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List of works by Janke Schinkel

8 weeks of sofosbuvir/ledipasvir is effective in DAA-naive non-cirrhotic HCV genotype 4 infected patients (HEPNED-001 study)

scientific article published on 05 December 2018

A comparison of 454 sequencing and clonal sequencing for the characterization of hepatitis C virus NS3 variants

scientific article published on 26 March 2015

A method for near full-length amplification and sequencing for six hepatitis C virus genotypes

scientific article

Added value of chest CT in suspected COVID-19: an analysis of 239 patients

scientific article published on 16 July 2020

Alarming incidence of hepatitis C virus re-infection after treatment of sexually acquired acute hepatitis C virus infection in HIV-infected MSM.

scientific article published in November 2011

Antiviral activity of narlaprevir combined with ritonavir and pegylated interferon in chronic hepatitis C patients

scientific article published on November 2010

Assay optimization for molecular detection of Zika virus

scientific article (publication date: December 2016)

Bacterial meningitis caused by the use of ventricular or lumbar cerebrospinal fluid catheters.

scientific article published in February 2005

Bile-salt stimulated lipase polymorphisms do not associate with HCV susceptibility

scientific article published on 14 October 2019

Changes in HIV RNA and CD4 cell count after acute HCV infection in chronically HIV-infected individuals

scientific article published on April 2015

Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing

scientific article published on 11 January 2017

Colonial history and contemporary transmission shape the genetic diversity of hepatitis C virus genotype 2 in Amsterdam

scientific article

Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance

scientific article published on 21 February 2019

DC-SIGN Polymorphisms Associated with Risk of Hepatitis C Virus Infection Among Men who Have Sex with Men but not Among Injecting Drug Users

scientific article published on 13 November 2017

Dengue virus infection among long-term travelers from the Netherlands: A prospective study, 2008-2011.

scientific article published on 7 February 2018

Design and Implementation of a Multilevel Intervention to Reduce Hepatitis C Transmission Among Men Who Have Sex With Men in Amsterdam: Co-Creation and Usability Study

scientific article published on 11 September 2020

Development and evaluation of a four-tube real time multiplex PCR assay covering fourteen respiratory viruses, and comparison to its corresponding single target counterparts.

scientific article published on 14 May 2011

Development and validation of the HCV-MOSAIC risk score to assist testing for acute hepatitis C virus (HCV) infection in HIV-infected men who have sex with men (MSM).

scientific article

Dried blood spot self-sampling at home is a feasible technique for hepatitis C RNA detection

scientific article published on 14 April 2020

Dynamic changes in HCV RNA levels and viral quasispecies in a patient with chronic hepatitis C after telaprevir-based treatment

scientific article published on 3 December 2011

Early loss of immunity against measles following allogeneic hematopoietic stem cell transplantation

scientific article published on 16 August 2019

Emergence of Hepatitis C Virus Genotype 4: Phylogenetic Analysis Reveals Three Distinct Epidemiological Profiles

scientific article (publication date: December 2009)

Erratum to: 'Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance' (J Hepatol 2019; 71(1): 14-24)

scientific article published on 01 August 2020

Evaluation of a hepatitis C virus (HCV) antigen assay for routine HCV screening among men who have sex with men infected with HIV.

scientific article published on 18 December 2014

Evaluation of persistence of resistant variants with ultra-deep pyrosequencing in chronic hepatitis C patients treated with telaprevir

scientific article

Febrile neutropenia: significance of elaborated screening for respiratory viruses, and the comparison of different sampling methods, in neutropenic patients with hematological malignancies

scientific article published on 27 June 2013

Female sex and IL28B, a synergism for spontaneous viral clearance in hepatitis C virus (HCV) seroconverters from a community-based cohort

scientific article

Fourth human parechovirus serotype

scientific article published on October 2006

Frequent HCV reinfection and superinfection in a cohort of injecting drug users in Amsterdam

scientific article published on 18 June 2009

Frequent detection of respiratory viruses without symptoms: toward defining clinically relevant cutoff values

scientific article

Genetic characterization of multiple hepatitis C virus infections following acute infection in HIV-infected men who have sex with men.

