List of works by Bernard Henrissat

A 1,3-beta-glucanosyltransferase isolated from the cell wall of Aspergillus fumigatus is a homologue of the yeast Bgl2p

scientific article published in November 1998

A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility

scientific article

A Metagenomic Investigation of the Duodenal Microbiota Reveals Links with Obesity

scientific article published on 10 September 2015

A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep

scientific article

A Novel, Noncatalytic Carbohydrate-binding Module Displays Specificity for Galactose-containing Polysaccharides through Calcium-mediated Oligomerization

scientific article

A bifunctionalized fluorogenic tetrasaccharide as a substrate to study cellulases

scientific article published on 01 January 1997

A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9.

scientific article published on 13 April 2017

A catalog of microbial genes from the bovine rumen reveals the determinants of herbivory

article

A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana.

scientific article

A classification of glycosyl hydrolases based on amino acid sequence similarities ⬇️

scientific article published on December 1, 1991

A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities

scientific article

A core gut microbiome in obese and lean twins

scientific article

A family GH51 α-l-arabinofuranosidase from Pleurotus ostreatus: identification, recombinant expression and characterization

scientific article published on 13 November 2011

A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic

scientific article (publication date: 16 January 2017)

A glycogene mutation map for discovery of diseases of glycosylation

scientific article

A hierarchical classification of polysaccharide lyases for glycogenomics

scientific article

A metagenome-derived thermostable β-glucanase with an unusual module architecture which defines the new glycoside hydrolase family GH148.

scientific article published on 11 December 2017

A metagenomics investigation of carbohydrate-active enzymes along the goat and camel intestinal tract

scientific article published on 14 March 2019

A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).

scientific article published on 31 January 2018

A model species for agricultural pest genomics: the genome of the Colorado potato beetle,Leptinotarsa decemlineata(Coleoptera: Chrysomelidae)

scholarly article published 22 September 2017

A modular family 19 chitinase found in the prokaryotic organism Streptomyces griseus HUT 6037.

scientific article published on September 1996

A new archaeal beta-glycosidase from Sulfolobus solfataricus: seeding a novel retaining beta-glycan-specific glycoside hydrolase family along with the human non-lysosomal glucosylceramidase GBA2

scientific article

A new cellulase family

scientific article published in February 1997

A novel α-N-acetylgalactosaminidase family with an NAD+-dependent catalytic mechanism suitable for enzymatic removal of blood group A antigens

A novel, small endoglucanase gene, egl5, from Trichoderma reesei isolated by expression in yeast

scientific article published on July 1994

A parts list for fungal cellulosomes revealed by comparative genomics

scientific article published on 30 May 2017

A scheme for designating enzymes that hydrolyse the polysaccharides in the cell walls of plants

scientific article published on 01 March 1998

A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation

scientific article published on 22 October 2018

AA16, a new lytic polysaccharide monooxygenase family identified in fungal secretomes

scientific article published on 16 March 2019

Abundance and diversity of dockerin-containing proteins in the fiber-degrading rumen bacterium, Ruminococcus flavefaciens FD-1.

scientific article

Active-site motifs of lysosomal acid hydrolases: invariant features of clan GH-A glycosyl hydrolases deduced from hydrophobic cluster analysis

scientific article

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs

scientific article

Amino acid sequence similarities between low molecular weight endo-1,4-beta-xylanases and family H cellulases revealed by clustering analysis

scientific article published in April 1993

An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion. ⬇️

scientific article published on 22 February 2018

An evolutionarily distinct family of polysaccharide lyases removes rhamnose capping of complex arabinogalactan proteins

scientific article published on 21 June 2017

An evolving hierarchical family classification for glycosyltransferases

scientific article (publication date: 25 April 2003)

Analysis of carbohydrate-active enzymes in Thermogemmatispora sp. strain T81 reveals carbohydrate degradation ability

scientific article published in 2018

Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood

scientific article

Analysis of the structural and functional diversity of plant cell wall specific family 6 carbohydrate binding modules

scientific article

Ancient acquisition of "alginate utilization loci" by human gut microbiota.

scientific article published on 23 May 2018

Are stool samples suitable for studying the link between gut microbiota and obesity?

scientific article

Aspergillus aculeatus beta-1,4-galactanase: substrate recognition and relations to other glycoside hydrolases in clan GH-A

scientific article

Assignment of the 1H, 13C, and 15N resonances of the 22,5 kDa CBM28 module of the cellulase Cel5I of Clostridium cellulolyticum

scientific article

Author Correction: Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions

scientific article published on 20 October 2020

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species

scientific article

Bacteria from diverse habitats colonize and compete in the mouse gut.

scientific article

Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations.

scientific article

Bacterial glycosidases for the production of universal red blood cells

scientific article

Bacteroidetes use thousands of enzyme combinations to break down glycans

scientific article published on 03 May 2019

Bifidobacterium asteroides PRL2011 genome analysis reveals clues for colonization of the insect gut

scientific article

Biochemical analysis of recombinant fungal mutanases. A new family of alpha1,3-glucanases with novel carbohydrate-binding domains

scientific article published in January 2000

Biochemical and structural characterization of the intracellular mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel glycoside hydrolase family belonging to clan GH-A

scientific article

Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis

scientific article

Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina

scientific article published on 01 August 2018

Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome.

scientific article published on 6 October 2016

Broad-specificity GH131 β-glucanases are a hallmark of fungi and oomycetes that colonize plants

scientific article published on 21 April 2019

CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems

scientific article

CAZyme content of Pochonia chlamydosporia reflects that chitin and chitosan modification are involved in nematode parasitism

scientific article published on 26 September 2016

Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus

scientific article

Carbohydrate-Active Enzymes Database: Principles and Classification of Glycosyltransferases

