List of works by Wladek Minor

'Hot' macromolecular crystals

scientific article

100 Years later: Celebrating the contributions of x-ray crystallography to allergy and clinical immunology

scientific article

2,3-Difluoro-benzoic acid

scientific article

2,4-Dichloro-benzaldehyde

scientific article

2-(Biphenyl-4-yl)-2,3-dihydroquinazolin-4(1H)-one

article published in 2007

2-Amino-4-(4-chloro-3-methylphenyl)-5-propyl-1,3-thiazolium iodide

3-(1-Methylpiperidinio)-1-propanesulfonate

3-(1-Pyridinio)propanesulfonate and 3-(benzyldimethylammonio)propanesulfonate monohydrate

scientific article

3-(Ethyldimethylammonio)propanesulfonate

3-(Morpholinium-1-yl)propanesulfonate

3-Iodo-L-tyrosine hemihydrate

A Gcn5-Related N-Acetyltransferase (GNAT) Capable of Acetylating Polymyxin B and Colistin Antibiotics in Vitro

scientific article published on 12 December 2018

A close look onto structural models and primary ligands of metallo-β-lactamases

A multi-faceted analysis of RutD reveals a novel family of α/β hydrolases

scientific article

A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats

scientific article

A phenomenological description of the paramagnet-antiferromagnet transition in Cd1-xMnxTe

A public database of macromolecular diffraction experiments

scientific article

A simple method of orientating single crystals on time-of-flight neutron spectrometers

A study on the structure, mechanism and biochemistry of kanamycin B dioxygenase (KanJ) - an enzyme with a broad range of substrates

scientific article published on 27 June 2020

A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1

scholarly article by Arman Mussakhmetov published in September 2018

Absolute configuration from a redetermination of (+)-5-bromo-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione at 118 (2) K

Abstract 2747: EWS-FLI1 reduces RNA Helicase A activity

Albumin-based transport of non-steroidal anti-inflammatory drugs in mammalian blood plasma

scientific article published on 29 May 2020

Alternaria alternata allergen Alt a 1: a unique β-barrel protein dimer found exclusively in fungi

scientific article

An experimental charge density of HEPES.

scientific article published on 12 July 2010

An extremely SAD case: structure of a putative redox-enzyme maturation protein from Archaeoglobus fulgidus at 3.4 A resolution

scientific article

Analysis of solvent content and oligomeric states in protein crystals--does symmetry matter?

scientific article

Antiferromagnetic states in CopMg1−pO (abstract)

Antigenic Determinants of Der p 1: Specificity and Cross-Reactivity Associated with IgE Antibody Recognition.

scientific article

Assessing the accuracy of template-based structure prediction metaservers by comparison with structural genomics structures

scientific article

Asymmetric synthesis and evaluation of a hydroxyphenylamide voltage-gated sodium channel blocker in human prostate cancer xenografts

scientific article

Asymmetric synthesis of 2,3-dihydro-2-arylquinazolin-4-ones: methodology and application to a potent fluorescent tubulin inhibitor with anticancer activity

scientific article

Automatic Recognition of Ligands in Electron Density by Machine Learning

scientific article published on 01 February 2019

Avoidable errors in deposited macromolecular structures: an impediment to efficient data mining

scientific article

Benefits of structural genomics for drug discovery research

scientific article

Biochemical and structural characterization of apolipoprotein A-I binding protein, a novel phosphoprotein with a potential role in sperm capacitation

scientific article

Biophysical analysis of the putative acetyltransferase SACOL2570 from methicillin-resistant Staphylococcus aureus

scientific article

Broad-substrate screen as a tool to identify substrates for bacterial Gcn5-related N-acetyltransferases with unknown substrate specificity

scientific journal article

Catalytic cysteine of thymidylate synthase is activated upon substrate binding

scientific article

Cation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica

scientific article

Characterizing metal-binding sites in proteins with X-ray crystallography.

scientific article

CheckMyMetal: a macromolecular metal-binding validation tool

scientific article

Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins

scientific article

Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

article published in 2018

Comparison of metal-bound and unbound structures of aminopeptidase B proteins from Escherichia coli and Yersinia pestis

scientific article published on 19 April 2020

Continua of interactions between pairs of atoms in molecular crystals

scientific article published on February 2006

Correcting the record of structural publications requires joint effort of the community and journal editors.

