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List of works by David H. O’Connor

A Multicomponent Animal Virus Isolated from Mosquitoes

scientific article

A dominant role for CD8+-T-lymphocyte selection in simian immunodeficiency virus sequence variation

scientific article published on December 2004

A novel SIV gag-specific CD4(+)T-cell clone suppresses SIVmac239 replication in CD4(+)T cells revealing the interplay between antiviral effector cells and their infected targets

scientific article published on 24 March 2016

A novel hepacivirus with an unusually long and intrinsically disordered NS5A protein in a wild Old World primate

scientific article published on 05 June 2013

A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class I genotyping

scientific article

A rhesus macaque model of Asian-lineage Zika virus infection

scientific article

Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks

scientific article published on 23 August 2021

Acute phase CD8+ T lymphocytes against alternate reading frame epitopes select for rapid viral escape during SIV infection

scientific article

Acute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeficiency virus infection

scientific article published in May 2002

Adoptive transfer of lymphocytes isolated from simian immunodeficiency virus SIVmac239Δnef-vaccinated macaques does not affect acute-phase viral loads but may reduce chronic-phase viral loads in major histocompatibility complex-matched recipients

scientific article published on 24 April 2013

Allogeneic lymphocytes persist and traffic in feral MHC-matched mauritian cynomolgus macaques

scientific article

An MHC-Defined Primate Model Reveals Significant Rejection of Bone Marrow After Mixed Chimerism Induction Despite Full MHC Matching ⬇️

scientific article published on September 17, 2010

An open science resource for establishing reliability and reproducibility in functional connectomics

scientific article

Analysis of hepatitis C virus intrahost diversity across the coding region by ultradeep pyrosequencing

scientific article published on 25 January 2012

Analysis of pigtail macaque major histocompatibility complex class I molecules presenting immunodominant simian immunodeficiency virus epitopes

scientific article published on January 2005

Analysis of the immune response and viral evolution during the acute phase of SIV infection

scientific article published on 01 May 2002

Antibody responses to Zika virus protein in pregnant and non-pregnant macaques

article

Antibody responses to Zika virus proteins in pregnant and non-pregnant macaques

article

Arteriviruses, Pegiviruses, and Lentiviruses Are Common among Wild African Monkeys

scientific article published on 11 May 2016

Attenuation of simian immunodeficiency virus SIVmac239 infection by prophylactic immunization with dna and recombinant adenoviral vaccine vectors expressing Gag

scientific article

Biochar application for the remediation of heavy metal polluted land: A review of in situ field trials

scientific article published on 19 November 2017

Biological and Structural Characterization of a Host-Adapting Amino Acid in Influenza Virus

scientific article

Brainhack: a collaborative workshop for the open neuroscience community

scientific article

Characteristic and quantifiable COVID-19-like abnormalities in CT- and PET/CT-imaged lungs of SARS-CoV-2-infected crab-eating macaques (Macaca fascicularis)

scientific article published on 15 May 2020

Characterization of 100 extended major histocompatibility complex haplotypes in Indonesian cynomolgus macaques

scientific article published on 29 February 2020

Characterization of 47 MHC class I sequences in Filipino cynomolgus macaques

scientific article (publication date: March 2009)

Characterization of Mauritian Cynomolgus Macaque FcγR Alleles Using Long-Read Sequencing

scientific article published on 10 December 2018

Characterization of Mauritian cynomolgus macaque major histocompatibility complex class I haplotypes by high-resolution pyrosequencing

scientific article

Characterization of full-length MHC class II sequences in Indonesian and Vietnamese cynomolgus macaques ⬇️

scientific article published on May 26, 2011

Characterization of killer immunoglobulin-like receptor genetics and comprehensive genotyping by pyrosequencing in rhesus macaques

scientific article

Chloroquine, an Endocytosis Blocking Agent, Inhibits Zika Virus Infection in Different Cell Models

scientific article

Clinical Characterization of Host Response to Simian Hemorrhagic Fever Virus Infection in Permissive and Refractory Hosts: A Model for Determining Mechanisms of VHF Pathogenesis