Carbohydrate-active enzymes from pigmented Bacilli: a genomic approach to assess carbohydrate utilization and degradation

scientific article

Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level

scientific article

Carbohydrate-active enzymes involved in the secondary cell wall biogenesis in hybrid aspen.

scientific article

Carbohydrate-active enzymes revealed in Coptotermes formosanus (Isoptera: Rhinotermitidae) transcriptome

scientific article

Carbohydrate-related enzymes of important Phytophthora plant pathogens

scientific article

CelS: a novel endoglucanase identified from Erwinia carotovora subsp. carotovora

scientific article

Cello-oligosaccharide oxidation reveals differences between two lytic polysaccharide monooxygenases (family GH61) from Podospora anserina

scientific article

Cellulase families revealed by hydrophobic cluster analysis

scientific article

Cellulosome-like sequences in Archaeoglobus fulgidus: an enigmatic vestige of cohesin and dockerin domains

scientific article published on December 1999

Characteristics of an exochitinase from Streptomyces olivaceoviridis, its corresponding gene, putative protein domains and relationship to other chitinases

scientific article

Characterization of a mycobacterial cellulase and its impact on biofilm- and drug-induced cellulose production

scientific article

Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels

scientific article published on 12 January 2017

Characterization of salt-adapted secreted lignocellulolytic enzymes from the mangrove fungus Pestalotiopsis sp.

scientific article published in January 2013

Characterization of the CAZy Repertoire from the Marine-Derived Fungus Stemphylium lucomagnoense in Relation to Saline Conditions

scientific article published on 09 September 2020

Characterization of the active site and thermostability regions of endoxylanase from Thermoanaerobacterium saccharolyticum B6A-RI.

scientific article

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

scholarly article

Classification of chitinases modules

scientific article

Classification of glycoside hydrolases and glycosyltransferases from hyperthermophiles

scientific article published on 01 January 2001

Cloning and characterization of a xylanase gene from corn strains of Erwinia chrysanthemi ⬇️

scientific article published in September 1996

Cloning and characterization of the bgxA gene from Erwinia chrysanthemi D1 which encodes a beta-glucosidase/xylosidase enzyme

scientific article published in February 1995

Cloning and expression in Saccharomyces cerevisiae of a Trichoderma reesei beta-mannanase gene containing a cellulose binding domain

scientific article

Cloning, sequencing and overexpression in Escherichia coli of the alginatelyase-encoding aly gene of Pseudomonas alginovora: identification of three classes of alginate lyases

scientific article published on October 1996

Closely related fungi employ diverse enzymatic strategies to degrade plant biomass

scientific article

Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi

scientific article

Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes

scientific article

Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment

scientific article published on 20 December 2017

Comparative analyses of Podospora anserina secretomes reveal a large array of lignocellulose-active enzymes

scientific article

Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes

scientific article published on 10 August 2017

Comparative analysis of carbohydrate active enzymes in Clostridium termitidis CT1112 reveals complex carbohydrate degradation ability

scientific article

Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche.

scientific article

Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

scientific article (publication date: 2011)

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

scientific article

Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain

scientific article published on 10 July 2013

Comparative genomics analysis of Lactobacillus species associated with weight gain or weight protection

scientific article published on 24 February 2014

Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists

scientific article published on 7 January 2018

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

scientific article published on 20 March 2012

Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens.

scientific article published on 11 January 2017

Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina

scientific article published on 25 February 2019

Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence

scientific article published on January 2013

Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis.

scientific article

Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum

scientific article

Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

scientific article

Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi.

scientific article published on 20 April 2018

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

scientific article

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

scientific article

Comparative genomics reveals unique wood-decay strategies and fruiting body development in the Schizophyllaceae

scientific article published on 01 August 2019

Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens

scientific article

Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis.

scientific article

Comparison of three algorithms for the assignment of secondary structure in proteins: the advantages of a consensus assignment.

scientific article published in June 1993

Complete cellulase system in the marine bacterium Saccharophagus degradans strain 2-40T.

scientific article

Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota ('Ruminococcus bicirculans') reveals two chromosomes and a selective capacity to utilize plant glucans

scientific article

Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T

scientific article

Complex carbohydrate utilization by the healthy human microbiome

scientific article

Complex pectin metabolism by gut bacteria reveals novel catalytic functions.

scientific article published on 22 March 2017

Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition.

scientific article published on 13 June 2016

Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures.

scientific article

Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613

scientific article published on 03 September 2019

Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases

scientific article

Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.

scholarly article

Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

scientific article

Correction: Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

scientific article

Correction: The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry

scientific article published on 22 December 2015

Correction: peptidoglycan: a post-genomic analysis.

scientific article published on 27 May 2014

Corrigendum: Complex pectin metabolism by gut bacteria reveals novel catalytic functions

scientific article published on 23 August 2017

Corrigendum: Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts

scientific article published on 30 July 2015

Corrigendum: Glycan complexity dictates microbial resource allocation in the large intestine

scientific article published on 5 February 2016

Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins, and pyruvate formate lyases on specific substrates

scientific article published on 10 December 2021

Cracking the code, slowly: the state of carbohydrate-active enzymes in 2013

scientific article published on 26 September 2013

Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat

scientific article

Crystal structure of Thermotoga maritima alpha-L-fucosidase. Insights into the catalytic mechanism and the molecular basis for fucosidosis

scientific article

Crystal structure of a cohesin module from Clostridium cellulolyticum: implications for dockerin recognition

scientific article

Crystal structure of a monocotyledon (maize ZMGlu1) beta-glucosidase and a model of its complex with p-nitrophenyl beta-D-thioglucoside

scientific article

Crystal structure of inactivated Thermotoga maritima invertase in complex with the trisaccharide substrate raffinose

scientific article

Crystal structures of human pancreatic alpha-amylase in complex with carbohydrate and proteinaceous inhibitors

scientific article

Crystallization and preliminary X-ray analysis of family 39 beta-D-xylosidase from Geobacillus stearothermophilus T-6.

