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List of works by David J. Wild

Advances in cheminformatics methodologies and infrastructure to support the data mining of large, heterogeneous chemical datasets

scientific article

An activity canyon characterization of the pharmacological topography

scientific article (publication date: 2016)

Assessing drug target association using semantic linked data

scientific article

Challenges for chemoinformatics education in drug discovery

scientific article

Chem2Bio2RDF: a semantic framework for linking and data mining chemogenomic and systems chemical biology data

scientific article (publication date: 2010)

Chemical data mining of the NCI human tumor cell line database

scientific article

Cheminformatics for the masses: a chance to increase educational opportunities for the next generation of cheminformaticians

scientific article published on July 5, 2013

Comparing bioassay response and similarity ensemble approaches to probing protein pharmacology

scientific article published on September 8, 2011

Counting clusters using R-NN curves

scientific article published on 30 June 2007

Discovering Associations in Biomedical Datasets by Link-based Associative Classifier (LAC)

scientific article published on December 5, 2012

Electronic laboratory notebooks progress and challenges in implementation

scientific article published on 16 April 2013

Enhanced ranking of PknB Inhibitors using data fusion methods

scientific article published on January 14, 2013

Ensemble feature selection: consistent descriptor subsets for multiple QSAR models

scientific article published on 4 April 2007

Ensemle Feature Selection: Consistent Descriptor Subsets for Multiple QSAR Models

Extraction of CYP chemical interactions from biomedical literature using natural language processing methods

scientific article published on February 2009

Fast rule-based bioactivity prediction using associative classification mining

scientific article published on November 23, 2012

Finding Complex Biological Relationships in Recent PubMed Articles Using Bio-LDA

scientific article published on March 23, 2011

Grand challenges for cheminformatics

scientific article

Improving integrative searching of systems chemical biology data using semantic annotation

scientific article (publication date: 8 March 2012)

Improving usability and accessibility of cheminformatics tools for chemists through cyberinfrastructure and education

scientific article published on January 2011

In-silico predictive mutagenicity model generation using supervised learning approaches

scientific article published on May 15, 2012

Introducing Cheminformatics

book from 2012

Laboratory Informatics Tools Integration Strategies for Drug Discovery: Integration of LIMS, ELN, CDS, and SDMS

scientific article published on August 15, 2012

Linked Data in Drug Discovery

article

Mining Relational Paths in Integrated Biomedical Data

scientific article published on December 6, 2011

Mining large heterogeneous data sets in drug discovery

scientific article published on August 28, 2009

Novel Phenotypic Outcomes Identified for a Public Collection of Approved Drugs from a Publicly Accessible Panel of Assays

scientific article

Optimizing drug–target interaction prediction based on random walk on heterogeneous networks

scientific article (publication date: 2015)

PIBAS FedSPARQL: a web-based platform for integration and exploration of bioinformatics datasets

scientific article published on 20 September 2017

Practice and Challenges of Building a Semantic Framework for Chemogenomics Research

scientific article

PubChem BioAssays as a data source for predictive models

scientific article (publication date: 2010)

PubChem as a Source of Polypharmacology

scientific article

PubChemSR: a search and retrieval tool for PubChem

scientific article

RepTB: a gene ontology based drug repurposing approach for tuberculosis

scientific article

Semantic inference using chemogenomics data for drug discovery

scientific article published on June 23, 2011

Systems chemical biology and the Semantic Web: what they mean for the future of drug discovery research

scientific article published on 29 December 2011

The ChEMBL database as linked open data

scientific article (publication date: 2013)

Userscripts for the life sciences

scientific article

Videoconferencing and other distance education techniques in chemoinformatics teaching and research at Indiana University

scientific article published on 01 March 2006

WENDI: A tool for finding non-obvious relationships between compounds and biological properties, genes, diseases and scholarly publications

scientific article (publication date: 20 August 2010)

Web service infrastructure for chemoinformatics

scientific article published on 29 June 2007

edge2vec: Representation learning using edge semantics for biomedical knowledge discovery

scientific article published on 10 June 2019