scientific article published in 2019

Co-infection and cross-species transmission of divergent Hepatocystis lineages in a wild African primate community

scientific article published on 19 April 2013

Comparative characterization of transfection- and infection-derived simian immunodeficiency virus challenge stocks for in vivo nonhuman primate studies

scientific article published on 13 February 2013

Comparative study of Tat vaccine regimens in Mauritian cynomolgus and Indian rhesus macaques: influence of Mauritian MHC haplotypes on susceptibility/resistance to SHIV(89.6P) infection

scientific article published on 30 April 2008

Complete characterization of killer Ig-like receptor (KIR) haplotypes in Mauritian cynomolgus macaques: novel insights into nonhuman primate KIR gene content and organization

scientific article

Comprehensive characterization of MHC class II haplotypes in Mauritian cynomolgus macaques

scientific article

Conditional CD8+ T cell escape during acute simian immunodeficiency virus infection

scientific article published on 19 October 2011

Consequences of cytotoxic T-lymphocyte escape: common escape mutations in simian immunodeficiency virus are poorly recognized in naive hosts

scientific article

Consistent ultra-long DNA sequencing with automated slow pipetting

scientific article published on 12 March 2021

Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus

scientific article published on 01 May 2022

Contributions of direct and indirect alloresponses to chronic rejection of kidney allografts in nonhuman primates

scientific article published on 28 September 2011

Control of simian immunodeficiency virus SIVmac239 is not predicted by inheritance of Mamu-B*17-containing haplotypes

scientific article published on November 2006

Cost-effective sequence-based nonhuman primate MHC class I genotyping from RNA

scientific article published on 13 May 2009

Cross-clade simultaneous HIV drug resistance genotyping for reverse transcriptase, protease, and integrase inhibitor mutations by Illumina MiSeq

scientific article

Crystal Structure of Y34F Mutant Human Mitochondrial Manganese Superoxide Dismutase and the Functional Role of Tyrosine 34, ⬇️

scientific article published on April 7, 1998

Cytotoxic T lymphocyte-based control of simian immunodeficiency virus replication in a preclinical AIDS vaccine trial

scientific article

Cytotoxic T-lymphocyte escape does not always explain the transient control of simian immunodeficiency virus SIVmac239 viremia in adenovirus-boosted and DNA-primed Mamu-A*01-positive rhesus macaques

scientific article

Cytotoxic T-lymphocyte escape monitoring in simian immunodeficiency virus vaccine challenge studies

scientific article published in September 2002

Deep sequencing identifies two genotypes and high viral genetic diversity of human pegivirus (GB virus C) in rural Ugandan patients

scientific article published on 28 September 2013

Definition of five new simian immunodeficiency virus cytotoxic T-lymphocyte epitopes and their restricting major histocompatibility complex class I molecules: evidence for an influence on disease progression.

scientific article published in August 2000

Definitive Hosts of Versteria Tapeworms (Cestoda: Taeniidae) Causing Fatal Infection in North America

scientific article published on April 2016

Determining the source of transmission of SARS-CoV-2 infection in a healthcare worker

scientific article published on 01 May 2020

Differences between T cell epitopes recognized after immunization and after infection

scientific article published on October 2002

Differential MHC class I expression in distinct leukocyte subsets

scientific article

Direct identification of an HPV-16 tumor antigen from cervical cancer biopsy specimens

scientific article published on 13 December 2011

Discovery and characterization of distinct simian pegiviruses in three wild African Old World monkey species

scientific article

Discovery and full genome characterization of a new SIV lineage infecting red-tailed guenons (Cercopithecus ascanius schmidti) in Kibale National Park, Uganda

scientific article published on 4 July 2014

Discovery and full genome characterization of two highly divergent simian immunodeficiency viruses infecting black-and-white colobus monkeys (Colobus guereza) in Kibale National Park, Uganda

scientific article (publication date: 21 October 2013)