scientific article published on 25 February 2004

Crystallization and preliminary crystallographic analysis of a thermostable family 52 beta-D-xylosidase from Geobacillus stearothermophilus T-6.

scientific article

Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.

scientific article published on 19 March 2018

Current perspectives on the families of glycoside hydrolases of Mycobacterium tuberculosis: their importance and prospects for assigning function to unknowns

scientific article

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

scientific article

De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster

scientific article published on 27 October 2015

De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads

scientific article published on 11 January 2018

De novo long-read assembly of a complex animal genome

Deciphering Genome Content and Evolutionary Relationships of Isolates from the Fungus Magnaporthe oryzae Attacking Different Host Plants

scientific article

Deciphering protein sequence information through hydrophobic cluster analysis (HCA): current status and perspectives.

scientific article published on August 1997

Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin

scientific article

Detailed kinetic analysis of a family 52 glycoside hydrolase: a beta-xylosidase from Geobacillus stearothermophilus

scientific article published in September 2003

Detection of secondary structure elements in proteins by hydrophobic cluster analysis

scientific article published in October 1992

Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

article

Development and validation of a microarray for the investigation of the CAZymes encoded by the human gut microbiome

scientific article

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

scientific article (publication date: 20 May 2011)

Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides.

scientific article published on 18 December 2017

Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts

scientific article published on 25 June 2015

Digestion of crystalline cellulose substrates by the clostridium thermocellum cellulosome: structural and morphological aspects

scientific article published on June 1999

Dimension, shape, and conformational flexibility of a two domain fungal cellulase in solution probed by small angle X-ray scattering

scientific article published on 16 August 2002

Discovery and characterization of a new family of lytic polysaccharide monooxygenases ⬇️

scientific article

Discovery of genes coding for carbohydrate-active enzyme by metagenomic analysis of lignocellulosic biomasses

scientific article published on 15 February 2017

Discovery of novel carbohydrate-active enzymes through the rational exploration of the protein sequences space

scientific article published on 08 March 2019

Display of the human mucinome with defined O-glycans by gene engineered cells

scientific article

Dissection of hexosyl- and sialyltransferase domains in the bifunctional capsule polymerases from Neisseria meningitidis W and Y defines a new sialyltransferase family

scientific article published on 23 October 2014

Divergence of Catalytic Mechanism within a Glycosidase Family Provides Insight into Evolution of Carbohydrate Metabolism by Human Gut Flora

scientific article

Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi

scientific article published on 6 December 2012

Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1

scientific article

Dividing the Large Glycoside Hydrolase Family 43 into Subfamilies: a Motivation for Detailed Enzyme Characterization

scientific article published on 4 January 2016

Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of -amylase-related proteins

article

Docking of congo red to the surface of crystalline cellulose using molecular mechanics.

scientific article

Domain evolution in the alpha-amylase family ⬇️

journal article from 'Journal of Molecular Evolution' published in 1997

Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families

scientific article

Draft Genome Sequence of Nonlabens ulvanivorans, an Ulvan-Degrading Bacterium.

scientific article

Draft Genome Sequence of Pseudoalteromonas sp. Strain PLSV, an Ulvan-Degrading Bacterium.

scientific article

Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951.

scientific article

Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga.

scientific article

Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential.

scientific article published on 07 July 2016

Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential

scientific article published on 07 July 2016

Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2.

scientific article

Draft Genome Sequences of Two Ulvan-Degrading Isolates, Strains LTR and LOR, That Belong to the Alteromonas Genus.

scientific article

Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12

scientific article

Dynamic Light Scattering Evidence for a Ligand-Induced Motion between the Two Domains of Glucoamylase G1 of Aspergillus niger with Heterobivalent Substrate Analogues

scientific article published on 01 April 1999

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

scientific article

Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors

scientific article

Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome

scientific article

Effects of dietary fiber on the feline gastrointestinal metagenome

scientific article

Effects of microbiota-directed foods in gnotobiotic animals and undernourished children

scientific article published on 01 July 2019

Emergence of a subfamily of xylanase inhibitors within glycoside hydrolase family 18

scientific article published on 01 April 2005

Endogenous cellulases in animals: isolation of beta-1, 4-endoglucanase genes from two species of plant-parasitic cyst nematodes

scientific article

Endoglucanase II (EGII) of Penicillium janthinellum: cDNA sequence, heterologous expression and promotor analysis

scientific article published on April 1996

Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus

scientific article

Enhanced whole genome sequence and annotation of Clostridium stercorarium DSM8532T using RNA-seq transcriptomics and high-throughput proteomics ⬇️

scientific article

Enzyme-catalyzed condensation reaction in a mammalian alpha-amylase. High-resolution structural analysis of an enzyme-inhibitor complex

scientific article

Enzyme-substrate complex structures of a GH39 beta-xylosidase from Geobacillus stearothermophilus

scientific article

Erratum to: Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis.

