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List of works by Łukasz Jaroszewski

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The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

scientific article published in March 2007
Comparison of sequence profiles. Strategies for structural predictions using sequence information

scientific article published on February 2000
FFAS03: a server for profile--profile sequence alignments

scientific article
Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline

scientific article
The importance of alignment accuracy for molecular replacement.

scientific article published on 22 June 2004
Three-dimensional structural view of the central metabolic network of Thermotoga maritima

scientific article
Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R.

scientific article
Exploration of uncharted regions of the protein universe

scientific article published in September 2009
Derivation and testing of pair potentials for protein folding. When is the quasichemical approximation correct?

scientific article published on March 1997
PSI-2: structural genomics to cover protein domain family space

scientific article
The challenge of protein structure determination--lessons from structural genomics

scientific article
Improving the quality of twilight-zone alignments

scientific article
Fold prediction by a hierarchy of sequence, threading, and modeling methods

scientific article published on June 1998
Tyrosine phosphorylation of VHR phosphatase by ZAP-70

scientific article
Structure of the γ- D -glutamyl- L -diamino acid endopeptidase YkfC from Bacillus cereus in complex with L -Ala-γ- D -Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases

scientific article
Structural Basis of Murein Peptide Specificity of a γ-D-Glutamyl-L-Diamino Acid Endopeptidase

scientific article
Crystal Structure of the Human N-Myc Downstream-regulated Gene 2 Protein Provides Insight into Its Role as a Tumor Suppressor

scientific article
Crystal structure of the global regulatory protein CsrA from Pseudomonas putida at 2.05 A resolution reveals a new fold

scientific article published in November 2005
Crystal structure of thy1, a thymidylate synthase complementing protein from Thermotoga maritima at 2.25 A resolution

scientific article
Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization

scientific article
Structural Basis of Membrane Targeting by the Dock180 Family of Rho Family Guanine Exchange Factors (Rho-GEFs)

scientific article
Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif

scientific article
Crystal Structure of the First Eubacterial Mre11 Nuclease Reveals Novel Features that May Discriminate Substrates During DNA Repair

scientific article
Improving the chances of successful protein structure determination with a random forest classifier

scientific article
A Distinct Type of Pilus from the Human Microbiome

scientific article
Identification and structural characterization of heme binding in a novel dye-decolorizing peroxidase, TyrA

scientific article
Crystal structure of a PIN (PilT N-terminus) domain (AF0591) from Archaeoglobus fulgidus at 1.90 A resolution

scientific article
Crystal structure of an iron-containing 1,3-propanediol dehydrogenase (TM0920) from Thermotoga maritima at 1.3 A resolution

scientific article
Crystal structure of acireductone dioxygenase (ARD) from Mus musculus at 2.06 angstrom resolution

scientific article
Crystal structure of a tandem cystathionine-beta-synthase (CBS) domain protein (TM0935) from Thermotoga maritima at 1.87 A resolution

scientific article
Crystal structure of the Fic (Filamentation induced by cAMP) family protein SO4266 (gi|24375750) from Shewanella oneidensis MR-1 at 1.6 Å resolution

scientific article
Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron

scientific article
Bacterial Pleckstrin Homology Domains: A Prokaryotic Origin for the PH Domain

scientific article
Structures of a Bifunctional Cell Wall Hydrolase CwlT Containing a Novel Bacterial Lysozyme and an NlpC/P60 dl-Endopeptidase

scientific article
AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction

scientific article
Insights into Substrate Specificity of NlpC/P60 Cell Wall Hydrolases Containing Bacterial SH3 Domains

scientific article published on 15 September 2015
Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution

scientific article
UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex

scientific article published on 24 March 2016
Crystal structure of an Udp-n-acetylmuramate-alanine ligase MurC (TM0231) from Thermotoga maritima at 2.3 A resolution

scientific article published in June 2004
Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 A resolution

scientific article
Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes

scientific article
The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role

scientific article
Structural Analysis of Papain-Like NlpC/P60 Superfamily Enzymes with a Circularly Permuted Topology Reveals Potential Lipid Binding Sites

scientific article
Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution

scientific article published in July 2004
Genome pool strategy for structural coverage of protein families

scientific article
Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 A resolution

scientific article published in March 2004
A segment alignment approach to protein comparison

scientific article
Crystal structure of gamma-glutamyl phosphate reductase (TM0293) from Thermotoga maritima at 2.0 A resolution

scientific article
Crystal structure of a type II quinolic acid phosphoribosyltransferase (TM1645) from Thermotoga maritima at 2.50 A resolution.

scientific article published in May 2004
Insights into Substrate Specificity of Geranylgeranyl Reductases Revealed by the Structure of Digeranylgeranylglycerophospholipid Reductase, an Essential Enzyme in the Biosynthesis of Archaeal Membrane Lipids

scientific article

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