List of works - Bettina Warscheid

Cytoscape: Software for Visualization and Analysis of Biological Networks

article

A proteomic approach towards the identification of the matrix protein content of the two types of microbodies in Neurospora crassa

article by David Managadze et al published 26 July 2010 in Proteomics

Protein labeling by iTRAQ: A new tool for quantitative mass spectrometry in proteome research

scholarly article by Sebastian Wiese published in February 2007

Mitochondrial outer membrane proteome of Trypanosoma brucei reveals novel factors required to maintain mitochondrial morphology

scientific article published on 6 December 2012

Dual role of mitofilin in mitochondrial membrane organization and protein biogenesis

scientific article

Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling

scientific journal article

Mistargeted mitochondrial proteins activate a proteostatic response in the cytosol

scientific article

Rcf1 mediates cytochrome oxidase assembly and respirasome formation, revealing heterogeneity of the enzyme complex

scientific article

Genome-wide characterization of miR-34a induced changes in protein and mRNA expression by a combined pulsed SILAC and microarray analysis

scientific article (publication date: August 2011)

PEX14 is required for microtubule-based peroxisome motility in human cells

scientific article

Shy1 couples Cox1 translational regulation to cytochrome c oxidase assembly

scientific article

Detection of novel biomarkers of liver cirrhosis by proteomic analysis

scientific article

Psb27, a cyanobacterial lipoprotein, is involved in the repair cycle of photosystem II

scientific journal article

MITRAC links mitochondrial protein translocation to respiratory-chain assembly and translational regulation

scientific article

Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor

scientific article

Tmem16b is specifically expressed in the cilia of olfactory sensory neurons

scientific article published on 25 January 2010

Mitochondrial Preprotein Translocase of Trypanosomatids Has a Bacterial Origin

scientific article published in October 2011

Mdm38 interacts with ribosomes and is a component of the mitochondrial protein export machinery

scientific article

Composition and topology of the endoplasmic reticulum-mitochondria encounter structure

scientific article

Dual function of Sdh3 in the respiratory chain and TIM22 protein translocase of the mitochondrial inner membrane

scientific article

Definition of a High-Confidence Mitochondrial Proteome at Quantitative Scale

scientific article published on June 2017

Coa3 and Cox14 are essential for negative feedback regulation of COX1 translation in mitochondria

scientific article

Coupling of mitochondrial import and export translocases by receptor-mediated supercomplex formation

scientific article

COA6 is a mitochondrial complex IV assembly factor critical for biogenesis of mtDNA-encoded COX2

scientific article

Ubp15p, a ubiquitin hydrolase associated with the peroxisomal export machinery

scientific article

Mgr2 promotes coupling of the mitochondrial presequence translocase to partner complexes

scientific article

YidC occupies the lateral gate of the SecYEG translocon and is sequentially displaced by a nascent membrane protein.

scientific article published on 22 April 2013

Mitochondrial protein import receptors in Kinetoplastids reveal convergent evolution over large phylogenetic distances

scientific article

The proteome of human liver peroxisomes: identification of five new peroxisomal constituents by a label-free quantitative proteomics survey

scientific article

Study of Early Leaf Senescence inArabidopsis thalianaby Quantitative Proteomics Using Reciprocal14N/15N Labeling and Difference Gel Electrophoresis

Role of MINOS in Mitochondrial Membrane Architecture: Cristae Morphology and Outer Membrane Interactions Differentially Depend on Mitofilin Domains

article by Ralf M. Zerbes et al published September 2012 in Journal of Molecular Biology

Identification of core components and transient interactors of the peroxisomal importomer by dual-track stable isotope labeling with amino acids in cell culture analysis

scientific article

Early leaf senescence is associated with an altered cellular redox balance in Arabidopsis cpr5/old1 mutants

scientific article published in September 2008

Role of mitochondrial inner membrane organizing system in protein biogenesis of the mitochondrial outer membrane

scientific article

A systems study reveals concurrent activation of AMPK and mTOR by amino acids

scientific article published on 21 November 2016

The Bacterial SRP Receptor, SecA and the Ribosome Use Overlapping Binding Sites on the SecY Translocon

Mitochondrial Protein Synthesis Adapts to Influx of Nuclear-Encoded Protein

scientific article published on 28 September 2016

p53-Regulated Networks of Protein, mRNA, miRNA, and lncRNA Expression Revealed by Integrated Pulsed Stable Isotope Labeling With Amino Acids in Cell Culture (pSILAC) and Next Generation Sequencing (NGS) Analyses

scientific article

A combined approach of quantitative interaction proteomics and live-cell imaging reveals a regulatory role for endoplasmic reticulum (ER) reticulon homology proteins in peroxisome biogenesis

scientific article

Identification of proteomic differences between squamous cell carcinoma of the lung and bronchial epithelium

scientific article published on 27 January 2009

Promiscuous targeting of polytopic membrane proteins to SecYEG or YidC by the Escherichia coli signal recognition particle

scientific article published on 7 December 2011

New dimensions in the study of protein complexes using quantitative mass spectrometry

scientific article published on 18 April 2009

Top-down de Novo protein sequencing of a 13.6 kDa camelid single heavy chain antibody by matrix-assisted laser desorption ionization-time-of-flight/time-of-flight mass spectrometry

scientific article

Quantitative proteomics identifies redox switches for global translation modulation by mitochondrially produced reactive oxygen species

scientific article published on 22 January 2018

Structure and function of intact photosystem 1 monomers from the cyanobacterium Thermosynechococcus elongatus

scientific article

Charting organellar importomes by quantitative mass spectrometry.