scientific article published on 6 June 2016

Erratum: Corrigendum: Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

scholarly article published in Nature Biotechnology

Erratum: Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

scientific article published on 29 September 2016

Euglena in time: Evolution, control of central metabolic processes and multi-domain proteins in carbohydrate and natural product biochemistry

article

Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants

scientific article published on March 2012

Evaluating microbiome-directed fibre snacks in gnotobiotic mice and humans

scientific article published on 23 June 2021

Evidence for a general role for high-affinity non-catalytic cellulose binding domains in microbial plant cell wall hydrolases

scientific article published on January 1994

Evidence that galactanase A from Pseudomonas fluorescens subspecies cellulosa is a retaining family 53 glycosyl hydrolase in which E161 and E270 are the catalytic residues

scientific article

Evolution and comparative genomics of the most common Trichoderma species.

scientific article published on 12 June 2019

Evolution of symbiotic bacteria in the distal human intestine

scientific article

Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

scientific article

Evolutionary and mechanistic relationships between glycosidases acting on alpha- and beta-bonds

scientific article

Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

scientific article

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

scientific article

Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota).

scientific article published on 27 January 2017

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

scientific article

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.

scientific article published on 11 September 2017

FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds

scientific article published on 26 January 2008

Families, superfamilies and subfamilies of glycosyl hydrolases

scientific article published on October 1995

Fast solubilization of recalcitrant cellulosic biomass by the basidiomycete fungus Laetisaria arvalis involves successive secretion of oxidative and hydrolytic enzymes

scientific article

Feed in summer, rest in winter: microbial carbon utilization in forest topsoil

scientific article published on 18 September 2017

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis

scientific article

First Structural Insights into  -L-Arabinofuranosidases from the Two GH62 Glycoside Hydrolase Subfamilies

scientific article

From proteins to polysaccharides: lifestyle and genetic evolution of Coprothermobacter proteolyticus

Functional Exploration of the Polysaccharide Lyase Family PL6

scientific article

Functional analysis of family GH36 α-galactosidases from Ruminococcus gnavus E1: insights into the metabolism of a plant oligosaccharide by a human gut symbiont

scientific article

Functional annotation of the Ophiostoma novo-ulmi genome: insights into the phytopathogenicity of the fungal agent of Dutch elm disease.

scientific article

Functional implications of structure-based sequence alignment of proteins in the extracellular pectate lyase superfamily

scientific article published in 1995

Functional metagenomics identifies an exosialidase with an inverting catalytic mechanism that defines a new glycoside hydrolase family (GH156)

scientific article published in Journal of Biological Chemistry

Functional metagenomics reveals novel pathways of prebiotic breakdown by human gut bacteria

scientific article

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes

scientific article

Galactosaminogalactan activates the inflammasome to provide host protection

scientific article published on 02 December 2020

Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters

scientific article published on 29 August 2017

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

scientific article

Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota

scientific article published on 10 October 2013

Genetic determinants of endophytism in the Arabidopsis root mycobiome

scientific article published on 10 December 2021

Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides

scientific article published on October 2015

Genome Assembly of the Fungus Cochliobolus miyabeanus, and Transcriptome Analysis during Early Stages of Infection on American Wildrice (Zizania palustris L.).

scientific article

Genome Sequence of the Cellulolytic Gliding Bacterium Cytophaga hutchinsonii

scientific article

Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters

scientific article published in Scientific Reports

Genome analyses highlight the different biological roles of cellulases

scientific article published on 23 January 2012

Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging

scientific article

Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels

scientific article published on 2 June 2015

Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen

scientific article

Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

scientific article

Genome of the red alga Porphyridium purpureum

scientific article

Genome sequence and transcriptome analyses of the thermophilic zygomycete fungus Rhizomucor miehei

scientific article

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

scientific article published on 8 October 2012

Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

scientific article

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

scientific article

Genome sequence of the model medicinal mushroom Ganoderma lucidum

scientific article

Genome sequence of the model mushroom Schizophyllum commune

scientific article

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

scientific article

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

scientific article

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

scientific article

Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions

scientific article published on 23 March 2020

Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae.

scientific article published on 24 December 2013

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

scholarly article

Genome-wide analysis of acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system

scientific article

Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay.

scientific article

Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea

scientific article

Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut

scientific article

Genomic and proteomic analyses of the agarolytic system expressed by Saccharophagus degradans 2-40.

scientific article

Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment

scientific article

Genomic evaluation of Thermoanaerobacter spp. for the construction of designer co-cultures to improve lignocellulosic biofuel production

scientific article published in 2013

Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

scientific article

Genomic insights from Monoglobus pectinilyticus: a pectin-degrading specialist bacterium in the human colon

scientific article published on 06 February 2019

Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk.

scientific article

Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

scientific article

Glycan complexity dictates microbial resource allocation in the large intestine

scientific article published on 26 June 2015

Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies

scientific article published on 18 May 2016

Glycogen metabolism loss: a common marker of parasitic behaviour in bacteria?

scientific article published on 01 September 2002

Glycosidase active site mutations in human alpha-L-iduronidase.

scientific article published on September 2001

Glycosidase families

scientific article published on 01 May 1998

Glycoside hydrolases and glycosyltransferases. Families, modules, and implications for genomics

scientific article

Glycoside hydrolases and glycosyltransferases: families and functional modules

scientific article

Glycosyltransferase genes that cause monogenic congenital disorders of glycosylation are distinct from glycosyltransferase genes associated with complex diseases.

scientific article published on 22 March 2018

Glycosyltransferases, glycoside hydrolases: surprise, surprise!

scientific article published on October 2008

Glycosyltransferases: structures, functions, and mechanisms

scientific article (publication date: 2008)

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

scientific article

Growth of Azospirillum irakense KBC1 on the aryl beta-glucoside salicin requires either salA or salB.

