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List of works by Gregory Stupp

(13)C Metabolomics: NMR and IROA for Unknown Identification

scientific article (publication date: August 2016)

A comprehensive and scalable database search system for metaproteomics

scientific article

A comprehensive and scalable database search system for metaproteomics

An overview of methods using (13)C for improved compound identification in metabolomics and natural products

scientific article

Author response: Wikidata as a knowledge graph for the life sciences

scholarly article, peer review and author response published on 24 January 2020

Chemical detoxification of small molecules by Caenorhabditis elegans.

scientific article

ChlamBase: a curated model organism database for the Chlamydia research community.

correction

High-performance web services for querying gene and variant annotation

scientific article (publication date: 6 May 2016)

Isotopic ratio outlier analysis global metabolomics of Caenorhabditis elegans

scientific article published on 4 December 2013

Metabolomics and Natural-Products Strategies to Study Chemical Ecology in Nematodes

scientific article

Metaproteomics of colonic microbiota unveils discrete protein functions among colitic mice and control groups

scientific article published on 10 January 2018

Metaproteomics of colonic microbiota unveils discrete protein functions among colitic mice and control groups

Mondo: Unifying diseases for the world, by the world

MyGene.info and MyVariant.info: Gene and Variant Annotation Query Services

article

Quantitative Metaproteomics and Activity-Based Probe Enrichment Reveals Significant Alterations in Protein Expression from a Mouse Model of Inflammatory Bowel Disease

scientific article

Quantitative Metaproteomics and Activity-based Protein Profiling of Patient Fecal Microbiome Identifies Host and Microbial Serine-type Endopeptidase Activity Associated With Ulcerative Colitis

scientific article published on 13 January 2022

Structured Reviews for Data and Knowledge Driven Research

Structured reviews for data and knowledge-driven research

scientific article published on 01 January 2020

Triflic Acid Treatment Enables LC-MS/MS Analysis of Insoluble Bacterial Biomass

scientific article published on 08 August 2018

Triflic acid treatment enables LC-MS/MS analysis of insoluble bacterial biomass

Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation

scholarly article from Zenodo

Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation

scientific article published on 25 May 2019

Whole-genome sequencing and phenotypic analysis of Bacillus subtilis mutants following evolution under conditions of relaxed selection for sporulation

scientific article

WikiGenomes: an open Web application for community consumption and curation of gene annotation data in Wikidata

scientific article

Wikidata as a FAIR knowledge graph for the life sciences

scholarly article posted as a preprint in BioRxiv on 11 February 2020

Wikidata as a knowledge graph for the life sciences

scientific article published on 17 March 2020

Wikidata as an intuitive resource towards semantic data modeling in data FAIRification

scholarly article by Annika Jacobsen published in December 2018

¹³C NMR metabolomics: applications at natural abundance

scientific article