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Authors whose works are in public domain in at least one jurisdiction

List of works by Gregory Stupp

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High-performance web services for querying gene and variant annotation

scientific article (publication date: 6 May 2016)
Wikidata as a knowledge graph for the life sciences

scientific article published on 17 March 2020
WikiGenomes: an open Web application for community consumption and curation of gene annotation data in Wikidata

scientific article
An overview of methods using (13)C for improved compound identification in metabolomics and natural products

scientific article
Isotopic ratio outlier analysis global metabolomics of Caenorhabditis elegans

scientific article published on 4 December 2013
Whole-genome sequencing and phenotypic analysis of Bacillus subtilis mutants following evolution under conditions of relaxed selection for sporulation

scientific article
¹³C NMR metabolomics: applications at natural abundance

scientific article
Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation

scientific article published on 25 May 2019
A comprehensive and scalable database search system for metaproteomics

scientific article
Chemical detoxification of small molecules by Caenorhabditis elegans.

scientific article
Quantitative Metaproteomics and Activity-Based Probe Enrichment Reveals Significant Alterations in Protein Expression from a Mouse Model of Inflammatory Bowel Disease

scientific article
Metabolomics and Natural-Products Strategies to Study Chemical Ecology in Nematodes

scientific article
(13)C Metabolomics: NMR and IROA for Unknown Identification

scientific article (publication date: August 2016)
ChlamBase: a curated model organism database for the Chlamydia research community.

correction
Metaproteomics of colonic microbiota unveils discrete protein functions among colitic mice and control groups

scientific article published on 10 January 2018
Wikidata as an intuitive resource towards semantic data modeling in data FAIRification

scholarly article by Annika Jacobsen published in December 2018
MyGene.info and MyVariant.info: Gene and Variant Annotation Query Services

article
Author response: Wikidata as a knowledge graph for the life sciences

scholarly article, peer review and author response published on 24 January 2020
Triflic Acid Treatment Enables LC-MS/MS Analysis of Insoluble Bacterial Biomass

scientific article published on 08 August 2018
Structured reviews for data and knowledge-driven research

scientific article published on 01 January 2020
Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation

scholarly article from Zenodo
Wikidata as a FAIR knowledge graph for the life sciences

scholarly article posted as a preprint in BioRxiv on 11 February 2020
Mondo: Unifying diseases for the world, by the world

Quantitative Metaproteomics and Activity-based Protein Profiling of Patient Fecal Microbiome Identifies Host and Microbial Serine-type Endopeptidase Activity Associated With Ulcerative Colitis

scientific article published on 13 January 2022
Metaproteomics of colonic microbiota unveils discrete protein functions among colitic mice and control groups

Triflic acid treatment enables LC-MS/MS analysis of insoluble bacterial biomass

A comprehensive and scalable database search system for metaproteomics

Structured Reviews for Data and Knowledge Driven Research

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