scientific article

Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children

scientific article

Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides

scientific article published on 02 February 2022

Gut microbiota and digestion of polysaccharides

scientific article

Gut microbiota from twins discordant for obesity modulate metabolism in mice

scientific article (publication date: 6 September 2013)

Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults

scientific article published on 31 July 2015

HCABAND: a computer program for the 2D-helical representation of protein sequences

scientific article published in January 1990

Hidden domains and active site residues in beta-glycanase-encoding gene sequences?

scientific article published on March 1993

High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis

scientific article

High resolution X-ray crystallography shows that ascorbate is a cofactor for myrosinase and substitutes for the function of the catalytic base

scientific article

Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen

scientific article

How a Glycoside Hydrolase Recognizes a Helical Polyglucan

scientific article published in September 2017

How do gut microbes break down dietary fiber?

scientific article published on 05 March 2014

How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans

scientific article

How nature can exploit nonspecific catalytic and carbohydrate binding modules to create enzymatic specificity

scientific article

Human glucocerebrosidase: heterologous expression of active site mutants in murine null cells

scientific article

Hydrophobic cluster analysis of the primary sequences of alpha-amylases

scientific article published in August 1989

Hydrophobic-cluster analysis of plant protein sequences. A domain homology between storage and lipid-transfer proteins

scientific article published on November 1988

Identification of Copper-Containing Oxidoreductases in the Secretomes of Three <i>Colletotrichum</i> Species with a Focus on Copper Radical Oxidases for the Biocatalytic Production of Fatty Aldehydes

scientific article published on 06 October 2021

Identification of Euglena gracilis β-1,3-glucan phosphorylase and establishment of a new glycoside hydrolase (GH) family GH149.

scientific article published on 9 January 2018

Identification of a GH110 subfamily of alpha 1,3-galactosidases: novel enzymes for removal of the alpha 3Gal xenotransplantation antigen.

scientific article

Identification of an essential glutamate residue in the active site of endoglucanase III from Trichoderma reesei.

scientific article

Identification of candidate active site residues in lysosomal beta-hexosaminidase A.

scientific article published on January 1997

Identification of the catalytic nucleophile of the family 29 alpha-L-fucosidase from Thermotoga maritima through trapping of a covalent glycosyl-enzyme intermediate and mutagenesis

scientific article published on 15 September 2003

Identification of the catalytic residues in family 52 glycoside hydrolase, a beta-xylosidase from Geobacillus stearothermophilus T-6.

scientific article published on 8 May 2003

Identification of the catalytic residues of the first family of beta(1-3)glucanosyltransferases identified in fungi

scientific article

Identification of the galactosyltransferase of Cryptococcus neoformans involved in the biosynthesis of basidiomycete-type glycosylinositolphosphoceramide

scientific article published on 06 August 2013

Imaging the enzymatic digestion of bacterial cellulose ribbons reveals the endo character of the cellobiohydrolase Cel6A from Humicola insolens and its mode of synergy with cellobiohydrolase Cel7A.

scientific article

Influenza B virus neuraminidase can synthesize its own inhibitor

scientific article

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

scientific article published on 28 March 2012

Insights into exo- and endoglucanase activities of family 6 glycoside hydrolases from Podospora anserina

scientific article published on 03 May 2013

Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725

scientific article

Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus

scientific article published on 13 June 2008

Insights on the evolution of mycoparasitism from the genome of Clonostachys rosea

scientific article

Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease

scientific article

Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass

scientific article published on 23 July 2018

Interspecies Competition Impacts Targeted Manipulation of Human Gut Bacteria by Fiber-Derived Glycans

scientific article published on 01 September 2019

Intrinsic dynamic behavior of enzyme:substrate complexes govern the catalytic action of β-galactosidases across clan GH-A

scientific article published on 17 July 2019

Investigating Host Microbiota Relationships Through Functional Metagenomics

scientific article published on 07 June 2019

Investigating host-microbiome interactions by droplet based microfluidics

scientific article published on 01 October 2020

Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

article

Key challenges for the creation and maintenance of specialist protein resources

scientific article

Klotho is a novel beta-glucuronidase capable of hydrolyzing steroid beta-glucuronides

scientific article

Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits

scientific article published on 12 October 2020

Larvae of longhorned beetles (Coleoptera; Cerambycidae) have evolved a diverse and phylogenetically conserved array of plant cell wall degrading enzymes

scientific article published on 12 May 2021

Leveraging single-cell genomics to expand the fungal tree of life

scientific article published on 08 October 2018

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

scientific article

Localization of synthesis of beta1,6-glucan in Saccharomyces cerevisiae

scientific article

Lytic xylan oxidases from wood-decay fungi unlock biomass degradation

scientific article

MANSEK and SUNHCA. Two interactive programs for the hydrophobic cluster analysis of protein sequences.

scientific article published in February 1993

Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi

scientific article published in 2023

Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.

scientific article published on 9 April 2018

Membrane association is a determinant for substrate recognition by PMT4 protein O-mannosyltransferases

scholarly article

Metabolic Roles of Uncultivated Bacterioplankton Lineages in the Northern Gulf of Mexico "Dead Zone".

