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List of works by Filipe O. Costa

A reliable DNA barcode reference library for the identification of the North European shelf fish fauna.

scientific article

Application of RAPD DNA fingerprinting in taxonomic identification of amphipods: a case-study with Gammarus species (Crustacea: Amphipoda)

article

Assembling and auditing a comprehensive DNA barcode reference library for European marine fishes.

scientific article

BAGS: an automated Barcode, Audit & Grade System for DNA barcode reference libraries

scientific article published on 30 September 2020

Benchmarking the discrimination power of commonly used markers and amplicons in marine fish (e)DNA (meta)barcoding

scientific article published in 2024

Biological identifications through DNA barcodes: the case of the Crustacea

article

Contrasting morphological and DNA barcode-suggested species boundaries among shallow-water amphipod fauna from the southern European Atlantic coast

scientific article published on 21 October 2016

DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

scientific article published on 27 April 2019

DNA barcoding for species assignment: the case of Mediterranean marine fishes

scientific article

DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities

scientific article published on 15 November 2017

DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe

scientific article (publication date: 29 November 2016)

Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates

scientific article published on 13 April 2019

Detection and monitoring of invertebrate non-indigenous species through DNA metabarcoding in a recreational marina of the Northwest of Portugal

scientific article published on 17 June 2022

Distribution and species identification in the crustacean isopod genus Dynamene Leach, 1814 along the North East Atlantic-Black Sea axis

scientific article (publication date: 23 November 2016)

Enhanced primers for amplification of DNA barcodes from a broad range of marine metazoans

scientific article

From 13 to 22 in a second stroke: revisiting the European Eumida sanguinea (Phyllodocidae: Annelida) species complex ⬇️

scientific article published on 19 January 2022

How oogenesis analysis combined with DNA barcode can help to elucidate taxonomic ambiguities: a polychaete study-based approach

scientific article published on 01 August 2020

Investigating the molecular systematic relationships amongst selectedPlesionika(Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea

scientific article published in 2012

Macrozoobenthos monitoring in Portuguese transitional waters in the scope of the water framework directive using morphology and DNA metabarcoding

scientific article published in 2023

Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life

scientific article published in 2021

Molecular and morphometric analyses identify new lineages within a large Eumida (Annelida) species complex ⬇️

scientific article published on 9 December 2019

Molecular diversity within the genus <i>Laeonereis</i> (Annelida, Nereididae) along the west Atlantic coast: paving the way for integrative taxonomy

scientific article published on 27 May 2021

Multigene molecular systematics confirm species status of morphologically convergent Pagurus hermit crabs

scientific article (publication date: 2011)

Natural history and molecular evolution of demersal Mediterranean sharks and skates inferred by comparative phylogeographic and demographic analyses

scientific article published in 2018

New insights into molecular evolution: prospects from the Barcode of Life Initiative (BOLI).

scientific article

Perchlorate in fish from a contaminated site in east-central Texas

scientific article

Persistence of phylogeographic footprints helps to understand cryptic diversity detected in two marine amphipods widespread in the Mediterranean basin

scientific article published on 24 November 2018

Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities.

scientific article

Reappraisal of the hyperdiverse ⬇️

scientific article published on 17 November 2022

Revealing the diversity of the green Eulalia (Annelida, Phyllodocidae) species complex along the European coast, with description of three new species ⬇️

scientific article published on 13 January 2023

Revision and annotation of DNA barcode records for marine invertebrates: report of the 8th iBOL conference hackathon

scientific article published in 2021

Starting a DNA barcode reference library for shallow water polychaetes from the southern European Atlantic coast

scientific article published on 30 June 2015

Surveillance of non-indigenous invertebrate species through DNA metabarcoding in recreational marinas in the North and Center of Portugal

scientific article published on 04 March 2021

Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca).

scientific article

Taxonomy, distribution and ecology of the order Phyllodocida (Annelida, Polychaeta) in deep-sea habitats around the Iberian margin

scholarly article by Ascensão Ravara published in March 2017

The Future of DNA Barcoding: Reflections from Early Career Researchers

scientific article published on 09 July 2021

The curious and intricate case of the European <i>Hediste diversicolor</i> (Annelida, Nereididae) species complex, with description of two new species

scientific article published in 2022

The small polychaete Platynereis dumerilii revealed as a large species complex with fourteen MOTUs in European marine habitats

scientific article published on 04 March 2021

Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf

scientific article published on 6 February 2014

Why We Need Sustainable Networks Bridging Countries, Disciplines, Cultures and Generations for Aquatic Biomonitoring 2.0: A Perspective Derived From the DNAqua-Net COST Action

scientific article published in 2018

With a little help from DNA barcoding: investigating the diversity of Gastropoda from the Portuguese coast

scientific article published on 15 February 2016

eDNAqua-Plan—Standardisation Overview for eDNA Sequencing of Aquatic Organisms and the Downstream Data Ecosystem

scientific article published in 2024

Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates

scientific article published in 2021

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