Discovery of Lanama Virus, a Distinct Member of Species <i>Kunsagivirus C</i> (<i>Picornavirales</i>: <i>Picornaviridae</i>), in Wild Vervet Monkeys (<i>Chlorocebus pygerythrus</i>)

scientific article published on 14 December 2020

Discovery of a Novel Simian Pegivirus in Common Marmosets (Callithrix jacchus) with Lymphocytic Enterocolitis

scientific article published on 30 September 2020

Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA

scientific article published on 10 July 2020

Divergent Simian Arteriviruses Cause Simian Hemorrhagic Fever of Differing Severities in Macaques

scientific article published on January 2015

Diversification of Bw4 Specificity and Recognition of a Nonclassical MHC Class I Molecule Implicated in Maternal-Fetal Tolerance by Killer Cell Ig-like Receptors of the Rhesus Macaque

scientific article published on 19 September 2018

Diversity of Influenza A(H5N1) Viruses in Infected Humans, Northern Vietnam, 2004-2010.

scientific article published in July 2018

Domestication of the donkey: timing, processes, and indicators

scientific article (publication date: 11 March 2008)

Durable sequence stability and bone marrow tropism in a macaque model of human pegivirus infection

scientific article

Dynamics of haplotype frequency change in a CD8+TL epitope of simian immunodeficiency virus

scientific article

Effects of cytotoxic T lymphocytes (CTL) directed against a single simian immunodeficiency virus (SIV) Gag CTL epitope on the course of SIVmac239 infection

scientific article

Efficacy of multivalent adenovirus-based vaccine against simian immunodeficiency virus challenge

scientific article

Elite Control, Gut CD4 T Cell Sparing, and Enhanced Mucosal T Cell Responses in Macaca nemestrina Infected by a Simian Immunodeficiency Virus Lacking a gp41 Trafficking Motif

scientific article

Environmental and socio-economic sustainability appraisal of contaminated land remediation strategies: A case study at a mega-site in China.

scientific article published on 11 August 2017

Erratum: addendum: HIV-1 superinfection despite broad CD8+ T-cell responses containing replication of the primary virus

scientific article published in Nature

Escape from CD8(+) T cell responses in Mamu-B*00801(+) macaques differentiates progressors from elite controllers

scientific article published on 02 March 2012

Escape in one of two cytotoxic T-lymphocyte epitopes bound by a high-frequency major histocompatibility complex class I molecule, Mamu-A*02: a paradigm for virus evolution and persistence?

scientific article

Ex vivo SIV-specific CD8 T cell responses in heterozygous animals are primarily directed against peptides presented by a single MHC haplotype

scientific article

Exceptional simian hemorrhagic fever virus diversity in a wild African primate community

scientific article

Expansion of Simian Immunodeficiency Virus (SIV)-Specific CD8 T Cell Lines from SIV-Naive Mauritian Cynomolgus Macaques for Adoptive Transfer

scientific article published on 15 July 2015

Extraepitopic compensatory substitutions partially restore fitness to simian immunodeficiency virus variants that escape from an immunodominant cytotoxic-T-lymphocyte response

scientific article published on March 2004

Extralymphoid CD8+ T cells resident in tissue from simian immunodeficiency virus SIVmac239{Delta}nef-vaccinated macaques suppress SIVmac239 replication ex vivo

scientific article published on 20 January 2010

Fatal metacestode infection in Bornean orangutan caused by unknown Versteria species

scientific article published on January 2014

Fetal loss in pregnant rhesus macaques infected with high-dose African-lineage Zika virus

scientific article published in 2022

Forging Collaborative Relationships in Brazil: From AIDS to ZIKV

scientific article

Full-length novel MHC class I allele discovery by next-generation sequencing: two platforms are better than one

scientific article

Functional Interactions of Common Allotypes of Rhesus Macaque FcγR2A and FcγR3A with Human and Macaque IgG Subclasses

scientific article published on 18 November 2020

GB virus C coinfections in west African Ebola patients

scientific article

GagCM9-specific CD8+ T cells expressing limited public TCR clonotypes do not suppress SIV replication in vivo

scientific article published in 2011

Genetic diversity of 1,845 rhesus macaques improves genetic variation interpretation and identifies disease models

scientific article published in 2024

Genome Sequence of Bivens Arm Virus, a Tibrovirus Belonging to the Species Tibrogargan virus (Mononegavirales: Rhabdoviridae)

scientific article

Genome Sequence of a Novel Kunsagivirus (Picornaviridae: Kunsagivirus) from a Wild Baboon (Papio cynocephalus).