scientific article published on 12 September 2017

Metabolic reconstruction for metagenomic data and its application to the human microbiome

scientific article published in 2012

Metagenomic Assembly and Prokaryotic Metagenome-Assembled Genome Sequences from the Northern Gulf of Mexico "Dead Zone"

scientific article published on 06 September 2018

Metagenomics unveils the attributes of the alginolytic guilds of sediments from four distant cold coastal environments

scientific article published on 27 June 2016

Microbial community function and biomarker discovery in the human microbiome

scientific article published on 19 September 2011

Microbial community function and biomarker discovery in the human microbiome

Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut

scientific article published on 13 November 2020

Mimivirus shows dramatic genome reduction after intraamoebal culture

scientific article

Mining for hemicellulases in the fungus-growing termite Pseudacanthotermes militaris using functional metagenomics

scientific article

Modulation of cellulosome composition in Clostridium cellulolyticum: adaptation to the polysaccharide environment revealed by proteomic and carbohydrate-active enzyme analyses

scientific article published on 01 February 2010

Molecular basis for galactosylation of core fucose residues in invertebrates: identification of caenorhabditis elegans N-glycan core alpha1,6-fucoside beta1,4-galactosyltransferase GALT-1 as a member of a novel glycosyltransferase family

scientific article published on 26 October 2009

Mucolipidosis II is caused by mutations in GNPTA encoding the alpha/beta GlcNAc-1-phosphotransferase

scientific article

Multi-omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring

scientific article published on 06 August 2019

Multidomain architecture of beta-glycosyl transferases: implications for mechanism of action

scientific article

Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes

scientific article

Mycobacterium tuberculosis Rv1090 and Rv1987 encode functional β-glucan-targeting proteins

scientific journal article

Mycobacterium tuberculosis complex mycobacteria as amoeba-resistant organisms

scientific article published in 2011

Mycobacterium tuberculosis strains possess functional cellulases

scientific journal article

Mycobacterium ulcerans mycolactones-fungi crosstalking

scientific article published on 28 February 2019

New families in the classification of glycosyl hydrolases based on amino acid sequence similarities

scientific article

Niche differentiation and evolution of the wood decay machinery in the invasive fungus Serpula lacrymans ⬇️

scientific article published on 19 October 2020

Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation

scientific article published on 21 July 2017

Nomenclature for sugar-binding subsites in glycosyl hydrolases

scientific article (publication date: 15 January 1997)

Novel carbohydrate binding modules in the surface anchored α-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.

scientific article

Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis ⬇️

scientific article published on 28 August 2009

Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids

scientific article published on 28 November 2018

Nucleotide sequence of the engXCA gene encoding the major endoglucanase of Xanthomonas campestris pv. campestris

scientific article published on April 1990

Nucleotide sequences of the arb genes, which control beta-glucoside utilization in Erwinia chrysanthemi: comparison with the Escherichia coli bgl operon and evidence for a new beta-glycohydrolase family including enzymes from eubacteria, archeabacte

scientific article

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

scientific article

Optimized mixtures of recombinant Humicola insolens cellulases for the biodegradation of crystalline cellulose

scientific article

Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins

scientific article

PULDB: the expanded database of Polysaccharide Utilization Loci

scientific article published on 27 October 2017

Pan-Cellulosomics of Mesophilic Clostridia: Variations on a Theme

scientific article

Paradoxical conservation of a set of three cellulose-targeting genes in Mycobacterium tuberculosis complex organisms

scientific article published on 11 February 2010

Parallel substrate binding sites in a beta-agarase suggest a novel mode of action on double-helical agarose

scientific article

Parallel-up structure evidences the molecular directionality during biosynthesis of bacterial cellulose

scientific article published on August 1997

Peptidoglycan: a post-genomic analysis

scientific article

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle

scientific article published on 12 November 2018

Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice

scientific article

Plant proteinaceous inhibitors of carbohydrate-active enzymes

article

Podospora anserina hemicellulases potentiate the Trichoderma reesei secretome for saccharification of lignocellulosic biomass

scientific article

Poplar carbohydrate-active enzymes. Gene identification and expression analyses

scientific article published on 13 January 2006

Poplar carbohydrate-active enzymes: whole-genome annotation and functional analyses based on RNA expression data

scientific article published on 01 July 2019

Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis

scientific article

Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae

scientific article published on March 2009

Processing and hydrolytic mechanism of the cgkA-encoded kappa-carrageenase of Alteromonas carrageenovora

scientific article

Production of α-1,3-L-arabinofuranosidase active on substituted xylan does not improve compost degradation by Agaricus bisporus

scientific article published on 24 July 2018

Protein disorder: conformational distribution of the flexible linker in a chimeric double cellulase

scientific article

Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber

scientific article published on 14 September 2020

Proteomic Dissection of the Cellulolytic Machineries Used by Soil-Dwelling

Publisher Correction: Galactosaminogalactan activates the inflammasome to provide host protection

scientific article published on 21 December 2020

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

scientific article

Quantitative trait loci and comparative genomics of cereal cell wall composition

scientific article published in May 2003

RETRACTED ARTICLE: Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition

scientific article published on 17 May 2016 and retracted on 30 October 2023

Rapid Divergence of Genome Architectures Following the Origin of an Ectomycorrhizal Symbiosis in the Genus Amanita

scholarly article by Jaqueline Hess published in November 2018

Reading-frame shift in Saccharomyces glucoamylases restores catalytic base, extends sequence and improves alignment with other glucoamylases

scientific article published on 01 November 1994

Recent structural insights into the expanding world of carbohydrate-active enzymes

scientific article

Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts

scientific article

Recognition of the Helical Structure of  -1,4-Galactan by a New Family of Carbohydrate-binding Modules

scientific article

Role of glycoside phosphorylases in mannose foraging by human gut bacteria

scientific article published on 16 September 2013

Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains.