scientific article

Correction to: Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

scientific article published on 16 July 2019

Corrigendum to "A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1" [Biochem. Biophys. Res. Commun. 504 (1) (2018 Sep 26) 328-333]

scientific article published on 05 October 2018

Covid-19.bioreproducibility.org: A web resource for SARS-CoV-2-related structural models

scientific article published on 27 September 2020

Crystal Structure of Pseudomonas aeruginosa SPM-1 Provides Insights into Variable Zinc Affinity of Metallo-β-lactamases

scientific article published on 23 January 2006

Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum

scientific article

Crystal structure of 2,6-dichlorobenzaldehyde, C7H4Cl2O

Crystal structure of 6-(4-difluoromethoxy-3-methoxyphenyl)-3(2H)- pyridazinone, C12H10F2N2O3

Crystal structure of RNase T, an exoribonuclease involved in tRNA maturation and end turnover

scientific article

Crystal structure of RhoA-GDP and its functional implications

scientific article

Crystal structure of a putative isochorismatase hydrolase from Oleispira antarctica

scientific article

Crystal structure of a putative transcriptional regulator SCO0520 from Streptomyces coelicolor A3(2) reveals an unusual dimer among TetR family proteins

scientific article

Crystal structure of a transcriptional regulator TM1030 from Thermotoga maritima solved by an unusual MAD experiment

scientific article

Crystal structure of equine serum albumin in complex with cetirizine reveals a novel drug binding site

scientific article

Crystal structure of human complement protein C8gamma at 1.2 A resolution reveals a lipocalin fold and a distinct ligand binding site

scientific article

Crystal structure of soybean lipoxygenase L-1 at 1.4 A resolution

scientific article

Crystal structure of the MACPF domain of human complement protein C8 alpha in complex with the C8 gamma subunit

scientific article

Crystal structures of TM0549 and NE1324--two orthologs of E. coli AHAS isozyme III small regulatory subunit

scientific article

Crystal structures of mite allergens Der f 1 and Der p 1 reveal differences in surface-exposed residues that may influence antibody binding.

scientific article

Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni

scientific article

Crystallization and preliminary X-ray analysis of the cytoplasmic domain of human erythrocyte band 3.

scientific article

Crystallization and preliminary X-ray investigation of lipoxygenase-3 from soybeans

scientific article

Crystallization and preliminary structure analysis of an insect virus with T=4 quasi-symmetry: Nudaurelia capensis ω virus

article by J. Cavarelli et al published 1 February 1991 in Acta Crystallographica Section B: Structural Science

Crystallization at low salt concentration and alkaline pH and preliminary crystallographic data for a monoclinic form of yeast enolase

scientific article

Crystallization of Fe-Si-B metallic glasses studied by X-ray synchrotron radiation

Crystallographic determination of the active site iron and its ligands in soybean lipoxygenase L-1

scientific article published on 01 June 1993

Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin

scientific article

DENZO and SCALEPACK

article

DENZOandSCALEPACK

Data management in the modern structural biology and biomedical research environment

scientific article published in January 2014

Data mining of iron(II) and iron(III) bond-valence parameters, and their relevance for macromolecular crystallography.

scientific article

Data mining of metal ion environments present in protein structures

scientific article

Data to knowledge: how to get meaning from your result.

scientific article

Databases, Repositories, and Other Data Resources in Structural Biology

scientific article

Detect, correct, retract: How to manage incorrect structural models

scientific article published on 7 November 2017

Determination of protein structures--a series of fortunate events

scientific article

Dexamethasone at 119 K

Differences in substrate specificity of V. cholerae FabH enzymes suggest new approaches for the development of novel antibiotics and biofuels

article

Diffraction data analysis in the presence of radiation damage

scientific article

Disodium 4-nitrophenylphosphate hexahydrate

Dissecting the Structural Elements for the Activation of β-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae

scientific article

Double chromodomains cooperate to recognize the methylated histone H3 tail

scientific article (publication date: 22 December 2005)

Double trouble-Buffer selection and His-tag presence may be responsible for nonreproducibility of biomedical experiments.

