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List of works by Maryann E. Martone

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3.

scientific article

A Data Citation Roadmap for Scholarly Data Repositories ⬇️

journal article from 'bioRxiv' published in 2016

A Data Citation Roadmap for Scientific Publishers

A Model-Based Mediator System for Scientific Data Management

article

A Unified Research Resource Layer; Experiences from the Neuroscience Information Framework

A cell-centered database for electron tomographic data

scientific article

A comparative antibody analysis of pannexin1 expression in four rat brain regions reveals varying subcellular localizations

scientific article published on 6 February 2013

A data citation roadmap for scholarly data repositories

scientific article published on 10 April 2019

A data citation roadmap for scientific publishers ⬇️

journal article from 'Scientific Data' published in 2018

A formal ontology of subcellular neuroanatomy

scientific article published on 2 November 2007

A guide to the BRAIN Initiative Cell Census Network data ecosystem

A hybrid human and machine resource curation pipeline for the Neuroscience Information Framework

scientific article published on 20 March 2012

A knowledge based approach to matching human neurodegenerative disease and animal models

scientific article published on 14 May 2013

A neuroscience gateway

scholarly article published 2013

A spatial framework for multi-scale computational neuroanatomy

A survey of the neuroscience resource landscape: perspectives from the neuroscience information framework

scientific article (publication date: 2012)

A tool for assessing alignment of biomedical data repositories with open, FAIR, citation and trustworthy principles

scientific article published on 09 July 2021

Activities of the US INCF Node

Addendum: The FAIR Guiding Principles for scientific data management and stewardship

article by Mark D Wilkinson et al published 19 March 2019 in Scientific Data

Alterations of hippocampal postsynaptic densities following transient ischemia

scientific article

Alterations of hippocampal postsynaptic densities following transient ischemia

An assessment of verbal recall, recognition and fluency abilities in patients with Huntington's disease

scientific article published on March 1986

An ontological approach to describing neurons and their relationships

scientific article (publication date: 2012)

Antibody Watch: Text mining antibody specificity from the literature

scientific article published on 27 May 2021

Apoptosis and oncosis in the early progression of left ventricular dysfunction in the cardiomyopathic hamster

scientific article published in January 2002

Application of neuroanatomical ontologies for neuroimaging data annotation

scientific article (publication date: 2010)

Assessing value of biomedical digital repositories

Assessing value of biomedical digital repositories

Assessing value of biomedical digital repositories

Assessing value of biomedical digital repositories

AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures

scientific article published on 26 July 2023

Automated most-probable loss tomography of thick selectively stained biological specimens with quantitative measurement of resolution improvement

scientific article published in December 2004

Big data from small data: data-sharing in the 'long tail' of neuroscience

scientific article

Biological imaging software tools

scientific article published on 28 June 2012

Biomedical informatics research network: building a national collaboratory to hasten the derivation of new understanding and treatment of disease

scientific article published on January 2005

Brain and Behavior: we want you to share your data

scientific article (publication date: 2014)

Challenges and opportunities in mining neuroscience data

scientific article

Changing the Culture on Data Management and Sharing: Overview and Highlights from a Workshop Held by the National Academies of Sciences, Engineering, and Medicine

scientific article published in 2022

Collaborative development of the Arrowsmith two node search interface designed for laboratory investigators

scientific article

Community feedback on scholarly content: why it is important and why it should be preserved

Comparative analysis of knowledge representation and reasoning requirements across a range of life sciences textbooks

scientific article

Computerized detection and segmentation of mitochondria on electron microscope images

scientific article

Connecting connectomes

scientific article (publication date: October 2013)

ContentMine/Hypothes.is Proposal

scientific article

Continuous amphetamine administration induces tyrosine hydroxylase immunoreactive patches in the adult rat neostriatum

scientific article

Conversation with Dr. Lawrence Tabak and Dr. Lyric Jorgenson on the NIH Perspective on Data Sharing and Management

scientific article published in 2022

Correction: Digital Atlasing and Standardization in the Mouse Brain.

scientific article published on 11 February 2011

Data federation in the Biomedical Informatics Research Network: tools for semantic annotation and query of distributed multiscale brain data

scientific article

Data integration in eHealth: a domain/disease specific roadmap.

scientific article

Data sharing in psychology

scientific article published on 01 February 2018

Database resources for cellular electron microscopy

scientific article published in January 2007

Development and use of Ontologies Inside the Neuroscience Information Framework: A Practical Approach

scientific article (publication date: 2012)