scientific article

Sequence homology between a beta-galactosidase and some beta-glucosidases

scientific article published in July 1991

Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production

scientific article

Serratia marcescens chitobiase is a retaining glycosidase utilizing substrate acetamido group participation

scientific article

Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus

scientific article published on 16 June 2015

Signature active site architectures illuminate the molecular basis for ligand specificity in family 35 carbohydrate binding module

scientific article

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

scientific article published on 22 January 2018

Single-domain flavoenzymes trigger lytic polysaccharide monooxygenases for oxidative degradation of cellulose

scientific article

Solution structure of the module X2 1 of unknown function of the cellulosomal scaffolding protein CipC of Clostridium cellulolyticum

scientific article

Specificity mapping of cellulolytic enzymes: classification into families of structurally related proteins confirmed by biochemical analysis

scientific article published on October 1992

Starch- and glycogen-debranching and branching enzymes: prediction of structural features of the catalytic (beta/alpha)8-barrel domain and evolutionary relationship to other amylolytic enzymes ⬇️

journal article from 'Journal of Protein Chemistry' published in 1993

Stereochemical course and reaction products of the action of beta-xylosidase from Thermoanaerobacterium saccharolyticum strain B6A-RI.

scientific article published in March 1996

Stereochemical course of the hydrolysis reaction catalyzed by chitinases A1 and D from Bacillus circulans WL-12.

scientific article

Stereochemistry of chitin hydrolysis by a plant chitinase/lysozyme and X-ray structure of a complex with allosamidin: evidence for substrate assisted catalysis

scientific article

Stereochemistry of the hydrolysis reaction catalyzed by endoglucanase Z from Erwinia chrysanthemi.

scientific article published in March 1992

Stereochemistry, specificity and kinetics of the hydrolysis of reduced cellodextrins by nine cellulases

scientific article published on 01 November 1993

Streptomyces matensis laminaripentaose hydrolase is an 'inverting' beta-1,3-glucanase

scientific article published in June 2001

Structural Dynamics and Catalytic Properties of a Multimodular Xanthanase

Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates.

scientific article

Structural and functional relationships in two families of beta-1,4-glycanases

scientific article

Structural and sequence-based classification of glycoside hydrolases

scientific article (publication date: October 1997)

Structural basis for carbohydrate binding properties of a plant chitinase-like agglutinin with conserved catalytic machinery

scientific article

Structural determinants of substrate specificity in family 1 beta-glucosidases: novel insights from the crystal structure of sorghum dhurrinase-1, a plant beta-glucosidase with strict specificity, in complex with its natural substrate

scientific article published on 17 May 2004

Structural enzymology of carbohydrate-active enzymes: implications for the post-genomic era.

scientific article

Structural features of normal and mutant human lysosomal glycoside hydrolases deduced from bioinformatics analysis

scientific article

Structural homology among the peroxidase enzyme family revealed by hydrophobic cluster analysis

scientific article published in January 1990

Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2.

scientific article published on 24 November 2016

Structural organization and a standardized nomenclature for plant endo-1,4-beta-glucanases (cellulases) of glycosyl hydrolase family 9.

scientific article published in August 2007

Structure and boosting activity of a starch-degrading lytic polysaccharide monooxygenase ⬇️

scientific article

Structure of a polyisoprenoid binding domain from Saccharophagus degradans implicated in plant cell wall breakdown

scientific article

Structure of the Fusarium oxysporum endoglucanase I with a nonhydrolyzable substrate analogue: substrate distortion gives rise to the preferred axial orientation for the leaving group

scientific article

Structure-Function Analysis of a Mixed-linkage β-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B(1)4.

scientific article

Structure-based multiple alignment of extracellular pectate lyase sequences

scientific article published in March 1995

Structure-function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family

scientific article

Structures and mechanisms of glycosyl hydrolases

scientific article (publication date: 15 September 1995)

Structures of oligosaccharide-bound forms of the endoglucanase V from Humicola insolens at 1.9 A resolution

scientific article

Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74

scientific article published on 19 July 2019

Sucrose 6-phosphate phosphorylase: a novel insight in the human gut microbiome

scientific article published on 26 March 2019

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi.

scientific article

Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion

scientific article published on 01 March 2018

The 2008 update of the Aspergillus nidulans genome annotation: a community effort

scientific article

The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity

scientific article

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

scientific article

The Enzymatic Synthesis of Glycosidic Bonds: "Glycosynthases" and Glycosyltransferases

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

scientific article

The Mechanism by Which Arabinoxylanases Can Recognize Highly Decorated Xylans

scientific article

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

scientific article

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

scientific article

The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity toward β-Glucans

scientific article published on 11 January 2016

The Structure of a Streptomyces avermitilis  -L-Rhamnosidase Reveals a Novel Carbohydrate-binding Module CBM67 within the Six-domain Arrangement

scientific article

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

scientific article published in 2013

The adsorption of a bacterial cellulase and its two isolated domains to crystalline cellulose ⬇️

scientific article published on April 5, 1992

The carbohydrate-active enzymes database (CAZy) in 2013

scientific article (publication date: 2014)

The celA gene, encoding a glycosyl hydrolase family 3 beta-glucosidase in Azospirillum irakense, is required for optimal growth on cellobiosides

scientific article

The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria

scientific article published on 30 November 2016

The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms)

scientific article

The convergence of carbohydrate active gene repertoires in human gut microbes

scholarly article

The crystal structure of the family 6 carbohydrate binding module from Cellvibrio mixtus endoglucanase 5a in complex with oligosaccharides reveals two distinct binding sites with different ligand specificities.

scientific article published on 08 March 2004

The crystal structures of Sinapis alba myrosinase and a covalent glycosyl-enzyme intermediate provide insights into the substrate recognition and active-site machinery of an S-glycosidase

scientific article

The cyst-dividing bacterium Ramlibacter tataouinensis TTB310 genome reveals a well-stocked toolbox for adaptation to a desert environment

scientific article published in 2011

The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi.

