List of works - Richard Nichols

Hybridization and speciation

scientific article published on February 2013

A method for quantifying differentiation between populations at multi-allelic loci and its implications for investigating identity and paternity

scientific article

Gene trees and species trees are not the same

article

DNA profile match probability calculation: how to allow for population stratification, relatedness, database selection and single bands

scientific article published in February 1994

Dates from the molecular clock: how wrong can we be?

scientific article published on 8 December 2006

Y genetic data support the Neolithic demic diffusion model

scientific article

Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis

scientific article

Phylogenetic analysis of varicella-zoster virus: evidence of intercontinental spread of genotypes and recombination

scientific article

Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs

scientific article published on 21 April 2011

Transition-transversion bias is not universal: a counter example from grasshopper pseudogenes

scientific article

'Ghost' alleles of the Mauritius kestrel

scientific article published in February 2000

Collapse of amphibian communities due to an introduced Ranavirus.

scientific article

Deep sequencing of viral genomes provides insight into the evolution and pathogenesis of varicella zoster virus and its vaccine in humans.

scientific article published on 25 October 2013

Ribosomal DNA in the grasshopper Podisma pedestris: escape from concerted evolution

scientific article

Evidence for directional selection at a novel major histocompatibility class I marker in wild common frogs (Rana temporaria) exposed to a viral pathogen (Ranavirus).

scientific article

Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences

scientific article

Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size

scientific article

The role of vicariance vs. dispersal in shaping genetic patterns in ocellated lizard species in the western Mediterranean

article

The persistence of Pliocene populations through the Pleistocene climatic cycles: evidence from the phylogeography of an Iberian lizard

scientific article published in August 2001

Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum.

scientific article

Using nested clade analysis to assess the history of colonization and the persistence of populations of an Iberian Lizard

article

Patterns of colonization in a metapopulation of grey seals

scientific article published in Nature

The origin and evolution of geminivirus-related DNA sequences in Nicotiana.

scientific article published in April 2004

Significant genetic correlations among Caucasians at forensic DNA loci

scientific article published in June 1997

Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids

scientific article

Estimating the Number of Subpopulations (K) in Structured Populations

scientific article published on 17 June 2016

European phylogeography of the common frog (Rana temporaria): routes of postglacial colonization into the British Isles, and evidence for an Irish glacial refugium.

scientific article

Natural selection for rash-forming genotypes of the varicella-zoster vaccine virus detected within immunized human hosts

scholarly article

Effects of population structure on DNA fingerprint analysis in forensic science

scientific article published on 01 April 1991

A molecular phylogeny of African kestrels with reference to divergence across the Indian Ocean

scientific article (publication date: November 2002)

Genomic Prediction of Testcross Performance in Canola (Brassica napus).

scientific article published on 29 January 2016

Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans.

scientific article published in September 2016

Detecting gene conversion: primate visual pigment genes

scientific article published in September 1992

Bringing genetic diversity to the forefront of conservation policy and management

article by Sean M. Hoban et al published 11 January 2013 in Conservation Genetics Resources

Mating patterns, relatedness and the basis of natal philopatry in the brown long-eared bat, Plecotus auritus.

scientific article published in May 2001

What is genetic differentiation, and how should we measure it--GST, D, neither or both?

scientific article published on 13 August 2014

The inexorable spread of a newly arisen neo-Y chromosome

scientific article

Household size is critical to varicella-zoster virus transmission in the tropics despite lower viral infectivity

scientific article

The double origin of Iberian peninsular chameleons

article

Rates of vaccine evolution show strong effects of latency: implications for varicella zoster virus epidemiology

scientific article

Genome size and ploidy influence angiosperm species' biomass under nitrogen and phosphorus limitation

scientific article published on 15 February 2016

Population genetics of STR loci in Caucasians

scientific article published in January 1996

The fire ant social chromosome supergene variant Sb shows low diversity but high divergence from SB

scientific article published on 21 February 2017

Minisatellite mutational processes reduce Fst estimates

article

Unidirectional diploid-tetraploid introgression among British birch trees with shifting ranges shown by restriction site-associated markers

scientific article

Molecular footprints of the Holocene retreat of dwarf birch in Britain

scientific article

The frequency of rDNA variants within individuals provides evidence of population history and gene flow across a grasshopper hybrid zone

scientific article published on 10 January 2008

Molecular phylogeny and morphological change in the Psittacula parakeets

scientific article published on April 2004

Genome-wide characterisation of hepatitis B mutations involved in clinical outcome

article published in 2006

Range expansion and hybridization in Round Island petrels (Pterodroma spp.): evidence from microsatellite genotypes.