scientific article

Genome Sequences of Simian Hemorrhagic Fever Virus Variant NIH LVR42-0/M6941 Isolates (Arteriviridae: Arterivirus).

scientific article

HIV-1 superinfection despite broad CD8+ T-cell responses containing replication of the primary virus

scientific article published in November 2002

Haplessly hoping: macaque major histocompatibility complex made easy

scientific article published on January 2013

Hepatitis C virus NS3/NS4A DNA vaccine induces multiepitope T cell responses in rhesus macaques mimicking human immune responses [corrected]

scientific article published on 27 September 2011

Heterologous Protection against Asian Zika Virus Challenge in Rhesus Macaques

scientific article (publication date: 2 December 2016)

Heterologous protection against Asian Zika virus challenge in rhesus macaques

scientific article

High efficiency removal of methylene blue using SDS surface-modified ZnFe2O4 nanoparticles

scientific article

High genetic diversity and adaptive potential of two simian hemorrhagic fever viruses in a wild primate population

scientific article

High-Throughput Identification of MHC Class I Binding Peptides Using an Ultradense Peptide Array

scientific article published on 14 February 2020

High-level, lasting antiviral immunity induced by a bimodal AIDS vaccine and boosted by live-virus exposure: prevention of viremia

scientific article published on January 2012

Highly efficient maternal-fetal Zika virus transmission in pregnant rhesus macaques

scientific article (publication date: 11 February 2017)

Highly efficient maternal-fetal Zika virus transmission in pregnant rhesus macaques.

scientific article

Historical Outbreaks of Simian Hemorrhagic Fever in Captive Macaques Were Caused by Distinct Arteriviruses

scientific article published on 13 May 2015

Human, Nonhuman Primate, and Bat Cells Are Broadly Susceptible to Tibrovirus Particle Cell Entry

scientific article published on 26 April 2019

Identification of MHC class I sequences in Chinese-origin rhesus macaques

scientific article

Identification of novel MHC class I sequences in pig-tailed macaques by amplicon pyrosequencing and full-length cDNA cloning and sequencing

scientific article

Identification of seventeen new simian immunodeficiency virus-derived CD8+ T cell epitopes restricted by the high frequency molecule, Mamu-A*02, and potential escape from CTL recognition

scientific article published in October 2004

Immune responses and HIV: a little order from the chaos

scientific article

Immunogenetic Management Software: a new tool for visualization and analysis of complex immunogenetic datasets.

scientific article

Impact of viral dose and major histocompatibility complex class IB haplotype on viral outcome in mauritian cynomolgus monkeys vaccinated with Tat upon challenge with simian/human immunodeficiency virus SHIV89.6P

scientific article published on 16 June 2010

Improved full-length killer cell immunoglobulin-like receptor transcript discovery in Mauritian cynomolgus macaques

scientific article published on 25 March 2017

Infection via mosquito bite alters Zika virus tissue tropism and replication kinetics in rhesus macaques

scientific article published on 13 December 2017

Infection with "escaped" virus variants impairs control of simian immunodeficiency virus SIVmac239 replication in Mamu-B*08-positive macaques

scientific article

Integrated GIS and multivariate statistical analysis for regional scale assessment of heavy metal soil contamination: A critical review

scientific article published on 19 September 2017

Integrin alpha4beta7 is downregulated on the surfaces of simian immunodeficiency virus SIVmac239-infected cells

scientific article

Inter- and intra-host viral diversity in a large seasonal DENV2 outbreak

scientific article

KIR polymorphisms modulate peptide-dependent binding to an MHC class I ligand with a Bw6 motif

scientific article

KIR3DL01 recognition of Bw4 ligands in the rhesus macaque: maintenance of Bw4 specificity since the divergence of apes and Old World monkeys

scientific article

KIR3DL01 upregulation on gut natural killer cells in response to SIV infection of KIR- and MHC class I-defined rhesus macaques.