scientific article

Genomic characterization of hepatitis C virus transmitted founder variants with deep sequencing

scientific article published on 08 March 2019

Genomic variability of within-host hepatitis C variants in acute infection

scientific article published on 22 January 2019

HCV micro-elimination in individuals with HIV in the Netherlands 4 years after universal access to direct-acting antivirals: a retrospective cohort study

scientific article published on 22 December 2020

HCV transmission among MSM in Amsterdam: external introductions may complicate micro-elimination efforts

scientific article published on 08 December 2020

HIV-1 exposure and immune activation enhance sexual transmission of Hepatitis C virus by primary Langerhans cells

article

HVR-1 heterogeneity during treatment with telaprevir with or without pegylated interferon alfa-2a

scientific article published on 5 August 2011

Hepatitis B and C screening needs among different ethnic groups: A population-based study in Amsterdam, the Netherlands

scientific article published on 31 May 2019

Hepatitis C Virus Reinfection and Spontaneous Clearance of Reinfection--the InC3 Study

scientific article

Hepatitis C testing and treatment among active drug users in Amsterdam: results from the DUTCH-C project

scientific article published in January 2011

Hepatitis C virus (HCV) antibody dynamics following acute HCV infection and reinfection among HIV-infected men who have sex with men.

scientific article published on 3 September 2014

Hepatitis C virus Broadly Neutralizing Monoclonal Antibodies Isolated 25 Years after Spontaneous Clearance

scientific article

Hepatitis C virus infections among HIV-infected men who have sex with men: an expanding epidemic

scientific article published on July 2009

Hepatitis C virus reinfection following treatment among people who use drugs

scientific article published on August 2013

Hepatitis E in Long-Term Travelers from the Netherlands to Subtropical and Tropical Countries, 2008-2011.

scientific article

Hepatitis E virus as a Cause of Acute Hepatitis in The Netherlands

scientific article published on 3 February 2016

High prevalence of previous dengue virus infection among first-generation Surinamese immigrants in the Netherlands

scientific article

High resolution evolutionary analysis of within-host hepatitis C virus infection

High-Resolution Evolutionary Analysis of Within-Host Hepatitis C Virus Infection

scholarly article by Jayna Raghwani et al published 5 May 2019 in Journal of Infectious Diseases

Historical Trends in the Hepatitis C Virus Epidemics in North America and Australia

scientific article published on 28 August 2016

Human parechoviruses as an important viral cause of sepsislike illness and meningitis in young children

scientific article published in August 2008

Identification of two Hepatitis C Virus isolates that failed genotyping by Versant LiPA 2.0 assay

scientific article published on 24 January 2009

Imported Zika virus infection in the Netherlands

scientific article published on January 2015

Incidence of HCV reinfection among HIV-positive MSM and its association with sexual risk behavior: a longitudinal analysis

scientific article published on 27 May 2020

Interferon lambda 3 genotype predicts hepatitis C virus RNA levels in early acute infection among people who inject drugs: the InC(3) study

scientific article

Lack of value of routine analysis of cerebrospinal fluid for prediction and diagnosis of external drainage-related bacterial meningitis

scientific article published in January 2006

Limited naturally occurring escape in broadly neutralizing antibody epitopes in hepatitis C glycoprotein E2 and constrained sequence usage in acute infection

scientific article published on 5 January 2017

Limited overlap between phylogenetic HIV and HCV clusters illustrates the dynamic sexual network structure of Dutch HIV-infected MSM.

scientific article published on 07 July 2017

Low incidence of reinfection with the hepatitis C virus following treatment in active drug users in Amsterdam

scientific article published on November 2012

MSM starting preexposure prophylaxis are at risk of hepatitis C virus infection

scientific article published on July 2017

Meta-analysis of mutations in the NS5A gene and hepatitis C virus resistance to interferon therapy: uniting discordant conclusions

scientific article published on April 2004

Multiplex flow cytometry-based assay to study the breadth of antibody responses against E1E2 glycoproteins of hepatitis C virus

scientific article published on 27 August 2017

New class of medicines for chronic hepatitis C

scientific article published in January 2012

No chikungunya virus infections among Dutch long-term travellers to (sub)tropical countries: a prospective study 2008-2011

scientific article published on 26 February 2019

No detection of Zika virus infection in asymptomatic Dutch military personnel after deployment in high endemic areas (Belize, Curacao, Saint Martin) from December 2016 to December 2017

scientific article published on 20 September 2018

No impact of hepatitis C virus infection on mortality among drug users during the first decade after seroconversion

scientific article published on 20 May 2011

Optimized cell systems for the investigation of hepatitis C virus E1E2 glycoproteins

scientific article published on 04 November 2020

Origin and evolution of the unique hepatitis C virus circulating recombinant form 2k/1b