scientific article

The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted β-1,4 endoglucanase that plays a key role in symbiosis development.

scientific article published on 6 April 2018

The family 6 carbohydrate binding module CmCBM6-2 contains two ligand-binding sites with distinct specificities.

scientific article

The gene encoding the kappa-carrageenase of Alteromonas carrageenovora is related to beta-1,3-1,4-glucanases

scientific article published in February 1994

The gene glvA of Bacillus subtilis 168 encodes a metal-requiring, NAD(H)-dependent 6-phospho-alpha-glucosidase. Assignment to family 4 of the glycosylhydrolase superfamily

scientific article

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

scientific article

The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion

scientific article

The genome of Xylona heveae provides a window into fungal endophytism

scientific article published on 22 October 2015

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

scientific article

The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. ⬇️

scientific article published on 10 June 2016

The genome sequence of the model ascomycete fungus Podospora anserina

scientific article

The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry

scientific article

The human gut microbe Bacteroides thetaiotaomicron encodes the founding member of a novel glycosaminoglycan-degrading polysaccharide lyase family PL29

scientific article published on 27 September 2018

The identification and molecular characterization of the first archaeal bifunctional exo-β-glucosidase/N-acetyl-β-glucosaminidase demonstrate that family GH116 is made of three functionally distinct subfamilies

scientific article published on 21 September 2013

The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins

scientific article published in October 2011

The iota-carrageenase of Alteromonas fortis. A beta-helix fold-containing enzyme for the degradation of a highly polyanionic polysaccharide

scientific article

The kappa-carrageenase of P. carrageenovora features a tunnel-shaped active site: a novel insight in the evolution of Clan-B glycoside hydrolases

scientific article

The kappa-carrageenase of the marine bacterium Cytophaga drobachiensis. Structural and phylogenetic relationships within family-16 glycoside hydrolases

scientific article published in May 1998

The location of the ligand-binding site of carbohydrate-binding modules that have evolved from a common sequence is not conserved

scientific article

The mechanism of substrate (aglycone) specificity in beta -glucosidases is revealed by crystal structures of mutant maize beta -glucosidase-DIMBOA, -DIMBOAGlc, and -dhurrin complexes

scientific article

The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases.

scientific article

The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases

scientific article

The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet

article

The third chitinase gene (chiC) of Serratia marcescens 2170 and the relationship of its product to other bacterial chitinases

scientific article published on November 1999

The three-dimensional structure of invertase (beta-fructosidase) from Thermotoga maritima reveals a bimodular arrangement and an evolutionary relationship between retaining and inverting glycosidases

scientific article

The three-dimensional structures of two beta-agarases

scientific article

The transcriptome of Euglena gracilis reveals unexpected metabolic capabilities for carbohydrate and natural product biochemistry.

scientific article published on 20 August 2015

The yeast Geotrichum candidum encodes functional lytic polysaccharide monooxygenases

scientific article published on 12 September 2017

The α-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115).

scientific article published on 26 March 2011

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

scientific article

Three-Dimensional Structures of UDP-Sugar Glycosyltransferases Illuminate the Biosynthesis of Plant Polysaccharides

article

Towards a classification of glycosyltransferases based on amino acid sequence similarities: prokaryotic alpha-mannosyltransferases

scientific article published on August 1996

Transcriptome analysis of Stagonospora nodorum: gene models, effectors, metabolism and pantothenate dispensability

scientific article published on 6 December 2011

Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi

scientific article published on 22 March 2019

Tropheryma whipplei glycosylation in the pathophysiologic profile of Whipple's disease

scientific article

Understanding plant cell-wall remodelling during the symbiotic interaction between Tuber melanosporum and Corylus avellana using a carbohydrate microarray

scientific article

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii

scientific article

Unique organization and unprecedented diversity of the Bacteroides (Pseudobacteroides) cellulosolvens cellulosome system

scientific article published on 7 September 2017

Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis.

scientific article

Unraveling the subtleties of β-(1→3)-glucan phosphorylase specificity in the GH94, GH149, and GH161 glycoside hydrolase families

scientific article published on 28 February 2019

Unusual active site location and catalytic apparatus in a glycoside hydrolase family.

scientific article published on 10 April 2017

Updating the sequence-based classification of glycosyl hydrolases

scientific article

Utilisation of mucin glycans by the human gut symbiont Ruminococcus gnavus is strain-dependent

scientific article

VaZyMolO: a tool to define and classify modularity in viral proteins

scientific article published in March 2005

Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes

scientific article

Viral RNA-polymerases -- a predicted 2'-O-ribose methyltransferase domain shared by all Mononegavirales

scientific article published on May 2002

Visual Comparative Omics of Fungi for Plant Biomass Deconstruction

scientific article published on 24 August 2016

Visualization of the adsorption of a bacterial endo-beta-1,4-glucanase and its isolated cellulose-binding domain to crystalline cellulose

scientific article published on 01 December 1993

Why are there so many carbohydrate-active enzyme-related genes in plants?

scientific article published in December 2003

X4 modules represent a new family of carbohydrate-binding modules that display novel properties

scientific article

Xylan degradation by the human gut Bacteroides xylanisolvens XB1A(T) involves two distinct gene clusters that are linked at the transcriptional level

scientific article

[Bacterial glycosidases for the production of universal blood]

scientific article published on 01 August 2007

iota-Carrageenases constitute a novel family of glycoside hydrolases, unrelated to that of kappa-carrageenases

scientific article

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