scientific article published on 14 July 2017

KIRigami: the case for studying NK cell receptors in SIV+ macaques

scientific article published on January 2008

LayerCake: a tool for the visual comparison of viral deep sequencing data

scientific article

Limited SARS-CoV-2 diversity within hosts and following passage in cell culture

scientific article published on 21 April 2020

Linking pig-tailed macaque major histocompatibility complex class I haplotypes and cytotoxic T lymphocyte escape mutations in simian immunodeficiency virus infection

scientific article

Long-term programming of antigen-specific immunity from gene expression signatures in the PBMC of rhesus macaques immunized with an SIV DNA vaccine

scientific article (publication date: 2011)

Loss of effector and anti-inflammatory natural killer T lymphocyte function in pathogenic simian immunodeficiency virus infection

scientific article

Low-cost ultra-wide genotyping using Roche/454 pyrosequencing for surveillance of HIV drug resistance

scientific article

MHC class I allele frequencies in pigtail macaques of diverse origin.

scientific article published on 10 November 2006

MHC class I characterization of Indonesian cynomolgus macaques

scientific article

MHC haplotype frequencies in a UK breeding colony of Mauritian cynomolgus macaques mirror those found in a distinct population from the same geographic origin

scientific article published on 5 November 2008

MHC heterozygote advantage in simian immunodeficiency virus-infected Mauritian cynomolgus macaques

scientific article

Macaque monkeys in Zika virus research: 1947-present

scientific article published on 24 July 2017

Major histocompatibility complex class I alleles associated with slow simian immunodeficiency virus disease progression bind epitopes recognized by dominant acute-phase cytotoxic-T-lymphocyte responses

scientific article published on August 2003

Major histocompatibility complex class I haplotype diversity in Chinese rhesus macaques

scientific article published on 08 July 2013

Major histocompatibility complex genotyping with massively parallel pyrosequencing

scientific article

Major histocompatibility complex haplotyping and long-amplicon allele discovery in cynomolgus macaques from Chinese breeding facilities

scientific article published on 11 January 2017

Maternal CD4+ T cells protect against severe congenital cytomegalovirus disease in a novel nonhuman primate model of placental cytomegalovirus transmission

scientific article

Mauritian cynomolgus macaques share two exceptionally common major histocompatibility complex class I alleles that restrict simian immunodeficiency virus-specific CD8+ T cells

scientific article published on April 2009

Measuring immunity to SARS-CoV-2 infection: comparing assays and animal models

scientific article published on 02 November 2020

Mesenchymal stem cells enhance allogeneic islet engraftment in nonhuman primates

scientific article published on 9 July 2010

Miscarriage and stillbirth following maternal Zika virus infection in nonhuman primates

scholarly article by Dawn M Dudley et al published August 2018 in Nature Medicine

Molecularly barcoded Zika virus libraries to probe in vivo evolutionary dynamics.

scientific article published on 28 March 2018

Naturally Circulating Hepatitis A Virus in Olive Baboons, Uganda

scientific article published on July 2016

Nef gene evolution from a single transmitted strain in acute SIV infection

scientific article published on 08 June 2009

Neonatal Development in Prenatally Zika Virus-Exposed Infant Macaques with Dengue Immunity

scientific article published in 2021

No assembly required: Full-length MHC class I allele discovery by PacBio circular consensus sequencing

scientific article published on 28 May 2015

Nomenclature report on the major histocompatibility complex genes and alleles of Great Ape, Old and New World monkey species

scientific article

Novel MHC class I full-length allele and haplotype characterization in sooty mangabeys

scientific article published on 26 May 2015

Novel full-length major histocompatibility complex class I allele discovery and haplotype definition in pig-tailed macaques

scientific article published on 13 November 2017

Novel, divergent simian hemorrhagic fever viruses in a wild Ugandan red colobus monkey discovered using direct pyrosequencing

scientific article published in 2011

Ocular and uteroplacental pathology in a macaque pregnancy with congenital Zika virus infection

scientific article published on 30 January 2018

Open versus endovascular stent graft repair of abdominal aortic aneurysms: a meta-analysis of randomized trials

scientific article

Oropharyngeal mucosal transmission of Zika virus in rhesus macaques

scientific article (publication date: 8 February 2017)