scientific article published in August 2010

List of works by Richard Nichols

Hybridization and speciation

A method for quantifying differentiation between populations at multi-allelic loci and its implications for investigating identity and paternity

Gene trees and species trees are not the same

DNA profile match probability calculation: how to allow for population stratification, relatedness, database selection and single bands

Dates from the molecular clock: how wrong can we be?

Y genetic data support the Neolithic demic diffusion model

Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis

Phylogenetic analysis of varicella-zoster virus: evidence of intercontinental spread of genotypes and recombination

Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs

Transition-transversion bias is not universal: a counter example from grasshopper pseudogenes

'Ghost' alleles of the Mauritius kestrel

Collapse of amphibian communities due to an introduced Ranavirus.

Deep sequencing of viral genomes provides insight into the evolution and pathogenesis of varicella zoster virus and its vaccine in humans.

Ribosomal DNA in the grasshopper Podisma pedestris: escape from concerted evolution

Evidence for directional selection at a novel major histocompatibility class I marker in wild common frogs (Rana temporaria) exposed to a viral pathogen (Ranavirus).

Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences

Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size

The role of vicariance vs. dispersal in shaping genetic patterns in ocellated lizard species in the western Mediterranean

The persistence of Pliocene populations through the Pleistocene climatic cycles: evidence from the phylogeography of an Iberian lizard

Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum.

Using nested clade analysis to assess the history of colonization and the persistence of populations of an Iberian Lizard

Patterns of colonization in a metapopulation of grey seals

The origin and evolution of geminivirus-related DNA sequences in Nicotiana.

Significant genetic correlations among Caucasians at forensic DNA loci

Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids

Estimating the Number of Subpopulations (K) in Structured Populations

European phylogeography of the common frog (Rana temporaria): routes of postglacial colonization into the British Isles, and evidence for an Irish glacial refugium.

Natural selection for rash-forming genotypes of the varicella-zoster vaccine virus detected within immunized human hosts

Effects of population structure on DNA fingerprint analysis in forensic science

A molecular phylogeny of African kestrels with reference to divergence across the Indian Ocean

Genomic Prediction of Testcross Performance in Canola (Brassica napus).

Reconstructing the emergence of a lethal infectious disease of wildlife supports a key role for spread through translocations by humans.

Detecting gene conversion: primate visual pigment genes

Bringing genetic diversity to the forefront of conservation policy and management

Mating patterns, relatedness and the basis of natal philopatry in the brown long-eared bat, Plecotus auritus.

What is genetic differentiation, and how should we measure it--GST, D, neither or both?

The inexorable spread of a newly arisen neo-Y chromosome

Household size is critical to varicella-zoster virus transmission in the tropics despite lower viral infectivity

The double origin of Iberian peninsular chameleons

Rates of vaccine evolution show strong effects of latency: implications for varicella zoster virus epidemiology

Genome size and ploidy influence angiosperm species' biomass under nitrogen and phosphorus limitation

Population genetics of STR loci in Caucasians

The fire ant social chromosome supergene variant Sb shows low diversity but high divergence from SB

Minisatellite mutational processes reduce Fst estimates

Unidirectional diploid-tetraploid introgression among British birch trees with shifting ranges shown by restriction site-associated markers

Molecular footprints of the Holocene retreat of dwarf birch in Britain

The frequency of rDNA variants within individuals provides evidence of population history and gene flow across a grasshopper hybrid zone

Molecular phylogeny and morphological change in the Psittacula parakeets

Genome-wide characterisation of hepatitis B mutations involved in clinical outcome

Range expansion and hybridization in Round Island petrels (Pterodroma spp.): evidence from microsatellite genotypes.