metalloproteinases-2 at 2.1 A resolution

scientific article

Three-dimensional structure of rat acid phosphatase

scientific article

Three-dimensional structure of rat acid phosphatase in complex with L(+)-tartrate

scientific article

Three-dimensional structure of ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum at 2.9 A resolution

scientific article

Three-dimensional structure of transketolase, a thiamine diphosphate dependent enzyme, at 2.5 A resolution.

scientific article published on July 1992

Three-dimensional structures of glycolate oxidase with bound active-site inhibitors

scientific article

Transketolase from Leishmania mexicana has a dual subcellular localization

scientific article published on September 2004

Trihydroxynaphthalene reductase from Magnaporthe grisea: realization of an active center inhibitor and elucidation of the kinetic mechanism

scientific article

Two independent biological functions for type 5 tartrate-resistant acid phosphatase: protein tyrosine phosphatase and generation of reactive oxygen species

X-ray Studies on Glycolate Oxidase from Spinach

Yeast TKL1 gene encodes a transketolase that is required for efficient glycolysis and biosynthesis of aromatic amino acids.

scientific article

Δ9Stearoyl-Acyl Carrier Protein Desaturase

Δ⁹ Stearoyl-Acyl Carrier Protein Desaturase