Oropharyngeal mucosal transmission of Zika virus in rhesus macaques.

scientific article published on August 2017

Pegivirus avoids immune recognition but does not attenuate acute-phase disease in a macaque model of HIV infection

scientific article published on 26 October 2017

Pirate primates in uncharted waters: lymphocyte transfers in unrelated, MHC-matched macaques

scientific article published in January 2009

Postnatal Zika virus infection is associated with persistent abnormalities in brain structure, function, and behavior in infant macaques

scientific article published in April 2018

Previous exposure to dengue virus is associated with increased Zika virus burden at the maternal-fetal interface in rhesus macaques

scientific article published on 30 July 2021

Primary infection with dengue or Zika virus does not affect the severity of heterologous secondary infection in macaques

scientific article published on 01 August 2019

Pyrosequencing reveals restricted patterns of CD8+ T cell escape-associated compensatory mutations in simian immunodeficiency virus

scientific article published on 12 October 2011

Rapid Identification of Major Histocompatibility Complex Class I Haplotypes Using Deep Sequencing in an Endangered Old World Monkey

scientific article published on 22 January 2016

Rapid high-resolution MHC class I genotyping of Chinese rhesus macaques by capillary reference strand-mediated conformational analysis

scientific article published on 16 July 2008

Rapid viral escape at an immunodominant simian-human immunodeficiency virus cytotoxic T-lymphocyte epitope exacts a dramatic fitness cost

scientific article

Rapid, repeated, low-dose challenges with SIVmac239 infect animals in a condensed challenge window

scientific article

Real-Time Sharing of Zika Virus Data in an Interconnected World

scientific article

Reorganization and expansion of the nidoviral family Arteriviridae

scientific article

Resource brief: the National Non-Human Primate DNA Bank

scientific article

Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs).

scientific article published on October 2009

Restricted MHC class I A locus diversity in olive and hybrid olive/yellow baboons from the Southwest National Primate Research Center

scientific article published on 28 March 2018

Revealing fine-scale spatiotemporal differences in SARS-CoV-2 introduction and spread

scientific article published on 03 November 2020

Reversion of CTL escape–variant immunodeficiency viruses in vivo

article

SIV Genome-Wide Pyrosequencing Provides a Comprehensive and Unbiased View of Variation within and outside CD8 T Lymphocyte Epitopes ⬇️

scientific article published on October 24, 2012

Screening for prostatic cancer

scientific article

Selection on haemagglutinin imposes a bottleneck during mammalian transmission of reassortant H5N1 influenza viruses

scientific article

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility

scientific article

Seroprevalence of Zika Virus in Wild African Green Monkeys and Baboons

scientific article (publication date: 8 March 2017)

Simian hemorrhagic fever virus cell entry is dependent on CD163 and uses a clathrin-mediated endocytosis-like pathway

scientific article

Simian immunodeficiency virus SIVmac239 infection of major histocompatibility complex-identical cynomolgus macaques from Mauritius

scientific article published on 11 October 2006

Simian immunodeficiency virus SIVmac239Deltanef vaccination elicits different Tat28-35SL8-specific CD8+ T-cell clonotypes compared to a DNA prime/adenovirus type 5 boost regimen in rhesus macaques

scientific article published on 26 January 2011

Simultaneous positive and purifying selection on overlapping reading frames of the tat and vpr genes of simian immunodeficiency virus.

scientific article published on September 2001

Special issue: 26th Annual Symposium of Nonhuman Primate Models for AIDS. Introduction.