scientific article

Drug-resistant variants of Escherichia coli thymidylate synthase: effects of substitutions at Pro-254

scientific article

Edc3 function in yeast and mammals is modulated by interaction with NAD-related compounds

scientific article

Energetics of interactions in the solid state of 2-hydroxy-8-X-quinoline derivatives (X = Cl, Br, I, S-Ph): comparison of Hirshfeld atom, X-ray wavefunction and multipole refinements

scientific article published on 15 July 2019

Explanation of neutron diffraction phenomena observed in vibrating piezoelectric crystals

Expression, purification and the 1.8 angstroms resolution crystal structure of human neuron specific enolase.

scientific article

Factors correlating with significant differences between X-ray structures of myoglobin

scientific article

Faculty of 1000 evaluation for Energy landscape of knotted protein folding

Faculty of 1000 evaluation for Genomic responses in mouse models poorly mimic human inflammatory diseases

article

Faculty of 1000 evaluation for Rescuing US biomedical research from its systemic flaws

Faculty of 1000 evaluation for The Current Revolution in Cryo-EM

Findable Accessible Interoperable Re-usable (FAIR) diffraction data are coming to protein crystallography

scientific article published on 29 April 2019

Findable Accessible Interoperable Re-usable (FAIR) diffraction data are coming to protein crystallography

Findable Accessible Interoperable Re-usable (FAIR) diffraction data are coming to protein crystallography

Findable Accessible Interoperable Re-usable (FAIR) diffraction data are coming to protein crystallography

scientific article published on 30 April 2019

Fitmunk: improving protein structures by accurate, automatic modeling of side-chain conformations

scientific article

Function-biased choice of additives for optimization of protein crystallization - the case of the putative thioesterase PA5185 from Pseudomonas aeruginosa PAO1

scientific article

Generating enzyme and radical-mediated bisubstrates as tools for investigating Gcn5-related N-acetyltransferases

scientific article published on 13 July 2017

Glyoxylate reductase as versatile enzymatic system for pharmaceutical and medical use

HKL-3000: the integration of data reduction and structure solution--from diffraction images to an initial model in minutes

scientific article (publication date: August 2006)

Harvesting the high-hanging fruit: the structure of the YdeN gene product from Bacillus subtilis at 1.8 angstroms resolution

scientific article

High temperature behaviour of spin waves in Fe3-xMnxSi

How to use the PSI Structural Genomics Knowledgebase to Enable Research

Human thymidylate synthase is in the closed conformation when complexed with dUMP and raltitrexed, an antifolate drug

scientific article

Identification of unknown protein function using metabolite cocktail screening

scientific article

In situ proteolysis for protein crystallization and structure determination

scientific article

Insight into the 3D structure and substrate specificity of previously uncharacterized GNAT superfamily acetyltransferases from pathogenic bacteria

scientific article

Is too 'creative' language acceptable in crystallography?

scientific article published on 13 August 2010

Kinetic, spectroscopic, and structural investigations of the soybean lipoxygenase-1 first-coordination sphere mutant, Asn694Gly

scientific article published in August 2006

L-Methioninium chloride and L-selenomethioninium chloride at 103 K.

scientific article

Ligand-centered assessment of SARS-CoV-2 drug target models in the Protein Data Bank

scientific article published on 17 May 2020

Magnesium-binding architectures in RNA crystal structures: validation, binding preferences, classification and motif detection

scientific article

Map2mod--a server for evaluation of crystallographic models and their agreement with electron density maps

scientific article

Measurement errors and their consequences in protein crystallography ⬇️

scientific article published on October 23, 2003

Mechanism of N10-formyltetrahydrofolate synthetase derived from complexes with intermediates and inhibitors

scientific article

Mechanism of enolase: the crystal structure of asymmetric dimer enolase-2-phospho-D-glycerate/enolase-phosphoenolpyruvate at 2.0 A resolution

scientific article

Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres

scientific article

Molecular determinants for antibody binding on group 1 house dust mite allergens

scientific article

Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy

scientific article published on 23 July 2020

Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy

scientific article published on 29 September 2020

Molstack - interactive visualization tool for presentation, interpretation, and validation of macromolecules and electron density maps

scientific article

Molstack: A platform for interactive presentations of electron density and cryo-EM maps and their interpretations

scientific article published on 25 October 2019

Multiparametric scaling of diffraction intensities

scientific article (publication date: May 2003)

N,N,N′,N′-Tetrakis(carboxymethyl)-2,2′-(ethylenedioxy)dianilinium dichloride dihydrate