Dicer and eIF2c are enriched at postsynaptic densities in adult mouse brain and are modified by neuronal activity in a calpain-dependent manner

scientific article published in August 2005

Digital atlasing and standardization in the mouse brain

scientific article

Dimensionality Reduction on Multi-Dimensional Transfer Functions for Multi-Channel Volume Data Sets

scientific article

Disruption of dendritic translation of CaMKIIalpha impairs stabilization of synaptic plasticity and memory consolidation

scientific article published in October 2002

Distribution of Kv3.3 potassium channel subunits in distinct neuronal populations of mouse brain

scientific article published on June 2007

E-neuroscience: challenges and triumphs in integrating distributed data from molecules to brains

scientific article

ER-to-Golgi carriers arise through direct en bloc protrusion and multistage maturation of specialized ER exit domains

scientific article published on October 2003

Electron tomographic analysis of synaptic ultrastructure

scientific article

Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging

scientific article published on 07 February 2019

Evidence for ectopic neurotransmission at a neuronal synapse ⬇️

scientific article

Examination of the relationship between astrocyte morphology and laminar boundaries in the molecular layer of adult dentate gyrus

scientific article published in July 2003

Exploring Mammalian Brain Connectivity using NeuroLex

FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research

scientific article published on 06 December 2019

FORCE11: Building the Future for Research Communications and e-Scholarship

scientific article (publication date: July 2015)

Federated access to heterogeneous information resources in the Neuroscience Information Framework (NIF)

scientific article

Filamentous actin is concentrated in specific subpopulations of neuronal and glial structures in rat central nervous system

scientific article published in December 2001

High-resolution large-scale mosaic imaging using multiphoton microscopy to characterize transgenic mouse models of human neurological disorders.

scientific article published in January 2006

IMPLEMENTING WEB DIGITAL ANNOTATION FOR GLOBAL STEM EDUCATION AND COLLABORATION

Identifying research resources in biomedical literature should be easy

article by Anita Bandrowski et al published 2014 in Frontiers in Neuroinformatics

Immunolocalization of the receptor tyrosine kinase EphA4 in the adult rat central nervous system.

scientific article published on October 1997

Improving Transparency and Scientific Rigor in Academic Publishing

Improving transparency and scientific rigor in academic publishing

Improving transparency and scientific rigor in academic publishing

scientific article published on 02 December 2018

Improving transparency and scientific rigor in academic publishing

Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines

Integration of evidence across human and model organism studies: A meeting report

scientific article published on 24 April 2021

Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies

scientific article (publication date: 2014)

Interoperability across neuroscience databases

scientific article published on January 2007

Issue Information.

scientific article published on 13 January 2014

Issue Information.

scientific article published on 24 November 2014

Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework

scientific article

Large-scale biomedical image analysis in grid environments

scientific article published on March 2008

Light and electron microscopic localization of multiple proteins using quantum dots

scientific article

MON-176 Making Informed Decisions on the Selection of Antibodies Using dkNET (NIDDK Information Network).

scientific article published on 30 April 2019

Maturation of astrocyte morphology and the establishment of astrocyte domains during postnatal hippocampal development.

scientific article published in April 2004

Method: automatic segmentation of mitochondria utilizing patch classification, contour pair classification, and automatically seeded level sets

scientific article

Multi-Channel Transfer Function with Dimensionality Reduction

scientific article

Multiscale imaging characterization of dopamine transporter knockout mice reveals regional alterations in spine density of medium spiny neurons

scientific article

NeuroLex.org: an online framework for neuroscience knowledge

scientific article (publication date: 2013)

Neuroanatomical domain of the foundational model of anatomy ontology.

scientific article published on 08 January 2014

Neuron

Neuroscience Information Framework (NIF)

Neuroscience Information Framework (NIF)

Ontologies for Neuroscience: What are they and What are they Good for?

scientific article published in May 2009

Ontology driven data integration for autism research

scholarly article published August 2009

Orchestration of web services in the NIF project: using the Kepler workflow engine for data fusion

Potassium channel subunit Kv3.2 and the water channel aquaporin-4 are selectively localized to cerebellar pinceau

scientific journal article

Protein ubiquitination in postsynaptic densities after transient cerebral ischemia

scientific article

Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains

scientific article (publication date: 2002)

RRIDs: A Simple Step toward Improving Reproducibility through Rigor and Transparency of Experimental Methods

scientific article published on May 2016

ReproNim: A Center for Reproducible Neuroimaging Computation to support Resource Discovery, Interoperability, and Replicable Results

Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature

scientific article published on 5 January 2016

STEPHEN J. YOUNG (1938–1999)

SciCrunch: A Cooperative And Collaborative Data, Information, And Resource Discovery Portal For Scientific Communities

SciCrunch: A cooperative and collaborative data and resource discovery platform for scientific communities

Semantic query reformulation

Some analyses of forgetting of pictorial material in amnesic and demented patients

scientific article published in June 1986

Spatial registration, visualization and annotation of mouse brain images at different scales

scholarly article by Maryann E. Martone published 2008 in Frontiers in Neuroinformatics

Subcellular localization of mRNA in neuronal cells. Contributions of high-resolution in situ hybridization techniques

scientific article

Synapse formation on neurons born in the adult hippocampus.

scientific article

Technical aspects of preprint services in the life sciences: a workshop report

scientific article

The FAIR Guiding Principles for scientific data management and stewardship

scientific article (publication date: 15 March 2016)

The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments

scientific article (publication date: 7 October 2013)

The NIDDK Information Network: A Community Portal for Finding Data, Materials, and Tools for Researchers Studying Diabetes, Digestive, and Kidney Diseases

scientific article

The NIF LinkOut broker: a web resource to facilitate federated data integration using NCBI identifiers

scientific article

The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience

scientific article

The Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC).

scientific article published on 6 November 2008

The Neuron Phenotype Ontology: A FAIR Approach to Proposing and Classifying Neuronal Types

scientific article

The Neuron Phenotype Ontology: A FAIR Approach to Proposing and Classifying Neuronal Types

scientific article published on 10 March 2022

The Neuroscience Information Framework (NIF): A Unified Semantic Framework and Associated Tools for Discovery, Integration, and Utilization of Biomedical Data and Resources on the Web

The Neuroscience Information Framework (NIF): A Unified Semantic Framework and Associated Tools for Discovery, Integration, and Utilization of Biomedical Data and Resources on the Web

The Resource Identification Initiative: A Cultural Shift in Publishing

scientific article from The Journal of Comparative Neurology

The Resource Identification Initiative: A Cultural Shift in Publishing

scientific article published on 20 November 2015 from Neuroinformatics

The Resource Identification Initiative: A cultural shift in publishing

scientific article (publication date: 2015) from F1000Research

The Resource Identification Initiative: a cultural shift in publishing

scientific article (publication date: 2016)

The Rigor and Transparency Index Quality Metric for Assessing Biological and Medical Science Methods

scientific article published on 20 October 2020

The Scholarly Commons

journal article from 'The Serials Librarian' published in 2019

The Scholarly Commons - principles and practices to guide research communication ⬇️

journal article from 'Open Science Framework' published in 2017

The Scholarly Commons - principles and practices to guide research communication

The Scholarly Commons - principles and practices to guide research communication ⬇️

report published in 2017

The TRUST Principles for digital repositories

scientific article published on 14 May 2020

The application of energy-filtered electron microscopy to tomography of thick, selectively stained biological samples

scientific article

The cell centered database project: an update on building community resources for managing and sharing 3D imaging data

scientific article

The cell-centered database: a database for multiscale structural and protein localization data from light and electron microscopy

scientific article

The cell: an image library-CCDB: a curated repository of microscopy data

scientific article

The combination of chemical fixation procedures with high pressure freezing and freeze substitution preserves highly labile tissue ultrastructure for electron tomography applications

scientific article published on 14 September 2007

The neuroscience gateway portal: high performance computing made easy.

scientific article published on 21 July 2014

The neuroscience information framework: a data and knowledge environment for neuroscience

scientific article

The possibility and probability of a global neuroscience information framework

Three Dimensional Protein Localization Using High Voltage Electron Microscopy

Three-dimensional electron microscopy reveals new details of membrane systems for Ca2+ signaling in the heart

scientific article

Three-dimensional reconstruction of serial mouse brain sections: solution for flattening high-resolution large-scale mosaics

scientific article

Towards a formalization of disease-specific ontologies for neuroinformatics

scientific article

Towards an ontology for psychosis

Transient decrease in F-actin may be necessary for translocation of proteins into dendritic spines

scientific article published on December 2005

Ultrastructural examination of enkephalin and substance P input to cholinergic neurons within the rat neostriatum ⬇️

scientific article published on October 30, 1992

Uniform resolution of compact identifiers for biomedical data.

scientific article

Using ontologies to define the relation between neurodegenerative disease and associated animal model phenotypes

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