scientific article published in October 2009

Specific CD8+ T cell responses correlate with control of simian immunodeficiency virus replication in Mauritian cynomolgus macaques

scientific article published on 9 May 2012

Specific Detection of Two Divergent Simian Arteriviruses Using RNAscope In Situ Hybridization

scientific article

Subclinical Infection of Macaques and Baboons with A Baboon Simarterivirus

scholarly article by Connor Buechler et al published 10 December 2018 in Viruses

Survey of major histocompatibility complex class II diversity in pig-tailed macaques

scientific article

T cell response specificity and magnitude against SIVmac239 are not concordant in major histocompatibility complex-matched animals

scientific article

Targeting cleanups towards a more sustainable future

scientific article published on 12 January 2018

Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia

scientific article published in Nature

Tat-vaccinated macaques do not control simian immunodeficiency virus SIVmac239 replication

scientific article

Tertiary mutations stabilize CD8+ T lymphocyte escape-associated compensatory mutations following transmission of simian immunodeficiency virus

scientific article

The TB-specific CD4(+) T cell immune repertoire in both cynomolgus and rhesus macaques largely overlap with humans

scientific article published on 28 August 2015

The genome of the vervet (Chlorocebus aethiops sabaeus)

scientific article published on 16 September 2015

The high frequency Indian rhesus macaque MHC class I molecule, Mamu-B*01, does not appear to be involved in CD8+ T lymphocyte responses to SIVmac239

scientific article published on 01 November 2005

The high-frequency major histocompatibility complex class I allele Mamu-B*17 is associated with control of simian immunodeficiency virus SIVmac239 replication

scientific article

The landscape of antibody binding in SARS-CoV-2 infection

scientific article published on 18 June 2021

The landscape of antibody binding to SARS-CoV-2

scientific article published on 11 October 2020

The major genetic determinants of HIV-1 control affect HLA class I peptide presentation

scientific article

The orthologs of HLA-DQ and -DP genes display abundant levels of variability in macaque species

scientific article published on 22 October 2016

The pigtail macaque MHC class I allele Mane-A*10 presents an immundominant SIV Gag epitope: identification, tetramer development and implications of immune escape and reversion.

scientific article

The role of MHC class I allele Mamu-A*07 during SIV(mac)239 infection

scientific article

Therapeutic vaccination against the rhesus lymphocryptovirus EBNA-1 homologue, rhEBNA-1, elicits T cell responses to novel epitopes in rhesus macaques.

scientific article published on 02 October 2013

Trafficking, persistence, and activation state of adoptively transferred allogeneic and autologous Simian Immunodeficiency Virus-specific CD8(+) T cell clones during acute and chronic infection of rhesus macaques

scientific article

Transcriptionally abundant major histocompatibility complex class I alleles are fundamental to nonhuman primate simian immunodeficiency virus-specific CD8+ T cell responses

scientific article

Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck

scientific article published on 17 November 2020

Two novel simian arteriviruses in captive and wild baboons (Papio spp.).

scientific article

Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing

scientific article

Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeficiency virus-infected macaques

scientific article published on 10 June 2009

Understanding cytotoxic T‐lymphocyte escape during simian immunodeficiency virus infection ⬇️

scientific article published on October 1, 2001

Unusually high frequency MHC class I alleles in Mauritian origin cynomolgus macaques

scientific article published in October 2005

Vaccination with CTL epitopes that escape: an alternative approach to HIV vaccine development?

article

Vaccine-induced cellular immune responses reduce plasma viral concentrations after repeated low-dose challenge with pathogenic simian immunodeficiency virus SIVmac239

scientific article

Variable prevalence and functional diversity of the antiretroviral restriction factor TRIMCyp in Macaca fascicularis

scientific article published on 27 July 2011

Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef.

scientific article

Visualizing virus population variability from next generation sequencing data

scholarly article published October 2011

Whole genome sequencing of SIV-infected macaques identifies candidate loci that may contribute to host control of virus replication

scientific article

Whole-genome characterization of human and simian immunodeficiency virus intrahost diversity by ultradeep pyrosequencing

scientific article

Within-Host Evolution of Simian Arteriviruses in Crab-Eating Macaques

scientific article

Within-host evolution of CD8+-TL epitopes encoded by overlapping and non-overlapping reading frames of simian immunodeficiency virus

scientific article

Zika in the Americas, year 2: What have we learned? What gaps remain? A report from the Global Virus Network

scientific article

Zoonotic Potential of Simian Arteriviruses

scientific article

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