scientific article published on 23 November 2011

Patterns of hepatitis C virus RNA levels during acute infection: the InC3 study

scientific article

Performance Evaluation of the New Roche cobas AmpliPrep/cobas TaqMan HCV Test, Version 2.0, for Detection and Quantification of Hepatitis C Virus RNA ⬇️

scientific article published on November 14, 2012

Persistence of NS5B-S282T, a sofosbuvir resistance-associated substitution, in a HIV/HCV-coinfected MSM with risk of onward transmission

article

Pharmacokinetics and antiviral activity of PHX1766, a novel HCV protease inhibitor, using an accelerated Phase I study design

scientific article published on 30 November 2011

Quantitation of respiratory viruses in relation to clinical course in children with acute respiratory tract infections

scientific article published in January 2010

Real-time PCR for the detection of Giardia lamblia.

scientific article

Resistance-associated polymorphisms in Dutch hepatitis C genotype 1a patients with and without HIV infection

Risk Factors for Sexual Transmission of Hepatitis C Virus Among Human Immunodeficiency Virus-Infected Men Who Have Sex With Men: A Case-Control Study

scientific article

SNP rs688 within the low-density lipoprotein receptor (LDL-R) gene associates with HCV susceptibility

scientific article published on 17 October 2018

Safety and antiviral activity of JTK-652: a novel HCV infection inhibitor

scientific article published on January 2010

Safety, tolerability, and antiviral effect of RG-101 in patients with chronic hepatitis C: a phase 1B, double-blind, randomised controlled trial

scientific article

Sequencing of hepatitis C virus for detection of resistance to direct-acting antiviral therapy: A systematic review.

scientific article published on 22 May 2017

Serodiagnosis of Zika virus (ZIKV) infections by a novel NS1-based ELISA devoid of cross-reactivity with dengue virus antibodies: a multicohort study of assay performance, 2015 to 2016

scientific article (publication date: 15 December 2016)

Seven years of chronic hepatitis C virus infection in an HIV-infected man without detectable antibodies

scientific article

Sexually transmitted hepatitis C virus infections: current trends, and recent advances in understanding the spread in men who have sex with men

scientific article published on 01 August 2019

Simultaneous detection of Entamoeba histolytica, Giardia lamblia, and Cryptosporidium parvum in fecal samples by using multiplex real-time PCR.

scientific article published on March 2004

Simultaneous detection of five different DNA targets by real-time Taqman PCR using the Roche LightCycler480: Application in viral molecular diagnostics.

scientific article published on 10 January 2007

Sofosbuvir shows antiviral activity in a patient with chronic hepatitis E virus infection

scientific article published in October 2016

Spontaneous Clearance of Hepatitis C Virus Infection Among Human Immunodeficiency Virus-Infected Men Who Have Sex With Men.

scientific article

Stabilizing incidence of hepatitis C virus infection among men who have sex with men in Amsterdam

scientific article published in August 2014

The Influence of Hepatitis C Virus Genetic Region on Phylogenetic Clustering Analysis

scientific article published on 20 July 2015

The effects of female sex, viral genotype, and IL28B genotype on spontaneous clearance of acute hepatitis C virus infection

scientific article

The hepatitis C virus nonstructural protein 3 Q80K polymorphism is frequently detected and transmitted among HIV-infected MSM in the Netherlands

scientific article published on January 2017

The potentiating effect of ribavirin on interferon in the treatment of hepatitis C: lack of evidence for ribavirin-induced viral mutagenesis.

scientific article published on December 2003

Theoretical and experimental assessment of degenerate primer tagging in ultra-deep applications of next-generation sequencing

scientific article published on 7 May 2014

Thrombocytopenia and subcutaneous bleedings in a patient with Zika virus infection

scientific article

Treatment of acute hepatitis C genotypes 1 and 4 with 8 weeks of grazoprevir plus elbasvir (DAHHS2): an open-label, multicentre, single-arm, phase 3b trial

scientific article published on 17 January 2019

Treatment of acute hepatitis C virus infection in HIV-infected MSM: the effect of treatment duration

scientific article published in June 2011

Trends in hepatitis C virus infections among MSM attending a sexually transmitted infection clinic; 1995-2010.

scientific article

Uncommon presentation of Zika fever or co-infection? - Authors' reply

scientific article

Validation of Clinical Application of Cytomegalovirus Plasma DNA Load Measurement and Definition of Treatment Criteria by Analysis of Correlation to Antigen Detection.

scientific article published in October 2004

Validation of clinical application of cytomegalovirus plasma DNA load measurement and definition of treatment criteria by analysis of correlation to antigen detection

scientific article

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