scientific article

A bacterial toxin catalyzing tyrosine glycosylation of Rho and deamidation of Gq and Gi proteins

scientific article

MITRAC7 Acts as a COX1-Specific Chaperone and Reveals a Checkpoint during Cytochrome c Oxidase Assembly

scientific journal article

Assembly of β-barrel proteins in the mitochondrial outer membrane

scientific article

The non-canonical mitochondrial inner membrane presequence translocase of trypanosomatids contains two essential rhomboid-like proteins

scientific article published on 19 December 2016

List of works by Bettina Warscheid

Cytoscape: Software for Visualization and Analysis of Biological Networks

A proteomic approach towards the identification of the matrix protein content of the two types of microbodies in Neurospora crassa

Protein labeling by iTRAQ: A new tool for quantitative mass spectrometry in proteome research

Mitochondrial outer membrane proteome of Trypanosoma brucei reveals novel factors required to maintain mitochondrial morphology

Dual role of mitofilin in mitochondrial membrane organization and protein biogenesis

Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling

Mistargeted mitochondrial proteins activate a proteostatic response in the cytosol

Rcf1 mediates cytochrome oxidase assembly and respirasome formation, revealing heterogeneity of the enzyme complex

Genome-wide characterization of miR-34a induced changes in protein and mRNA expression by a combined pulsed SILAC and microarray analysis

PEX14 is required for microtubule-based peroxisome motility in human cells

Shy1 couples Cox1 translational regulation to cytochrome c oxidase assembly

Detection of novel biomarkers of liver cirrhosis by proteomic analysis

Psb27, a cyanobacterial lipoprotein, is involved in the repair cycle of photosystem II

MITRAC links mitochondrial protein translocation to respiratory-chain assembly and translational regulation

Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor

Tmem16b is specifically expressed in the cilia of olfactory sensory neurons

Mitochondrial Preprotein Translocase of Trypanosomatids Has a Bacterial Origin

Mdm38 interacts with ribosomes and is a component of the mitochondrial protein export machinery

Composition and topology of the endoplasmic reticulum-mitochondria encounter structure

Dual function of Sdh3 in the respiratory chain and TIM22 protein translocase of the mitochondrial inner membrane

Definition of a High-Confidence Mitochondrial Proteome at Quantitative Scale

Coa3 and Cox14 are essential for negative feedback regulation of COX1 translation in mitochondria

Coupling of mitochondrial import and export translocases by receptor-mediated supercomplex formation

COA6 is a mitochondrial complex IV assembly factor critical for biogenesis of mtDNA-encoded COX2

Ubp15p, a ubiquitin hydrolase associated with the peroxisomal export machinery

Mgr2 promotes coupling of the mitochondrial presequence translocase to partner complexes

YidC occupies the lateral gate of the SecYEG translocon and is sequentially displaced by a nascent membrane protein.

Mitochondrial protein import receptors in Kinetoplastids reveal convergent evolution over large phylogenetic distances

The proteome of human liver peroxisomes: identification of five new peroxisomal constituents by a label-free quantitative proteomics survey

Study of Early Leaf Senescence inArabidopsis thalianaby Quantitative Proteomics Using Reciprocal14N/15N Labeling and Difference Gel Electrophoresis

Role of MINOS in Mitochondrial Membrane Architecture: Cristae Morphology and Outer Membrane Interactions Differentially Depend on Mitofilin Domains

Identification of core components and transient interactors of the peroxisomal importomer by dual-track stable isotope labeling with amino acids in cell culture analysis

Early leaf senescence is associated with an altered cellular redox balance in Arabidopsis cpr5/old1 mutants

Role of mitochondrial inner membrane organizing system in protein biogenesis of the mitochondrial outer membrane

A systems study reveals concurrent activation of AMPK and mTOR by amino acids

The Bacterial SRP Receptor, SecA and the Ribosome Use Overlapping Binding Sites on the SecY Translocon

Mitochondrial Protein Synthesis Adapts to Influx of Nuclear-Encoded Protein

p53-Regulated Networks of Protein, mRNA, miRNA, and lncRNA Expression Revealed by Integrated Pulsed Stable Isotope Labeling With Amino Acids in Cell Culture (pSILAC) and Next Generation Sequencing (NGS) Analyses

A combined approach of quantitative interaction proteomics and live-cell imaging reveals a regulatory role for endoplasmic reticulum (ER) reticulon homology proteins in peroxisome biogenesis

Identification of proteomic differences between squamous cell carcinoma of the lung and bronchial epithelium

Promiscuous targeting of polytopic membrane proteins to SecYEG or YidC by the Escherichia coli signal recognition particle

New dimensions in the study of protein complexes using quantitative mass spectrometry

Top-down de Novo protein sequencing of a 13.6 kDa camelid single heavy chain antibody by matrix-assisted laser desorption ionization-time-of-flight/time-of-flight mass spectrometry

Quantitative proteomics identifies redox switches for global translation modulation by mitochondrially produced reactive oxygen species

Structure and function of intact photosystem 1 monomers from the cyanobacterium Thermosynechococcus elongatus

Charting organellar importomes by quantitative mass spectrometry.

A bacterial toxin catalyzing tyrosine glycosylation of Rho and deamidation of Gq and Gi proteins

MITRAC7 Acts as a COX1-Specific Chaperone and Reveals a Checkpoint during Cytochrome c Oxidase Assembly

Assembly of β-barrel proteins in the mitochondrial outer membrane

The non-canonical mitochondrial inner membrane presequence translocase of trypanosomatids contains two essential rhomboid-like proteins