NRMT is an alpha-N-methyltransferase that methylates RCC1 and retinoblastoma protein

scientific article

Neutron Scattering Studies of the "Antiferromagnetic Phase" of Cd1-XMnXTe

Neutron scattering studies of Cd1−xMnxTe (invited)

New surface contacts formed upon reductive lysine methylation: improving the probability of protein crystallization

scientific article

On the evolution of the quality of macromolecular models in the PDB

scientific article published on 20 April 2020

Optimal structure determination from sub-optimal diffraction data

scientific article published in January 2022

Optimization of overexpression of a chaperone protein of steroid C25 dehydrogenase for biochemical and biophysical characterization

scientific article

Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop

scientific article

Phason velocities inTaS2by x-ray diffuse scattering

scientific article published on 01 January 1989

Phosphorylation regulates SIRT1 function.

scientific article

Processing of X-ray diffraction data collected in oscillation mode

scientific article

Protein crystallography for aspiring crystallographers or how to avoid pitfalls and traps in macromolecular structure determination

scientific article

Protein crystallography for non-crystallographers, or how to get the best (but not more) from published macromolecular structures.

scientific article

Protein purification and crystallization artifacts: The tale usually not told

scientific article

Pyrimidine biosynthesis in pathogens - Structures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae

scientific article published on 15 June 2019

Rapid response to emerging biomedical challenges and threats

Recombinant production of enzymatically active male contraceptive drug target hTSSK2 - Localization of the TSKS domain phosphorylated by TSSK2

scientific article

Refining the macromolecular model – achieving the best agreement with the data from X-ray diffraction experiment

scientific article published on 21 September 2018

Regioselectivity of hyoscyamine 6β-hydroxylase-catalysed hydroxylation as revealed by high-resolution structural information and QM/MM calculations

scientific article published on 01 April 2020

Removal of salt from a salt-induced protein crystal without cross-linking. Preliminary examination of "desalted" crystals of phosphoglucomutase by x-ray crystallography at low temperature

article

STUDIES OF FCC HEISENBERG ANTIFERROMAGNETS BY MONTE CARLO SIMULATION ON LARGE SPIN ARRAYS

Safeguarding Structural Data Repositories against Bad Apples

scientific article

Secondary extinction in rotating single-crystal slabs

Serum albumins-unusual allergens

scientific article

Sharing Big Data

scientific article

Single enantiomer of YK-4-279 demonstrates specificity in targeting the oncogene EWS-FLI1.

scientific article

Sperm Lysozyme-Like Protein 1 (SLLP1), an intra-acrosomal oolemmal-binding sperm protein, reveals filamentous organization in protein crystal form.

scientific article

Spin waves in Fe3−xMnxSi ordered alloys

Spin waves in FeAlSi system

Spinning single crystal tof method for structure analysis

Stacks of DMANH+– scaffolding for ribbon shaped Cl−bridged oxonium ions

State-of-the-Art Data Management: Improving the Reproducibility, Consistency, and Traceability of Structural Biology and in Vitro Biochemical Experiments

scientific article published on 01 January 2021

Strategies for macromolecular synchrotron crystallography.

scientific article

Structural Analysis of Der p 1-Antibody Complexes and Comparison with Complexes of Proteins or Peptides with Monoclonal Antibodies

scientific article

Structural analysis of GNAT acetyltransferases and protein acetylation

Structural analysis of a putative aminoglycoside N-acetyltransferase from Bacillus anthracis

scientific article

Structural and biochemical analysis of Bacillus anthracis prephenate dehydrogenase reveals an unusual mode of inhibition by tyrosine via the ACT domain

scientific article published on 21 November 2019

Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins

scientific article

Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1

scientific article

Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes

scientific article

Structural and functional insight into the universal stress protein family

scientific article

Structural and immunologic characterization of Ara h 1, a major peanut allergen

scientific article

Structural and immunologic characterization of Ara h 1, a major peanut allergen

scientific article published in Journal of Biological Chemistry

Structural and immunologic characterization of bovine, horse, and rabbit serum albumins

scientific article

Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members

scientific article

Structural characterization of the putative ABC-type 2 transporter from Thermotoga maritima MSB8.

