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List of works by Sante Gnerre

A direct characterization of human mutation based on microsatellites

scientific article (publication date: October 2012)

A high-resolution map of human evolutionary constraint using 29 mammals

scientific article

ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads

scientific article published on October 2009

ARACHNE: a whole-genome shotgun assembler

scientific article

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

scientific article published in June 2007

Analysis of chimpanzee history based on genome sequence alignments

scientific article published in April 2008

Assemblathon 1: a competitive assessment of de novo short read assembly methods

scientific article

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

scientific article

Assisted assembly: how to improve a de novo genome assembly by using related species

scientific article (publication date: 2009)

Closing gaps in the human genome using sequencing by synthesis

scientific article published on 02 June 2009

DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage

scientific article

De novo assembly of highly diverse viral populations

scientific article

Development and validation of an ultra-deep next-generation sequencing assay for testing of plasma cell-free DNA from patients with advanced cancer

scientific article

Evolution of genes and genomes on the Drosophila phylogeny

scientific article

Finished bacterial genomes from shotgun sequence data

scientific article

Genetic evidence for complex speciation of humans and chimpanzees

scientific article

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

scientific article

Genome sequence, comparative analysis and haplotype structure of the domestic dog

scientific article

Gibbon genome and the fast karyotype evolution of small apes

scientific article

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

scientific article published in June 2007

Initial sequence and comparative analysis of the cat genome

scientific article

Initial sequencing and comparative analysis of the mouse genome

scientific article

The African coelacanth genome provides insights into tetrapod evolution

scientific article

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization

scientific article

The genome sequence of the filamentous fungus Neurospora crassa

scientific article

The genomic substrate for adaptive radiation in African cichlid fish

scientific article

Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection

scientific article published on 8 March 2012

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

scientific article

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