scientific article

Structural genomics: keeping up with expanding knowledge of the protein universe

scientific article

Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli

scientific article

Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies

scientific article

Structural, functional, and inhibition studies of a Gcn5-related N-acetyltransferase (GNAT) superfamily protein PA4794: a new C-terminal lysine protein acetyltransferase from pseudomonas aeruginosa

scientific article

Structure of Bacillus subtilis YXKO--a member of the UPF0031 family and a putative kinase

scientific article

Structure of Escherichia coli RutC, a member of the YjgF family and putative aminoacrylate peracid reductase of the rut operon

scientific article

Structure of Sindbis virus core protein reveals a chymotrypsin-like serine proteinase and the organization of the virion

scientific article

Structure of a microbial homologue of mammalian platelet-activating factor acetylhydrolases: Streptomyces exfoliatus lipase at 1.9 A resolution

scientific article

Structure of a short-chain dehydrogenase/reductase from Bacillus anthracis

scientific article

Structure of anabolic ornithine carbamoyltransferase from Campylobacter jejuni at 2.7 Å resolution

scientific article

Structure of human thymidylate synthase suggests advantages of chemotherapy with noncompetitive inhibitors

scientific article

Structure of human thymidylate synthase under low-salt conditions

scientific article published on 20 April 2005

Structure of isochorismate synthase DhbC from Bacillus anthracis

scientific article

Structure of the complex of an iminopyridinedione PTP4A3 phosphatase inhibitor with human serum albumin

scientific article published on 25 September 2020

Substrate specificity of mammalian N-terminal α-amino methyltransferase NRMT

scientific article

Synthesis and solid-state study of supramolecular host-guest assemblies: Bis[6-O,6-O'-(1,2:3,4-diisopropylidene-alpha-D-galactopyranosyl)thiophosphoryl] dichalcogenides

scientific article published on 29 May 2008

Targeting a uniquely nonspecific prenyl synthase with bisphosphonates to combat cryptosporidiosis

scientific article

Testosterone meets albumin - the molecular mechanism of sex hormone transport by serum albumins

scientific article published on 17 December 2018

The Enzyme Function Initiative

scientific article

The HP1a disordered C terminus and chromo shadow domain cooperate to select target peptide partners

scientific article

The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years

scientific article published on 22 November 2019

The Structural Biology Knowledgebase - search Online for Protein Sequences, Structures, Functions, Methods and More

The Structural Biology Knowledgebase: a portal to protein structures, sequences, functions, and methods

scientific article

The crystal structure of N(10)-formyltetrahydrofolate synthetase from Moorella thermoacetica

scientific article

The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein CAE31940 from proteobacterium Bordetella bronchiseptica RB50, and evolutionary insight into the NMT1/THI5 family

scientific article

The crystal structure of the AF2331 protein from Archaeoglobus fulgidus DSM 4304 forms an unusual interdigitated dimer with a new type of alpha + beta fold.

scientific article

The future of crystallography in drug discovery

scientific article

The impact of structural genomics: the first quindecennial

scientific article

The major cockroach allergen Bla g 4 binds tyramine and octopamine

scientific article

The many faces of radiation-induced changes

The quality and validation of structures from structural genomics

scientific article

The structural genomics experimental pipeline: insights from global target lists.

scientific article published in August 2004

The structure determination of Sindbis virus core protein using isomorphous replacement and molecular replacement averaging between two crystal forms

scientific article published on 01 July 1992

The structure of pyogenecin immunity protein, a novel bacteriocin-like immunity protein from Streptococcus pyogenes

scientific article

The tetramer structure of the Nervy homology two domain, NHR2, is critical for AML1/ETO's activity

scientific article

The young person's guide to the PDB.

scientific article

To automate or not to automate: this is the question

scientific article

Ultratight crystal packing of a 10 kDa protein

scientific article

Uncovering a calcium-regulated membrane-binding mechanism for soybean lipoxygenase-1.

scientific article

Unmet challenges of structural genomics

scientific article

Using surface-bound rubidium ions for protein phasing

scientific article

Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server.

scientific article

X-ray crystallography over the past decade for novel drug discovery - where are we heading next?

scientific article

X-ray crystallography: Assessment and validation of protein-small molecule complexes for drug discovery

scientific article

X-ray diffraction experiment--the last experiment in the structure elucidation process

scientific article

trans-1-Hydroxycyclopentan-2-aminium chloride

virusMED: an atlas of hotspots of viral proteins

scientific article published on 28 September 2021

Paulina is supported by:

About Paulina

Help